Peromyscus leucopus (white-footed mouse): 114686165
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Entry
114686165 CDS
T07241
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-6-like
KO
K16494
protocadherin beta
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pleu04515
]
114686165
Cell adhesion molecules [BR:
pleu04515
]
Cadherins
Protocadherins
114686165
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
114686165
NCBI-ProteinID:
XP_028716647
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Position
19:26715589..26720390
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AA seq
796 aa
AA seq
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MPQTKEPGKARQMIILLTLMLSWEVGSESIQYAMLEETESGTFVANLTKDLGLRAGELAA
RGARVVFKGNRQYLQLDPQTQDLVLNEKLDREELCGSTEPCMLPFQVLLKNPLQFYQAAL
RVIDINDHAPEFPAREVLLKISEITAPGKIFPLKMAQDLDTGGHSIQSYTVSDNGHFHVL
TRSRSDGKKFPELVLDKALDREEQAQLRLTLTAVDGGSPPRSGTTEIQILVLDINDNTPE
FAQELYEVQVPENNPIGTLLITLSARDFDTGPFGEVSYALLQDDDVNEPFVINTKTGEIR
LRSTLDFEAFQSYHVGVEAIDGGGLTGKCSLVVQVLDVNDNAPEVILSSLNSPITENLPS
IVVAVFSVSDADSENNQEVTCSIDDNLPFLLRPSVENFYTLETDGALDRESRAEYNITIT
VTDMGTPRLXNQHTITVQVSDVNDNAPAFTQTTYTLFVQENNSPALHIGTISATDSDSGS
NAHITYSLLPTYDPQLALDSLISINTDNGHLFALRALDYEALETFEFHVGATDQGSPALS
SQALVHVLVLDANDNAPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNAWL
SFQLLKATEPGLFSVWAHNGEVRTSRLLSERDAPKHRLLLLVKDNGDPPRSASVTLHVLL
VDGFSQPYLPLPEVARDPAHDNEDLLTLYLVIALASVSSIFLLSVLLFVGVRLCRRARAA
SLGGCSVPEGHFPGHLVDVSGAGTLSQSYQYEVCLREDSGSGEFKFLKAINPHFPPLESE
RKTEETPTLRNSFLFI
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaacaaaggagccgggcaaggcaaggcaaatgataattttacttacactgatg
ctttcgtgggaggtgggctcagaatcaattcagtatgccatgctggaggagacagaaagt
ggcacctttgtggccaatctgactaaggacttgggactaagggcgggagaattggctgcg
cggggcgctagagtggttttcaaggggaacagacagtatttgcaacttgacccacagacc
caggacttggtgctaaatgaaaagctggaccgggaagagctgtgcggctccacggagcct
tgtatgctgcctttccaggtgttactaaaaaatcctttgcagttttatcaggctgcactg
agagttatagatataaatgaccacgccccagagtttcctgccagagaggtgctccttaaa
atatcagaaataactgcaccgggaaagatattccctttgaaaatggcgcaggacttagac
actggcggccacagcattcagagctacactgtcagcgacaacggtcacttccatgtactc
actcgcagccgcagcgatggcaagaagttccccgagctagtgctggacaaggcattggac
cgtgaggagcaggctcagctcagactaacacttactgcagtggatggcgggtctccgccc
aggtcagggaccactgagattcaaatacttgtcttagatataaatgacaacactccggaa
tttgctcaggagctctatgaggtccaagtcccagagaacaaccccataggcacactgctt
attaccctctcagcaagagatttcgatacaggaccctttggagaggtttcttacgcactg
ttgcaagatgatgatgttaacgagccttttgtaataaacacaaagacaggggagattcga
ctgagaagcacgttggattttgaagcatttcagtcctatcatgtgggtgttgaggccata
gatggtggtgggctaacaggaaagtgctctttagttgtgcaagtattggatgtgaatgac
aatgctccagaagtgatcctatcctcactcaacagccccatcactgaaaatttgccaagc
atcgtagtggcagtattcagcgtttcagatgcagactcagaaaataaccaggaggttacg
tgttccatagatgacaatcttccatttctcctaagaccatccgtggagaatttctatact
ttggaaacagatggggcactagatagagagagcagagctgagtacaacatcaccatcaca
gtcaccgacatgggcacacccaggctcnacaaccagcacaccataacagtgcaggtctct
gatgtcaacgacaatgcccctgccttcacacaaaccacctacaccctgtttgtccaggag
aacaacagccccgccctgcacataggcaccatcagcgccacagactcagactcaggctcc
aatgcccacatcacctactcgctcctgcccacctatgaccctcagctagcccttgactcg
ctcatctccatcaacaccgacaatgggcatctgttcgcgctcagggcgctggactatgag
gccctggagactttcgagttccacgtgggcgccacagaccaaggctcccctgcgctcagc
agccaggcgctggtgcatgtgctggtgctggacgccaacgacaatgcgcccttcgtgctc
tacccgctgcagaacgcctctgcaccctgcacagagctgctgcccagggcggcagagcca
ggctacctggtcaccaaggtggtggcagtggaccgcgactctggacagaatgcctggctg
tccttccagctgctcaaggccacagagcccgggttgttcagtgtgtgggctcacaatggc
gaggtgcgcacctccaggctgctgagtgagcgcgatgctcccaagcacaggttgctgctg
ctggtcaaggacaatggagatcctccaaggtctgccagtgtcactctgcatgtgctgcta
gtggatggcttctctcagccctacctgcctctgccagaggtggcgcgggaccctgcgcac
gacaatgaagatttgctcactctgtacctggtcatcgccttggcttctgtgtcttccatc
ttcctgttgtctgtgctgctgttcgttggggtgaggctgtgcaggagggccagggcggcc
tctctgggtggctgctctgtgcctgagggacactttcctggtcacctggtggatgtcagc
ggggcagggaccttgtcccagagctaccagtatgaggtgtgtctgagggaagactctggg
agtggtgagttcaaatttctaaaggcaattaacccccacttccctcctttggaatctgag
aggaaaacagaggaaactcctactcttcggaatagcttcctattcatctaa
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