Peromyscus leucopus (white-footed mouse): 114685343
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Entry
114685343 CDS
T07241
Symbol
Cic
Name
(RefSeq) protein capicua homolog isoform X3
KO
K20225
capicua transcriptional repressor
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
114685343 (Cic)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114685343 (Cic)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114685343 (Cic)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
114685343
NCBI-ProteinID:
XP_028715790
LinkDB
All DBs
Position
1:complement(170087337..170114198)
Genome browser
AA seq
2513 aa
AA seq
DB search
MKPMKKVCPSLVGSASGSKSPPATRAKALRRREAGEGDKPEEEDEEAQPQEQTGPEEAEE
GEEEEAERDPGAEGPPPELQPNDPTPGLAEDPKGDGEAGRWEPSLSRKTATFKSRAPKKK
YVEEHGAGSGGMAGAPEERERTPEDASALGVPPRPPTSTRSSSTDTASEHSADLEDEPAE
ACGPGPWPSGGPSGAYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPGDRALT
FYEGVSGGGVDVVLDATPPPGALMVGTAVCTCVEPGVAAYREGVVVEVATKPAAYKVRLS
PGPSSHPGPPGTLPQAQQPLHREPEEAVWVTRSSLRLLRPPWEPEALLRKLPAGPEEEQA
EPGVTLPPCPSSLESKQPEDAEVSNISFGSNLGTHCAEGEEKHPPALGTPVLLPLPPPQL
LSPPPKSPAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGAAPSARARTPLTAAQQKY
KKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADSGPG
GTGRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECEAAV
MLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAVRSR
HLSASTPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTELLPH
PGTLGASGAGGGGAAPDFPKSDSLDSGVDSVSHTPAPSTPAGFRAVSPAVPFSRSRQPSP
LLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVGTAGEARAGGPGR
GCRETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTLGLASSPFQPVAFHPS
PAALLPVLVPSSYPSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDPS
VQPSEAQQPASHPVASNQSKEPAESAAVAHEQSPGGAGSADPGRPPGATCPESPGPGPPL
TLGGVDPGKSLPPATEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQ
SLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSK
ILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGH
KETRERSMSETGTAAAPGVSSELLSVAAQTLLTSDTKPPGSGPCGTERLHTVGGPGSARP
RAFSHSGVHSLDAGEVDSQALQELTQMVSGPTSYSGPKPSPQYGAPGSFAAPGEGGTLAT
SGRPPLLPSRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDSFGTTDIDLKCKERVT
DSESGDSSGEDPEGNKGFGRKVFSPVIRSSFTHCRPTLDPEPPGPPDPPAAFSKGYGPTP
SSSSSPASTSVSTSFSLGSGTFKTQESGQGGTAVPLRPPPPGVGGPTTPSKTTRFLPTDP
GTFRRKRPESVGSLEAPGPSVIAAPPSVGGNILQTLVLPPSKEEREGSGTRVPSTPAPSL
AYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASSNDTGARTEMGTGSR
VPGGSPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYGAPASS
AVQFIAQGAPGSVTPAGSGASAGSGPNGPVPLGILQPGALGKAGGITQVQYILPTLPQQL
QVAPAPAPPPGTKAAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTAGIPILQSVPSAP
PPKAQSVSPVQATPSGGSAQLLPGKVLVPLAAPSMPVRGAGAGQPLPLVSSPFSVPVQNG
AQQPSKIIQLTPVPVSTPSGLVPPLSPATMPGPTSQPQKVLLPSSTRITYVQSAGGHTLP
LGTSPACSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAGQAPLLAPGQVGVSPVP
