Peromyscus leucopus (white-footed mouse): 114684331
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Entry
114684331 CDS
T07241
Symbol
Shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
114684331 (Shank1)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
114684331
NCBI-ProteinID:
XP_028714672
LinkDB
All DBs
Position
1:165878682..165927805
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AA seq
2167 aa
AA seq
DB search
MTHSPATSEDEERHSASECPEGGSESDSSPDGPGRGPQGTRGPGSGTPGNLASTRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGTPGAGLTVPPALLRANSDTSMALPDWMVFSAPGASSSGTPGPTSGPQGQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQGEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGRQESRSDKAKRLFRHYTVGSYDSFDAPSLINGIDSGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKASQQAKRLPPP
AISLRSKSMTSELEEMVSPWKKKFEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQT
ISASEGPGPGGLASLGKHRPKGFFATESSFDPHHRSQPSYDRPSFLPPGPGLMLRQKSIG
AAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGG
PFNPGSGGPLSASSPSSFDGPSPPDTRGGGREKSLYHSGALPPAHHHPPHHHHHHAPPPQ
PHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTSGAPSPSHHSSSGG
SSGPTQATALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGSLPPASSPT
SPALPRPEPPPAGPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPDGAGGGGS
SPSPAPATSPVPPSPSPVPTPGSPSGPATLDFTSQFGAALVGAARREGGWQNEARRRSTL
FLSTDAGDEDGGDSGLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESGGSSGGYGAYAAG
SRAYGGSGSSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSDGGGTPQP
PPRPPSPRYDAPPPTLHHHSPHSPHSPHARHEPVLRLWGDPARRELGYRAGLGSQEKALP
ASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPTPLPGVSKAWRTAAPEEPERLPLHVRF
LENCQARPPAAGARGSSTEDGPGVPPPSPRRVLPASPTSPRVSEENGLPLLVLPPPAPSV
DVDDGEFLFAEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPSPATPLPAAPPPAVAAAP
PTLDSTASSLTSYDSEVATLTQGAPTAPGDTPAPGPPAPAAPAPPAPQPGPDPPPGTDSG
IEEVDSRSSSDHPLETISSASTLSSLSAEGGGNTGGVAGGGAGVASGTELLDTYVAYLDG
QAFGGSGTPGPPYPPQLMTPSKLRGRALGAGGNLRPGPSGGLRDPVTPTSPTVSVTGAGT
DGLLALSACSGPSTAGVAGGPVAVEPEVPPVPLPTASSLPRKLLPWEEGPGPPPPPLPGP
LSQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSTDSHHGGASYIPE
RTSSLQRQRLSEDSQTSLLSKPSSSIFQNWPKPPLPPLPTGSGVSSSTAAAPGAISPSAS
SASASTRHLQGVEFEMRPPLLRRAPSPSLLPASDHKVSPAPRPSSLPILPSGPLYPGLFD
IRSSPTGGAGGSADPFAPVFVPPHPGISGGLGGALSGASRSLSPTRLLSLPPDKPFGAKP
LGFWTKFDVADWLEWLGLSEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRA
LKFFLER
NT seq
6504 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgacaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagaatccgacagctccccagacgggccagggagaggcccccaggggact
cggggcccgggcagcggaacacctggtaacctggcctctacccgaggcctccagggacgc
tccatgtctgtccccgacgacgcccacttcagcatgatggttttcaggattggcatccct
gacttgcaccagacgaaatgcctgcgcttcaaccctgatgccaccatctggacagccaaa
cagcaggtactgtgtgccctgagtgagagcctacaggatgtgcttaactacggactgttc
cagccggccacctcaggccgggatgccaacttcctggaagaagagaggctgctaagagag
tacccccagtcctttgaaaagggggtaccctacctggagttccgctacaagacccgagtc
tacaaacagaccaacctggatgagaaacagctggccaaattgcacacgaagacggggttg
aagaagttcctggaatatgtgcagctcgggacgtccgacaaggtggcaaggctgctggac
