KEGG   Peromyscus leucopus (white-footed mouse): 114685107
Entry
114685107         CDS       T07241                                 
Symbol
Kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pleu03036]
    114685107 (Kdm4b)
Enzymes [BR:pleu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     114685107 (Kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     114685107 (Kdm4b)
Chromosome and associated proteins [BR:pleu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    114685107 (Kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD LBR_tudor SLX1_C DUF7141
Other DBs
NCBI-GeneID: 114685107
NCBI-ProteinID: XP_028715552
LinkDB
Position
22:2696391..2783432
AA seq 1101 aa
MGSEDHSAQNPSCKIMTFRPTMDEFRDFNRYVAYIESQGAHRAGLAKIIPPKEWKPRQTY
DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLER
KYWKNLTFVSPIYGADISGSLYDDDVAQWNIGNLRTILDMVERECGTIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR
HKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKVATQCTCRKDMVKISMDVFVRILQPERYEQWKQGRDLTVLDHTRPTALSSPELSSWSA
SRASLKAKLLRRQISVKENRPWRKAEEERRPSLERRREPTRRPGPASHRRRSQPKKCKPE
DSKSPGEAAAGVAGLDEAGGCSREEATPEDEDEDEELLPSQSHEAGPCMEEDGRGKPRPT
KARSKKKTPSPLSPLLPPAPPTLLPTEEGLRPPPPPKSPVPTMGPMAAEGGLPPAPLNVV
PPGAPGEEAEVRPRPIIPMLYVLPRTNTTDGDRERTAHPQLAPMELGLEDEGQAQAGSAQ
APSSFSKLKVEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEAFLFSGEDDVSDPEALKSL
LSLQWKNKAASFQAERKFNAAAALHEPYCAVCTLFYPYRQSVQTEREIPATPGDSTVQPP
SKSGQRTRPLIPEMCFTSSGENTEPLPANSYVGEDGTSPLISCAHCCLQVHASCYGVRPE
LAKEGWTCSRCAAHAWTAECCLCNLRGGALQTTTEHRWIHVICAIAVPEVRFLNVIERNP
VDVSAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSFHVTCAHAAGVLMEPDDWPY
VVSITCLKHRAGGPGGQLLRTVSLGQVVITKNRNGLYYRCRVIGSTAQTFYEVNFDDGSY
SDNLYPESITSRDCLRLGPPPEGELVELRWTDGNLYRARFISAATSLIYQVEFEDGSQLT
VKRGDIFTLEEELPKRVRSRLSLSTGTPQEPSFSGEDVKAAKRPRVATMLATTTEDTGHS
PEYLAFVESLLQAQGRPGAPF
NT seq 3306 nt   +upstreamnt  +downstreamnt
atggggtccgaggaccacagcgcccagaaccccagctgcaaaattatgaccttccgcccc
accatggacgagttccgggacttcaacagatacgtggcctacatcgagtcgcaaggtgcc
caccgcgcaggcctagccaagatcatcccacccaaggagtggaagccacggcagacgtat
gacgacattgatgacgtggtcatcccagcacctattcagcaggtggtgacaggccagtcg
gggcttttcacacagtataacatccagaagaaggccatgaccgtgggcgagtaccgccgc
ctggccaacagtgagaagtactgtaccccacgccaccaagactttgacgacctggaacga
aagtactggaagaacctgaccttcgtctcgcccatctacggggccgatatcagtggctct
ctgtatgatgatgacgtggcccagtggaatatcggcaacctgaggaccatcctggatatg
gtggagcgtgagtgcggcaccatcatcgagggtgtgaacacaccctacctgtacttcggc
atgtggaagaccacttttgcctggcacactgaagacatggacctgtacagcatcaactac
ctgcacttcggcgagcccaagtcctggtacgccatcccaccggagcacggcaagcgcctg
gagcgcctggccataggcttcttccctgggagctcacagggctgtgatgctttcttgagg
cacaagatgacactcatctcgcccatcatcctgaagaagtatggcatccccttcagccgg