SPQLPPACTAPGGPVITAFYPGSPAPTSAPLGPPSQAPPSLVYTVATSTPPPAAAILPKG
PAASATATPAPTSPFSSTTGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFESGATG
RPGPTSRQSLDSGAAREPAAPESELDGQPTPPVPPPPPETWPPAARSSPPLPLPAEERPG
TKGPETASKFPSSSSDWRVPGLGLESRGEPPTPPSPAPAPATVPSGSSSGSSEGSSGRAA
GETPERKEVTSSGKKMKVRPPPLKKTFDSVDSRVLSEVDFEERFAELPEFRPEEVLPSPT
LQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGD
IFTFDRTGTETEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQA
RYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLSGPPPTGMAATPVPTPSPAG
CPDPTSPGSDSGTAQAAPPLPPPPEPGPGQPGWEGASQPSPPPSGPSTAATGR
NT seq
7542 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaaggtgtgccctagccttgtaggttctgccagcggcagcaagtcc
ccaccagctaccagggccaaggctttgagacggcgagaggccggggagggtgacaagcca
gaggaggaggatgaggaagcacagccacaggagcagacagggccagaagaggctgaagaa
ggtgaggaagaggaggctgagcgggaccctggagctgaggggccacctccagagctgcag
cccaatgacccgactccaggcctagctgaggaccccaagggggatggggaggcaggccgc
tgggagccttcactcagtcgcaagacagccacgttcaagtcccgggccccaaagaagaag
tatgtagaagagcatggtgccggaagcggtggcatggccggagcccctgaggagcgtgag
cggacccctgaggatgccagtgccctgggtgtacctccacggccccccacttccacccgg
tcctcatctaccgacacagccagtgagcactcagctgacctggaggatgagcccgctgag
gcttgtggtccaggcccctggccctctggtggccccagtggtgcctatgaccttcggcaa
ctaaggtctcagcgggtgctggctcggcgtggtgatggcctcttcctgcctgctgttgtg
cgccaggtgcgccgtagccaggacctgggtgttcagttccctggggaccgggccttgact
ttctatgaaggggtctccggtggtggtgtggatgtagttttggatgccacgccacctcca
ggtgctctgatggtgggcacagctgtctgtacctgtgtagagcctggtgtggctgcctac
cgagagggtgtagtggtggaagtggccacgaaaccggctgcctataaggtccgcctcagc
cctggccccagctcccacccaggcccaccaggcactctgccccaagcccaacagccactg
caccgtgagcccgaggaggctgtgtgggtcacccgctctagcctgcgcctgcttcgcccg
ccctgggaacctgaggccttgctgaggaagctccctgcaggcccagaggaagagcaggct
gagcctggggtcactttgcctccttgcccttcttccttggagtccaagcagcctgaggat
gctgaggtctccaatatcagctttggtagcaacctggggactcattgtgcagagggggag
gagaaacaccctccagccctgggcaccccagtcctgctcccactgcctccaccccagctc
ctgtcgccgcccccgaagtccccagcctttgctggccctggtcgccctggtgagcagcct
tcgccctgccaggaaggaagccagggtggcagccggagcagcagcgtggcctcactggag
aagggagctgcaccatcagcccgtgctcgcacgcccttgacagctgctcagcagaagtac
aagaagggcgacgtggtctgcacgcccaacggtatccgaaagaagttcaatgggaagcag
tggcggcggctctgctcccgggatggctgtatgaaggagtcccagcggcggggctactgc
tcacgccacctttccatgagaaccaaagagatggagggcctggcagacagtgggccaggt
ggaactgggcggcctgctggtgtggcagcccgtgaaggaagcactgagtttgactggggt
gatgagacttcgagggacagtgaggccagcagtgtggcagcccggggagactctcgccca
cgcctggtagcgcctgccgacctgtcacgctttgagtttgacgagtgtgaggcggccgtg
atgctggtgtcattgggcagctcccggtcaggcacaccttccttctcaccggtctctaca
cagtcgcccttctcgccagctccgtcaccctcaccctcacccctcttcggctttcgccct
gccaacttcagccccataaatgcctcacctgtcatccaacgcactgctgttcgtagccgc
cacctgagcgccagcacccctaaggcaggtgtgctgacacctccagacctgggcccccat
ccgccgccacctgccccccgagagcgccattcctccggcatcctacccaccttccagacc