aaggggctggaccccaattaccatgactcagattcaggagagacacctttgaccctggcg
gcccagactgaaggctcagtagaggtgattcgaacgctgtgcctgggtggggctcacata
gacttcagggcccgggatggcatgacagcgctgcacaaggctgcatgtgctcggcactgc
ctggcactcacggcacttctggaccttgggggctcccccaactacaaggaccgccgaggg
ctgacccccctgttccacacagctatggtggggggcgatccccgctgctgcgagctgctt
ctgtacaacagggcccagctgggcattgcggatgagaacggctggcaggaaatccaccag
gcctgccaacggggccactctcagcacctggaacacctgctcttctatggggctgagcct
ggagcccagaatgcctcaggaaacacagccctgcacatctgtgctctctacaacaaggag
acctgtgccaggatcctcctttatcgtggagcaaacaaggatgtgaaaaataataacgga
cagacacccttccaggtggctgtgattgctgggaattttgagctgggggagctgatccgt
aaccatcgagaacaggatgtggtacccttccaggagtcccccaagtatgcagcccggcgt
cggggaaccccaggtgcaggcctgactgtgcctccagcactgctgcgagctaacagcgac
acaagcatggccctgcctgactggatggtgttttcggccccaggggcctcatcatctggg
acccctggccctacctcaggaccccagggccagtcacagccctcagcccccagcactaag
ctcagtagtgggaccctccgaagtgccagcagcccccgaggtgcccgggcacgctcccca
tcccgggggagacatcccgaagatgccaagagacagcctcgaggccggcccagctccagc
gggacaccccgagaagggccggctgggggaactgggggctcagggggccctgggggctcc
ctgggcagcagaggcagacgtaggaagctctattcagcggtacccggacgttccttcatg
gccgtgaagtcataccaggcgcaaggcgagggggagatctctctgagtaaaggcgagaag
atcaaagtgctcagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgagtt
ggctggttcccctctgactgcctagaagaggtggcaaaccgctcccaggagggaagacaa
gaaagccgaagcgacaaggcaaagagactcttcaggcattacacagtgggttcctacgac
agcttcgatgccccaagtctgatcaatgggattgactcagggagtgattacatcatcaag
gagaagacagtcttactgcagaagaaggacagtgaggggttcgggttcgtgctgcggggg
gccaaggcgcagacccccatcgaggaattcacccccaccccggccttcccggcgctgcag
tacctcgagtctgtggacgagggtggcgtggcatggcgggctggactacgaatgggagac
ttcctcatcgaggtgaatggacagaatgtagtaaaggttggccaccgtcaggtggtcaac
atgatccgccagggaggcaacacactgatggtcaaggtggtgatggtgaccagacaccca
gacatggacgaggccgtccacaagaaagcatcccagcaggctaagcggctcccgccccca
gccatctccctgcgttccaagtctatgacctcagagctggaggaaatggtctccccctgg
aagaagaaatttgaatatgaacaacagcctgcgccggtgcccagcatggagaaaaagcgg
actgtgtatcagatggcactcaacaaactggatgagatcttggcggctgctcagcagacc
atcagtgcaagtgagggtcctgggcctggtggcctcgcgtccctgggcaagcaccggccc
aaaggattctttgccactgagtcaagctttgatccccaccaccgctcccagccaagttac
gaccggccttccttcctgcctcctggacctggccttatgctccggcagaagtctattggg
gctgcggaagatgacagaccctacttagcacccccagccatgaaattcagccgtagtctg
tctgtccccggttcagaggacatacccccaccccccaccacatccccaccagaacctccc
tacagcacacctccggccccctcctcttctggccgcctcactccctcccctcggggaggc
cccttcaaccccggttctgggggtcccctctcggcctcctccccttcatctttcgatggg
ccatctcctcctgacacccgtggtgggggcagagagaagagcctgtatcacagtggagcc
ctaccccctgcccatcatcatccacctcatcatcaccatcatcacgccccacctccacag
ccccaccatcaccatgcacaccctcctcaccccccggagatggagacaggaggttccccc
gacgatcccccacctcgattggccctgggaccccagcctagccttcgaggctggcggggc
ggaggacccagcccaacctcaggggccccatcgccttcccaccacagtagcagcggaggc
agcagcggccccactcaggctaccgccctgcgctacttccagctgcccccgagggcggcc
agtgcagctatgtacgtgcctgctcgctcgggccgaggtcgcaagggcccactggtcaag
cagaccaaagtggaaggcgagccccagaagggcagcctccctcctgcgtcctccccaaca
tccccggcgttgccacggcctgaaccacctccggccgggccgtcggagaaaaattccatc
cccatccctaccattatcatcaaagccccatccaccagtagcagcggccgcagcagccag
