Peromyscus leucopus (white-footed mouse): 114684038
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Entry
114684038 CDS
T07241
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04140
Autophagy - animal
pleu04211
Longevity regulating pathway
pleu05010
Alzheimer disease
pleu05014
Amyotrophic lateral sclerosis
pleu05016
Huntington disease
pleu05017
Spinocerebellar ataxia
pleu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114684038
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
114684038
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
114684038
05014 Amyotrophic lateral sclerosis
114684038
05016 Huntington disease
114684038
05017 Spinocerebellar ataxia
114684038
05022 Pathways of neurodegeneration - multiple diseases
114684038
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pleu01009
]
114684038
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114684038
03029 Mitochondrial biogenesis [BR:
pleu03029
]
114684038
Protein phosphatases and associated proteins [BR:
pleu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114684038
Membrane trafficking [BR:
pleu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
114684038
Mitochondrial biogenesis [BR:
pleu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
114684038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
114684038
NCBI-ProteinID:
XP_028714301
LinkDB
All DBs
Position
2:30773998..30821518
Genome browser
AA seq
1587 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRAPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSDYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLNEHEGAEKTEMKRSSEL
VLSPDMPRTTNTSLLTSFHKSVEHVTPDPTNAERGKELRESCQSTVQQEEASVDDKDSDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPKIIQPFILECHQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVRIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFKGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKVSTSQASPQSAASPRIESTTT
TSPKTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETISHPNAEQTIHQASLDLDSLA
ESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTSARGK
EGFGDRAALHVQLEKCRVAAQESHVSIQTIKEDLCHLRTFVQKEQCDLSNSLKCTAVEIR
NIIEKVKCSLEITLKEKHQKELQSLKNEYECKLDALVKDSEENVNKIKKLKGDLVSLEEV
LQNKDNEFALIKREKDAVIFMQHEKDQKLLEMENIMHTQNCEIKELKQSREMVLEDMKKL
HVENDRKIESLRTEFQCLEQSHLKELEDAMHVRHTHEFEKVMTDHKVSLEKLKSENQQRI
DQILESHASTIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKLLLEESRTQQ
KETLKSLLEQETENLRTEISKLNQKIHDNNENYQVGLSELRALMTIEKDQCISELISRHE
EESNILKAELDNVTSLHHQAFEIEKNLKEQIVELQSKLNSELNALERQKDEKITQQEEKY
EALIQNLEKDKEKLVMSHEQDKEQLIQKLTCEKDEAVQTALDEFKLERELVEKELLEKIK
HLENQVAKSPAFESSREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLI
AEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKL
EEEVSKLRTSSFIPSAPLVAAPELYGACAPELPGETERSAVETADEGRVDSAMETSMMSV
QENMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLV
LIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVMEKEYCQA
KKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtgttcctggttaacactgggaccactttgacatttgacactgagcta
actgtgcaaactgtggctgaccttaagcatgccattcaaagcaaatacaagattgctatt
cagcaccaggtgctagtggtcaatggaggagaatgcatggctgcagatcgaagagtgtgt
acctacagcgctggaacggacacaaatccaatttttctttttaataaagaaatgatctta
tgtgaccgtgcacctgctattcctaaaactaccttttcaacagaaaatgacatggaaata
aaagttgaggaatcccttatgatgcctgcagtttttcatactgttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaagctttgctctttctgtgaaggtcttgtc
catgatgaacatcttcagcaccaaggctgggctgcaatcatggccaatctggaggactgt
tcaaattcataccaaaagcttcttttcaagtttgaaagtatttattcagattatctgcaa
tccatagaagacatcaagttaaaacttactcatttaggaactgcggtctcagtgatggcc
aagattccactgttggagtgcctaaccagacatagctacagggaatgtttgggaagactg
gactctttaaatgaacatgaaggcgcagagaaaactgagatgaaaagatcctctgaactg
gtgctctctcctgatatgcctagaacaactaacacatctttgttaacctcatttcacaag
tcagtggagcatgtaactccagatcccaccaatgctgaacgtggcaaagaacttagggaa
tcttgtcaaagtactgtccagcaagaagaagcttcagtagacgataaagacagtgatcta
cctttttttaatgtttccttgttagactggataaatgttcaagatagacccaatgatgtg
