Peromyscus leucopus (white-footed mouse): 114686168
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Entry
114686168 CDS
T07241
Name
(RefSeq) protocadherin alpha-6-like
KO
K16493
protocadherin alpha
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
114686168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pleu03036
]
114686168
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pleu04515
]
114686168
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
114686168
Cell adhesion molecules [BR:
pleu04515
]
Cadherins
Protocadherins
114686168
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_CLSTN
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
114686168
NCBI-ProteinID:
XP_028716649
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All DBs
Position
19:26277645..26280476
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AA seq
814 aa
AA seq
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MEIKQEAFDMDFTTEGRLGTRCLLLSLLLLAAWEAGSGQLHYSVPEEAKHGTFVGRIAQD
LGLELAELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREALCGRSAECSIHLEVIVD
RPLQVFHVEVEVRDINDNPPVFSVKEQRMLIYESRLPDSLFPLEGASDADVGSNSLLTYK
LSPSEYFGLDVKTNSDGNKQIGLLLKKSLDREDAPEHKLLLTATDGGKPELTGSVQLLVT
VLDVNDNAPTFQQSEYEVRILENSDNGTTVVRLNASDRDEGTNSEISYSFNRLVPPMVLE
KFSIDTDTGEIVIQGNLDFEQVNVYKMRVDATDKGHPPMAGHCTVLVKVLDENDNVPEIT
LTSLSLPVREDAALGTVIALVSVSDLDSGVNGQVTCSLTPQVPFKLVSTFKNYYSLVLDS
ALDRETIANYHVVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPG
AHIFTVSAMDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELL
QFQVSARDAGVPALGSNVTLQVFVLDENDNAPALLGPWTQGSGGVVSELVSPSVGAGQVV
TKVRAVDADSGYNAWLSYELHPLTGGTRSLFRVGLYTGEISTTRALEEADAPRHRLLVLV
KDHGEPALTATATVLVSLVENSQTPKASSRASGATGQEVSLVNVNVYLIIAICAVSSLLV
LTLMIYTALRCSVPPTEGMCGSGKPVLVCSSAVGSWSYSQQRRQKVCSGEGPPKTDLMAF
SPSLPPCPVVGEHQDLNEDHSSRVSPKFVIVITV
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaagcaagaagcatttgacatggattttaccactgaaggcagactgggaaca
cggtgtctgctgctctcactcctgctcctcgctgcctgggaggcagggagcggccagctc
cactactccgtccccgaggaggccaaacacggcaccttcgtgggccgcatcgctcaggac
ctgggactggagctggcggagctggtgccccgcctgttcagggtggcgtccaaggaccgc
ggggaccttctggaggtaaatctgcagaatggcattttgtttgtgaattctcggatcgac
cgggaggcgctgtgcgggcggagcgcggagtgcagcatccatttggaggtgatcgtggac
cggccgctacaggttttccatgtggaggtggaggtgagggacattaatgacaacccgcct
gtgttctcggtaaaggagcaaagaatgttaatttacgaatctagactgccggattctttg
tttccactagagggcgcatcagacgctgatgttggatcaaactctctcttaacctataaa
ctcagtcccagcgaatattttgggctagatgtgaaaacaaacagtgatggcaacaaacaa
atcggactcttgttgaaaaaatccttggacagagaggatgctcctgagcataagctactg
ctgacagccacggatggaggcaaacctgagctcacaggctctgttcagctgctggtcact
gtgctggatgtgaacgacaacgcccctactttccagcagtctgagtatgaagtgagaata
ttggaaaactcagacaacggaacgacggttgttagactgaatgcttcggacagggacgaa
gggacgaattcagaaatttcttattcctttaataggttggtcccacccatggttcttgag
aagtttagcatagatacagatacaggagaaattgtaattcaagggaacttggattttgag
caagtcaatgtctacaaaatgcgcgtagacgcgacagacaaaggacatcctccgatggcg
ggtcattgcactgttctggtgaaggtgctggatgaaaatgacaatgtgcctgagatcaca
ttgacttccttatcgctgcctgttcgagaggacgctgcactgggtactgtcattgctctg
gttagcgtttcggacctggactcaggtgtcaacgggcaggtgacctgttccttgactcct
caagtccccttcaagctggtgtccactttcaagaattactattcgctcgtgctggatagt
gccctggaccgagagaccatcgctaactaccacgtggttgtgaccgctcgagacggcggc
tcgccctcgctgtgggccacagccagcgtgtccgtggaggtggctgacgtgaacgataac
gcgcccgcgttcgcgcagcccgaatacacggtgttcgtgaaggagaacaacccgcctggc
gcgcacatcttcacggtgtcggccatggacgcggacgcccaggagaacgcgctggtgtcc
tactcgctggtggagaggagggtgggcgagcgcttgctgtccagctatgtgtctgtgcac
gcggagagcggcaaggtgttcgcgctgcagcctctggaccatgaggagctggagctgctg
cagttccaggtgagcgcgcgggatgctggtgtgcctgccctgggcagcaatgtgactctg
caggtgtttgtgctggatgagaatgacaatgcgcccgcgctgctaggaccttggacgcaa
ggatccggtggtgtagtgagcgagcttgtgtccccttcagtgggtgcgggccaagttgtc
actaaggtgcgcgcggtagatgcggattctggctacaatgcgtggctgtcttatgaactg
catcctttaacgggtggaacgcggagtctgttccgggttggtctgtacacaggcgagatt
agtactacacgtgccctggaggaggcagatgcaccgcgccaccgcctattagtgctggtg
aaggaccacggggaaccggcgctgacagccactgccaccgtgttagtgtctctggttgag
aatagccaaactccaaaagcttcttcgcgggcgtcaggcgccacgggccaggaagtttca
ttagtgaatgtcaatgtgtacctgatcattgccatctgtgcggtgtccagcctgctagtt
ctaacactcatgatatacactgcacttcggtgctcagtgccacccacagaaggcatgtgc
ggatctgggaagcctgtgctggtgtgctccagtgccgtggggagctggtcatattcacag
cagaggagacagaaagtgtgttctggagagggaccacccaaaaccgacctcatggccttc
agcccgagtcttcctccttgtccggttgtgggcgagcatcaggatttaaacgaagatcat
tcttcaagagtaagtccaaaatttgtaattgtcattacggtttaa
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