aacctaacctttactgtgcccattagccctgggcgaaggaagacggaactgttaccccac
ccagggacattgggggcctctggggcaggaggtggaggagcggccccagacttccccaag
agtgacagcctggactctggagtggactcggtgtcccatacacctgccccctccacaccg
gctggcttccgggctgtatcgcctgctgtgcccttctctcgctcccgacagccgtcacca
ttgctgctgctgcccccacctgctggacttacctcggacccagggccttctgtgcgaagg
gtgcctgccgtgcagcgggactcacccgtcattgtccgcaaccctgatgtgccactgccc
tccaaattccctggagaggtgggcactgccggtgaggcacgggccgggggacctgggcgg
ggttgccgtgagaccccagtgccccctggggtggccagcgggaaacctggcctgcctcca
cctctgcctgcccccgtgcccatcactgtgcctccagccgcgccgactgctgtggcccag
ccgatgcccaccttgggcctggcgtcttcacccttccagcccgtggcctttcacccttca
cctgctgccctgttgccagttctagtgcccagcagctatcccagccaccctgcccccaag
aaggaggtcatcatgggcaggcccggaacagtgtggacaaatgtggaacctcgttctgtg
gctgtgttcccctggcactctttggtcccctttctggcacccagccagccagacccctct
gtccagcctagtgaggcccagcaacctgccagccaccctgtggcctccaaccagagcaaa
gaacctgctgaatcagctgctgttgctcatgagcagtcaccaggaggggcagggagtgct
gaccctgggcggccccctggagccacatgccctgagagcccagggcctggacctccactc
actttggggggtgtggatcctggtaaaagtcttccccccgctactgaggaggaggcccct
ggccccccaggagagcctcggctggatagcgagacagagagtgaccatgatgatgccttc
ctctccatcatgtctcctgagattcagctgcctctgccacccggaaagcgccggacccag
tccctgagtgccctgcccaaggaacgagactcatcttctgagaaggatggacgaagtcct
aacaagcgggagaaggatcacatccgtcggcccatgaatgcctttatgatcttcagcaag
cggcaccgggccttggtccaccagcggcaccccaaccaggataaccggaccgtcagcaag
atcctgggagagtggtggtatgccctggggcccaaggagaagcagaaataccacgatctg
gccttccaggtgaaagaggcccacttcaaggcccacccagattggaagtggtgcaacaag
gaccgaaagaagtccagctcagaggccaagcccacgagcctggggctggcaggagggcac
aaggagacgcgggaacggagcatgtcggagacgggaactgctgctgcccctggggtgtct
tctgagctcctgtccgttgcagcccagacactcctgacctcggacaccaagcctccaggg
agtggcccctgtggaacagaacggctgcacacggttgggggacctggttcggcccgacct
agagccttctcccacagcggcgtgcacagtcttgacgctggggaagtcgacagccaggca
ctacaagaactgacccagatggtgtctggccccacgtcgtactccggcccaaagccttcc
ccccagtatggcgctccaggatcttttgcagctcctggtgaaggaggtaccttggccact
agtgggcggcccccactgttgccctctcgagcctctcgttcccagcgtgctgccagtgag
gacatgaccagtgatgaggaacgtatggtcatctgtgaggaagaaggggatgatgatgtc
attgctgatgacagtttcggcaccactgacattgacctcaagtgtaaggaacgggtgact
gacagtgagagtggagacagctctggggaggacccagagggcaacaagggctttggccgt
aaggtgttctcacctgtcatccgctcctcttttacccattgccgtccaaccctggaccct
gagcctccagggcccccggatccacctgcagccttcagcaaaggctatggtcccacccca
tcttcctcctcctcacctgcttccacttcagtctccacctccttttcactgggctctggg
acctttaagacccaggagtctggtcagggcggcacagcagtcccactacggcccccacct
cctggagttgggggtccaacaacaccttccaaaaccactcggtttcttccgacggatcct
ggcaccttccggcgcaagagacccgaaagtgttggtagcctggaggcaccaggcccctca
gtcattgcagcacctcccagtgtgggaggaaacattctgcagacactggttctgcctcca
agcaaggaggaacgggagggcagtggtacacgagtgccctcaaccccggccccatcactg
gcctatggggccccagcagcccctctgtcccgccctgctgccaccatggtcaccaatgtg
gtccggcctgtcagcagcactcctgtgcccattgcctctaagccctttcccacctctggc
cgggctgaggcgtcttcaaatgacacaggtgccaggactgaaatgggcactgggtctcgg