gggagcagcacagaggccgagccccccacccagcccgacggcgcgggcggtggcgggtcc
tcgcccagccctgcgcctgccacgtccccggtgccgccgtccccgtcgcccgtgcccacc
cctgggtcgcccagcggcccggccaccctggacttcaccagccagtttggagcagccctg
gtgggcgcggcgcggagggagggaggctggcagaacgaagcccggcggcggtccacgctg
ttcctgtccaccgatgcgggagatgaggatggaggcgacagcgggctgggcccgggggcg
cccccaggtccccggctgcgccattccaaatccattgatgaaggcatgttctccgccgag
ccgtacctccggctagagtcggggggcagcagcgggggctacggggcctacgcagccggc
agccgagcctacgggggcagcgggagcagcagcgccttcactagcttcctacccccgagg
cccctggtgcatccgctgactggcaaggccttggatcccgcctctccgctggggctggcc
ttggccgcccgggagcgggccttgaaggaatcctcggacggtgggggcaccccccagccg
cctccgagacccccatcgccacgctacgacgccccgccgcccaccctccaccaccactca
ccccactcaccccattcgccacatgcgcgtcacgagccagtgttgcgcctctggggggac
ccggcgcgccgggagctggggtaccgggcaggcctagggagtcaggagaaggctcttccc
gccagtccacctgcagctcgccgctctctactgcaccgtctgcccccgacggctcctggg
gtcgggccgctcctgctgcagctggggccggaacccccaactccccttcctggggtgagc
aaggcctggcgcactgcagcccccgaggagcctgagcggctgcctctgcacgtgcggttc
cttgagaattgccaggcccggcctcccgcagcgggagcgagagggtcttccactgaagat
gggcctggggttccaccgcccagccctcgcagggtcttgccagcctctccaacctccccg
cgggtcagtgaggagaacggccttccgctgctggtcctgccgccgccagccccttcggtg
gatgtggacgacggcgagtttctttttgcggagccgctgcctccacccctggagttttcc
aatagcttcgaaaagccagagtcgcctctcacgcccgggcctccccacccgctgccagac
cctccctccccggctacccctctacctgcagccccacccccggctgtggccgcagcccct
cccaccctggattccaccgcatctagcctgacctcttacgacagcgaagtggccacgctg
acccagggggctcctacggctcctggggatactcctgctccaggcccgccggccccagca
gccccagctcccccagccccgcagccaggccccgatcctccacctggcacggattctgga
atcgaggaggtggacagtcggagcagcagcgatcacccgctggagaccatcagcagcgcg
tccacactcagcagtttgtcggccgaaggaggaggcaacacagggggcgtggctgggggc
ggggccggggtggccagtgggacggagctcctggacacctacgttgcctacctggatggc
caggccttcgggggcagtgggactcctggcccgccataccccccacagctcatgactccc
tccaagctccggggccgggcgcttggggctggtggaaatttgagacctggtcccagtggg
ggactccgagatcctgtcacccccaccagccctactgtctctgtgaccggagctggaaca
gatgggctactggccttgagtgcttgctccggaccctcaacggcaggtgtggcagggggt
cccgtggcggttgagccggaagtcccgccagtacctttgcccactgcctcgtccttgcct
cggaagctgctaccgtgggaggagggtccgggacccccaccaccacccctgccagggccc
ctgtcccagcctcaggcctctgccttggccacggtcaaagccagcatcatcagcgaactc
agctccaagctccagcagtttggtgggtcctctgccgcgggaggagctctgccttgggct
cggggaggcagcgggggcagcacagacagccaccacggaggagccagttacatcccagag
aggacctcctccctgcagcgccagaggctctccgaagactcccagacctctctcctctcc
aaacccagcagcagcatctttcagaactggcctaaaccccctctgcctccactccccacc
ggatctggggtctcctcttcgacggctgcagccccgggagctatctccccttcagcctcc
tccgcctcggcttccacccgacacctgcagggcgtggaatttgagatgcggcctccgttg
ctccgccgggcacccagcccctcgctgctgcctgcctcggatcacaaggtcagcccagcg
cccaggccctcttctttgcccatcctgccttcaggacccctctacccgggcctcttcgac
atccgtagctccccgaccggaggggcaggaggctcggctgacccctttgctccagtcttt
gtgccgccacaccccgggatatctgggggtctcggaggagccttgtcgggggcctctcgc
tccctatcacccacccgcctgctctcgctaccccccgacaagccgttcggcgccaagcct
ctggggttctggaccaagtttgacgtcgccgattggctggagtggctgggcttatcagag
caccgagcccagttcctggaccacgagattgatggctcccacctgcccgccttgaccaag
gaggactatgtggacctgggcgtgaccagggtgggccaccgtatgaacattgaccgggct
ctcaaatttttcctggagaggtga
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