Peromyscus leucopus (white-footed mouse): 114685480
Help
Entry
114685480 CDS
T07241
Symbol
Vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X2
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04140
Autophagy - animal
pleu04148
Efferocytosis
pleu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114685480 (Vps41)
04148 Efferocytosis
114685480 (Vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114685480 (Vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114685480 (Vps41)
Membrane trafficking [BR:
pleu04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
114685480 (Vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_EML_2
zf_RING_Vps8_fungal
Vps39_1
Beta-prop_HPS5
zf_RING_Vps8
Beta-prop_RIG_2nd
TPR_PEP5_VPS11
zf-RING_5
Frtz
RIG-I_C
Beta-prop_IFT140_2nd
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
114685480
NCBI-ProteinID:
XP_028715959
LinkDB
All DBs
Position
5:complement(43477887..43635048)
Genome browser
AA seq
853 aa
AA seq
DB search
MAEAEEQETGSLEESTDESEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALG
THYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFHE
TFDCPIKIIAVHPQFVRSSCKQFVTGGKKLLLFERTWMNRWKSSVLHEGEGNIRSVKWKG
HLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDTLTLIIGWGASIKIC
SVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCAR
PRLDIIQPLPETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKERD
QDDHIDWLLEKKKYEEALMAAEISQRNIKRHKILDIGLAYVNHLVERGEYDMAARKCQKI
LGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLIR
EWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVFQ
LIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHKL
FKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLS
RMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHV
DPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRSQMK
GVLVDEENICESCLSPILPTDAAKPFSVVVFHCRHMFHKECLPMSSMNAPAQYCNICSAK
NRGPGSAILEMKK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcagaggagcaggaaactgggtctcttgaagagtctacagatgaatcagag
gaagagagtgaagaggaacccaaattgaagtatgaaagactttccaatggggtcacagag
attcttcagaaggatgcagcaagctgtatgacggtccatgacaagtttttggcactgggt
acacattatggcaaggtttatttacttgatgtccagggaaacatcactcagaagtttgat
gtaagtcctgtgaagataaaccagattagcctggatgaaagtggagaacacatgggtgtg
tgttcggaggacggcaaggtacaagtatttggactctattctggagaagaatttcatgag
actttcgactgtcccattaaaatcattgctgtgcacccacagttcgtgagatccagttgt
aagcagtttgtgacaggagggaaaaagttgctgctgtttgaacggacatggatgaacaga
tggaagtcttcagtcctgcacgaaggggaagggaacataaggagtgtgaaatggaaaggc
catctgattgcttgggccaataacatgggtgtgaagatttttgacatcacctcaaagcaa
agaatcaccaatgttccccgagatgatataagtcttcgcccagatatgtatccctgcagc
ctctgctggaaagacactctgacactcattattggttggggagcttccatcaagatatgt
tcagtgaaggaacgtcatgccagtgagatgagggatctgccaagtcgatatgttgaaata
gtgtctcagtttgaaacggaattctacattagtggacttgcacctctctgtgatcagctt
gttgtactttcctacgtaaaggaggtttcagaaaaaacggaaagagaatactgtgccagg
cctagactggacatcatccagccacttcctgagacttgcgaagagatctcatctgatgct
ctgacagtcaggggctttcaggagaacgaatgtagggattatcatttagaatactctgaa
ggggaatcacttttctacatcgtgagtccaagagacgttgttgtagccaaggaacgagac
caggatgaccatatcgactggctccttgaaaagaagaaatatgaagaagctttgatggca
gctgagattagccaaaggaacattaaaagacataagattctggatattgggttggcatat
gtcaaccacctggtggaaagaggagaatacgacatggctgcacgaaaatgccagaaaatt
cttggaaaaaatgcagctctctgggaatatgaagtttacaaatttaaagaaattggacag
cttaaagcaattagtccttatttaccaaggggggacccagtcctgaaaccactcatctat
gaaatgatcttacacgaatttttggaaagtgattatgagggctttgccacgttgatcaga
gagtggcctggagatctgtataacaattctgtgatagttcaagcagttcgagaccacctg
aagaaggacagtcagaacaagactttattaaaaacactggcagaattgtacacctatgac
aaaaattatggcaatgctctggaaatatacttaacgttaagacataaagatgttttccaa
ctgatacacaagcataatcttttcagctccatcaaggataaaatagttttattaatggat
tttgattcagagaaagctgttgacatgcttttggacaacgaagataaaatttcaattaaa
aaagtggtagaagaattagaagacagaccagaattgcagcatgtgtatttgcataagctc
ttcaaaagagaccatcataagggacagcgctaccatgaaaaacagatcagtctgtatgct
gaatacgatcggccaaacctccttccctttctccgagacagtacccattgcccacttgaa
aaggctcttgagatctgtcaacaaagaaactttgtagaagagacagtttaccttctgagc
cgaatgggaaacagtcggagtgccctcaagatgattatggaggaattacatgatgttgat
aaagcaattgagtttgccaaggagcaagatgatggagagctctgggaagacctgattcta
tattccatcgacaaaccaccatttattactggcttgctaaacaacatcggcacacacgtg
gacccaatcctactaattcaccgtatcaaggaaggaatggagattcccaatttgagagat
tccttggttaaaattctgcaagattataacttgcagattctgcttcgggaaggctgcaag
aaaatcctcgtagctgactctttgtcattactgaagaagatgcaccgatcccaaatgaaa
ggtgttctcgtcgatgaagagaatatctgtgaatcgtgcctctctcccatcctcccaaca
gatgcagctaagcccttcagtgtggtggtcttccattgtcgacacatgttccacaaggag
tgcctacccatgtcaagcatgaacgctcctgcacaatactgtaacatctgcagtgctaag
aaccgtggacctggaagtgccatcctggagatgaagaagtag
DBGET
integrated database retrieval system