gaatctttggtcaggaagtgctttgattctatgagcaggcttgacccaaagattattcaa
ccatttatcttagaatgccatcaaactattgccaaacttgataatcagaatatgaaagcc
attaaagggcttgaagataggctatatgccctggaccagatgattgctagctgtggccgg
ctggtaaatgaacagaaagagcttgctcagggatttttagctaatcaaatgagagctgaa
aacttgaaggatgcatctgtgttgcctgatctgtgcctgagtcatgcaaatcagctaatg
attatgttgcaaaaccacagaaaattgttggatattaaacagaagtgtaccactgccaaa
caagagctagcaaacaatctacatgtcagactgaagtggtgttgctttgtgatgcttcat
gctgatcaagatggagaaaaactgcaagcactgctccgccttgtgatagagctgttagaa
agagtcagaattgtcgaggctcttagcacagttccgcagatgtattgcctagctgttgtt
gaggttgtaaggaggaaaatgttcattaaacactacagagagtgggctggtgctctagtc
aaagatgggaaacaattgtatgaagctgaaaagtcaaaaagggaatcctttgggaaatta
tttaggaaatcctttttaagaaaccgtctgtttaagggactggactcttggcccccctca
ttttgtactcagaagcctcgaaaatttgactgtgaacttccagatatatcattaaaagat
ttacagtttcttcaatcattttgtccttcagaagtgcagccgttcctcagggttccctta
ctttgtgactttgagcctttacaccagcatgtacttgccctacataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatctgctgaatgaacaaaaggtg
tccacaagtcaggcatccccacagtcggctgcttctccaaggatagaaagtacaactact
acctcaccaaaaactcctcctccactaactgttcaggatcccttatgcccagcagtgtgt
cccttagaagaattatctccagatagcattgatgctcatacatttgattttgaaaccatc
tcccatccaaatgcagaacaaactattcaccaagcttcgttagacttggactcattagca
gaaagtcctgagtctgattttatgtctgctgtgaatgagtttgtgattgaagaaaattta
tcatctccaaaccctataagtgatccacaaagtccagaaatgatggtggagtcactttat
tcatcagtcatcaatgcaatagatagtaggcgcatgcaggacacaagtgcacgtggaaaa
gaggggtttggagatcgtgctgctctgcatgtccaactggagaaatgcagagttgctgcc
caagagtctcacgtcagtatacaaaccatcaaggaagatctgtgccacctcagaacattt
gtacaaaaagaacagtgtgacttatcaaattctttaaaatgtacagcagtagaaataaga
aacattattgaaaaagtaaaatgctctctagaaataacactaaaggaaaaacatcagaaa
gaactccaatctttaaaaaatgagtatgaatgtaaacttgatgctctagtaaaagacagt
gaagaaaatgtaaataaaattaaaaaattgaaaggagatttagtatcccttgaagaggtt
ttacagaataaagacaatgaatttgctttgattaaacgtgaaaaggacgctgtcatcttc
atgcaacatgaaaaagatcagaagttattagagatggaaaatataatgcatactcaaaat
tgtgaaattaaagaactaaagcagtcacgagagatggtgttagaagacatgaaaaagcta
catgttgaaaatgataggaaaatagaatcactgagaaccgaatttcagtgcttagagcaa
agccacctaaaggaattagaggatgcaatgcatgtcaggcacacacatgaatttgagaaa
gttatgacagaccacaaagtgtctttggagaaattaaaaagtgaaaatcaacaaagaatt
gaccagatactggaatctcatgcctcaactatccaggaaaaagaacaacagctgcaggaa
ttgaaactcaaggtttctgatttgtcagacatgaggtgtaaattagaggttgaacttgcg
ttaaaagaagcagaaactgatgagataaaactcttgttggaagagagtagaacacagcag
aaggagactttgaagtctctccttgaacaagagacagaaaatttgagaacagaaataagt
aaactaaaccaaaagattcatgataataatgagaattatcaagtgggcttatcagagtta
agagctttaatgacaattgaaaaagatcagtgcatttcagagttaattagtagacatgaa
gaagaatctaatatacttaaggctgaattagacaatgtaacatctttgcatcaccaagca
tttgaaatagaaaaaaaccttaaagaacaaatagttgaactgcagagtaaattgaattca
gaactgaatgcgcttgaaagacaaaaagatgaaaaaataacccagcaagaagagaagtat
gaggctcttatccagaaccttgagaaagacaaggagaaactggtcatgagccacgaacaa
gacaaagaacagctaattcagaaacttacttgtgaaaaagatgaagctgttcaaactgca
ctagatgaatttaaattggagagagaacttgttgagaaagagttattagaaaaaattaaa
catcttgagaatcaagtagccaaaagtcctgcctttgaatcatccagagaagattcttca
agcttagttgctgaacttcaagagaagcttcaggaagaaaaagctaagtttctagaacag
cttgaagaacaagaaaaaagaaagaatgaagaaatgcaaaatgttcgaacatctttaatt
gctgaacaacagaccaattttaacactgttttaacaagagagaaaatgaggaaagaaaac
attataaatgatcttagtgataagttaaaaagtacaatgcaacaacaagagcgtgataaa
gatttgatagagtcactttctgaggatcgagctcgtttgcttgaagaaaagaaaaagctt
gaagaagaagtgagtaaactgcgtactagcagttttattccctcagcacctctggttgca
gccccagagctttatggagcttgtgcacctgagctcccaggtgagacagagagatcagcc
gtggagacagcagatgaaggaagagtggactcggcaatggagacaagcatgatgtctgtt
caagaaaacatgctatctgaagagaaacagaggatcatgcttctagaacggacattgcag
ttgaaggaagaagaaaacaagcggttaaatcaaagactgatgtctcagagcatgtcctca
gtatcttcacggcattctgaaaaaatagccattcgagattttcaggtgggagatttggtt
ctcatcatcctagatgagcggcatgacaattatgtgttgtttactgttagtcctactttg
tattttctgcattcagagtctcttcctgccctggacctcaaaccaggtgagggagcttca
ggtgcatctagaagaccctgggtccttggaaaagtaatggaaaaggaatattgtcaagcc
aaaaaggcacaaaacagatttaaagttcctttggggacaaagttttacagagtgaaagct
gtgtcatggaataagaaagtatag
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integrated database retrieval system