gtgcctggggggtccccattgggtgtcagtttagtgtattcagataagaagtcagcagcc
gccacctcaccggccccacacttggtagctggtcccctgctgggcactgtggggaaggca
cctgctactgtcaccaacctgctggtgggtaccccaggctatggggctcctgcatcgtct
gctgttcagtttattgcccagggagccccaggcagtgtgacccctgcaggctcaggagca
agtgctgggagtggccccaatgggccagtacccctgggcatcctgcagccgggtgcccta
ggcaaggctgggggaatcacccaggtgcagtacatcctgcccacactgccccagcagctt
caagtggcacccgccccagcaccaccccctgggaccaaggcagcagctcccagtggccct
gcacccaccaccagcatccgtttcactctccctccgggcacctcgaccaacggaaaggtc
ttggctgccactgcgcccactgctggcatccctatcctgcagtctgtaccttccgcccca
ccccctaaagcccagtcagtttctcctgtccaggccacgccctcaggtggctcagcccag
ctgcttcctgggaaggtgctagtcccactggctgccccgagcatgccagttcgaggggca
ggggctggccagccactgcccctggtcagctcacctttctcagtacctgtccaaaatggt
gcccagcaacccagcaagattatccagctgactcctgtgcctgtgagcacacctagcggt
ctggtgccacccctgagcccagccacaatgccaggacccacatcacagcctcagaaggtc
ctgttgccctcttccacaagaatcacttatgtgcagtcagcaggtggccacactctgcct
ctgggtaccagtcctgcatgcagtcaggctggaacagtgacctcatacgggcccaccagc
tctgtagctctgggcttcacatcgttggggcccagtggtcctgcctttgtacagcccctg
ctctcagcaggccaagctccattgctggctcctggccaggtgggcgtgtcgcctgtgcct
agcccccagttgcctcctgcctgcacagcccctggaggccctgtcataacggcgttttac
cctggcagccctgcacccacctcagcacccctgggcccaccttcccaagctcctccaagc
ctggtctacactgtggccaccagcacccccccacctgctgctgccattctgcccaagggc
ccggcagcctctgccactgccactccagcccccactagtcctttctcgagtaccacaggc
tccatgacctacagcttagtggctcccaaggcccagcggcccagtccaaaggccccccag
aaggtgaaggcagccatcgccagcattcccgtggggtcttttgaatcgggtgccactggg
cggcctggacctacatcccgacagtctctggactctggcgcagcccgagagccagctgct
ccagaatccgagcttgatgggcagcccacacccccagtccccccacctcccccagagacg
tggcctcctgctgctcggagcagcccacccctacccctgcctgctgaggagcgacctggc
accaaaggccctgagactgccagcaaattccccagctcatcttcagactggcgagtccct
gggctgggcctggagagtcgtggggagcctcccactccccccagcccagctcctgctcca
gccacagtccctagtggaagcagcagtggcagcagtgagggcagtagtgggagggcagct
ggggaaacacctgagcgcaaagaagtgactagttctggcaagaagatgaaggtgcggccc
ccacccctgaagaagacctttgactctgtggacagcagggtcctgtcagaagtggacttt
gaagaacggtttgctgagctacccgagtttcggccagaggaggtgctgccttcacccacc
ctgcagtctctggccacctcgcctcgggccatccttggctcctaccgcaagaagaggaag
aattccactgacttggactcggcgcctgaggaccccacctcacccaagcgcaagatgagg
agacggtcgagctgcagctcagagcccaacacccccaagagtgccaagtgcgagggtgac
atcttcaccttcgaccgcacaggtactgaaactgaggatgtgctaggagagctggagtat
gagaaagtaccctactcatcactgcggcgcaccctggaccaacgccgggccctggtcatg
cagctcttccaggatcatggcttcttcccatcagcccaggccacagcagccttccaagcc
cgctatgcagacattttcccatccaaggtgtgtctgcaattgaagatccgagaggtccgc
cagaagatcatgcaggcggccactcccacagagcagccccctggggctgaggcccctctc
tctggaccaccccctactggcatggctgctactcctgtccctactcccagccctgctggg
tgccctgaccccacctctccaggctcggactctggcactgcccaagctgccccgccactg
cctccacccccagagcctgggcctggacagcctggctgggagggggcttcccaaccctcc
ccacctccctctggcccctctacagctgccacaggcaggtga
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integrated database retrieval system
