Peromyscus leucopus (white-footed mouse): 114684399
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Entry
114684399 CDS
T07241
Symbol
Prdm1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114684399 (Prdm1)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
114684399 (Prdm1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-C2HE
zf-met
STL11_N
Motif
Other DBs
NCBI-GeneID:
114684399
NCBI-ProteinID:
XP_028714796
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Position
8a:4621600..4643225
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AA seq
815 aa
AA seq
DB search
MWDLLLEKRVGTTLAAPKCSSSSVKFQGLAERTEIMKMDMEDADMTLWTEAEFEEKCTYI
VNDHPWDSGADGGTSLQAEASLPRNLLFKYATTNSKEVIGVVSKEYIPQGTRFGPLIGEI
YTNDTVPKNANRKYFWRIYSREEFHHFIDGFNEEKSNWMRYVNPAHSAREQNLAACQNGM
NIYFYTIKPIPANQELLVWYCRDFAERLHYPYPGELTVMNLTQTESNPKQYSGGKNELYP
KNVPKREYSVKEILKLDSNPSKRKDFYRSDISPLTSEKDMDGFRKNGSPDMPFYPRVVYP
IRAPLPEDYLKASLAYGIERPTYITHSPLPSSTTPSPPASSSPEQSLKSSSPHSSPGNTV
SPPEPRDSYPYLNVSYGSEGLGSYPGYAPAPHLPPAFIPSYNAHYPKFLLPPYGLSSNGL
STMSNINGINNFSLFPRLYPVYSNLLGGSNLPHPMLNPASLPSSLPSDGARRLLPPEHPI
PAPHSAFSLTGAAASMKDESSPPSGSPTAGTAATSEHVVQPKATSAVMAAPSTDGAMNLI
KNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGERPFKCQTCNK
GFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKVCPAKFTQ
FVHLKLHKRLHTRERPHKCAQCHKSYIHLCSLKVHLKGNCPVAPAAGLPLEDLTRINEEI
EKFDISDNADRLEDMEDNIDVTSMVEKEILSVVRKEKEETGLKVSLQRNMGNGLLSSGCS
LYESSDLSLMKLPHSNPLPLVPVKVKQETVEPMDP
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatcttctcttggaaaaacgtgtgggtacgaccttggctgcccctaagtgtagc
tccagctccgtgaagtttcaagggttggcggagaggactgagatcatgaaaatggacatg
gaggacgctgacatgactctatggacagaggctgagtttgaagagaagtgtacctacata
gtgaacgaccacccctgggattccggcgccgacgggggtacttctcttcaagcagaggca
tccttaccaaggaacctgcttttcaagtatgccaccaccaacagcaaagaggtcattggt
gtggtgagtaaggagtacataccacagggaacgaggtttggacccctgataggtgaaatc
tataccaatgacacagttcccaagaacgccaacaggaaatatttttggcggatctattcc
agagaggaattccaccacttcatcgatggctttaatgaggagaaaagtaactggatgcgc
tacgtgaatccagctcactctgcccgggagcaaaacctggctgcctgtcagaacgggatg
aacatctacttctacaccattaaacccatccctgccaaccaggaacttcttgtgtggtat
tgtcgggactttgcagagcgccttcactatccttatcctggagagctcacagtgatgaat
ctcacgcaaacggaaagcaacccaaagcaatacagtggtgggaaaaatgaactgtaccca
aagaatgttcccaagagagagtacagcgtgaaagaaatcctaaaactggactccaatccc
tccaaaaggaaggacttctaccgttccgacatttcacccctcacttcagaaaaggacatg
gatggctttaggaaaaatgggagccccgacatgcccttctacccccgggttgtttaccct
atccgggcacctctgccagaagactatttgaaagcgtccctggcctatgggatagagaga
cccacttacattactcacagcccccttccgtcttccacaactccaagccccccggcaagc
agtagccctgagcagagcctcaagagctccagcccccacagcagcccggggaacaccgtg
tcacccccagaaccccgggactcctacccctacttgaatgtctcctatggctccgagggc
ctgggctcctaccctggctatgcacctgccccccacctcccaccggctttcattccctct
tacaacgctcactaccccaagttcctattgccaccctatggcctaagttccaacggcttg
agcaccatgagcaacatcaatggcatcaacaacttcagcctcttccccaggttgtatcct
gtctatagtaacctccttggtgggagcaacctgccccaccccatgctcaatccagcttct
ctaccgagttccctgccctcagatggagcccggaggttgcttccaccggagcaccccatc
ccagcgccccacagtgccttttcccttaccggggctgccgccagcatgaaggacgagagt
agcccccccagcgggtctccaacggcgggaaccgcagccacatcggaacacgtggtacaa
cccaaagctacctcagcagtgatggcagcccccagcactgacggagccatgaatctcata
aaaaacaaaagaaacatgactggttacaagactcttccctacccgctgaagaaacagaac
ggcaagatcaagtatgagtgtaatgtctgtgccaagacatttggtcagctctccaacttg
aaggtccacttgagagtgcacagtggagaacggcctttcaaatgccagacctgcaacaag
ggttttactcagctcgcccacctgcagaaacactacctggtacacacaggagaaaagcca
catgaatgccaggtctgccacaagcgattcagcagcacaagcaatctcaagacccacctt
cgactgcactctggagaaaaaccttaccagtgtaaggtgtgccccgccaagtttactcag
ttcgtgcacctgaagctgcacaagcgactacatacccgggagcggccccacaagtgtgcc
cagtgccacaagagctacatccatctctgcagcctcaaggtccacctgaagggcaactgt
cctgtggccccagctgccgggctgcctctggaggatctgacccgaatcaatgaagaaatt
gaaaagtttgacattagcgacaatgctgaccgtcttgaggacatggaggacaacattgat
gttacctctatggtggagaaggagattctctctgtggtcagaaaagagaaagaagaaact
ggcctgaaagtgtctttgcaaagaaacatggggaacggacttctctcctcggggtgcagc
ctctatgagtcatcagacctgtctctcatgaagttgcctcacagcaacccactacctctg
gtacctgtaaaggtcaaacaagaaacagttgaaccaatggatccttaa
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