atcacccaggaagctggggagttcatgatcactttcccctatggttaccacgcgggcttc
aaccatggcttcaactgtgcagagtccaccaactttgccacgctgcgctggattgactat
ggcaaagtggccacacagtgcacatgtcgcaaggacatggtcaagatctccatggatgtg
ttcgtacgcatcctgcagcccgaacgctatgagcagtggaagcagggccgtgacctcact
gtgctggaccacactcggcccacagccctgagcagccctgagctgagctcctggagcgcc
tcacgtgcctcactgaaggccaagctcttgcgcagacaaattagtgtgaaggagaacaga
ccctggagaaaggctgaggaggagaggaggccgagtctagagaggaggcgggagccgacc
aggaggccagggccagcgtcgcaccggagacggagccagcccaagaagtgcaagcctgaa
gactccaagtctcctggggaggcggcggctggggtggctggtctggacgaggctgggggc
tgttcccgggaggaggccacaccggaggacgaggatgaggatgaggaactgctgccctcg
cagagccacgaggccgggccatgcatggaagaggatggcagaggcaagccccggccaacc
aaggcccggagcaagaagaagacccccagccccctgtcacccctgttgccgcctgcccca
ccaaccctgttacccactgaggagggcctgaggccaccacccccacctaagtctccggtt
ccaaccatgggccccatggccgcagagggaggtcttccaccagcacccctcaatgtggtg
cctcctggggcaccgggtgaggaagcagaggtgcggccgaggcccatcatccccatgctg
tatgtgcttccccgcaccaacaccactgatggggaccgggagcgcactgcccacccacag
ctggcacccatggagctgggactggaagacgaaggccaggcccaagccggcagtgcgcag
gccccgtcctccttctccaagctgaaggtggaaatcaaaaagagccgtcgtcaccccctg
ggtcggccacccacacggtccccactgtctgtggtcaagcaggaggcttccagtgatgaa
gaagccttcctgttctcaggagaggacgatgtgagtgaccccgaagccttgaagtccctg
ctgtcgctgcagtggaagaacaaggcggccagtttccaagctgagaggaagttcaatgcg
gcagctgccctccatgagccctactgcgccgtctgtacgctcttctacccctacagacag
tcagtacagacagagcgggagatcccggccactccaggggacagcactgtccagccaccc
tcgaaaagtggccagaggacacgaccactgatccctgagatgtgcttcacttcgagtggg
gagaacacggagccactgcctgccaattcctatgtcggcgaggatggcaccagccctctc
atttcctgtgcccactgctgcctgcaggtccacgccagttgctacggtgtccggcctgag
ctggccaaggagggctggacatgctcccggtgtgcggcccatgcctggactgcggaatgc
tgtctgtgcaacctccgcgggggagcgctgcagacgaccacggagcacaggtggattcac
gtgatctgcgccattgcagtccccgaggtacggttcctgaacgtgattgagcgcaaccct
gtggacgtcagtgccatccctgagcagcggtggaaactgaagtgtgtgtactgccgcaag
cgcatgaagaaggtgtccggcgcctgcatccagtgctcctacgagcactgctccacatcc
ttccacgtgacctgcgcacatgcagctggtgtcctcatggagcccgacgactggccctac
gtagtgtccatcacctgcctcaagcacagagcaggtggccctgggggtcagctcctgcgc
actgtgtccctgggccaggtcgtcatcaccaagaacaggaacgggctctactaccgctgt
cgcgtcattggcagtaccgcgcagaccttctacgaggtcaacttcgatgacggctcctac
agcgacaacctgtatccagagagcatcactagcagagactgcttgcggctggggccgcct
cctgagggcgagctggtggagctgcggtggacagacggcaacctgtatagagccaggttc
atctccgcggccaccagcctcatctaccaggtggagtttgaggacgggtctcagctgacg
gtgaagcgtggggacatcttcaccctagaagaggagctgcccaagagagtgcggtcccgg
ctgtctctgagcacgggcacaccacaggagcccagcttctctggagaggatgtgaaggct
gctaagcgcccacgggtggccaccatgctggccaccaccacagaggacacagggcacagc
ccagaatacctggccttcgtggagagcctgctgcaggcacagggtcgacctggggcaccc
ttctag

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