Peromyscus leucopus (white-footed mouse): 114686174
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Entry
114686174 CDS
T07241
Name
(RefSeq) protocadherin beta-4-like isoform X1
KO
K16494
protocadherin beta
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
114686174
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pleu04515
]
114686174
Cell adhesion molecules [BR:
pleu04515
]
Cadherins
Protocadherins
114686174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Ig_CLSTN
Cadherin_FAT4_N
Ig_Cad99C_N
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
114686174
NCBI-ProteinID:
XP_028716655
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All DBs
Position
19:26636861..26648326
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AA seq
798 aa
AA seq
DB search
MEKLERIHPNRQVIPFLFMLVLVQVCSEPTIRYSILEETESGSFVAHLAKDLGLRSGDLS
ARSARVVCDDYKQRLLLDPENGDLLLREKLDREELCASVDPCVLHFQVSLEKPVQYFQGE
LLIQDINDHSPEFSDKEMLLKIPENSQPGTLLPLSLAQDLDVGSNGLQQYTVIPNSHFHV
LTRNHTEGKKYPELVQDRALDREQQAELSLTLIAMDGGSPPRSGTAMVRILILDINDNAP
EFVNTPYEVQVLESSPPGSPVLTVLAQDADAGTFGRVSYGLFQASDEIQQTFSINEVTGE
IRLRKKLDFEKIKSYRVQIEAIDGGGLSGKGSVVIEVVDVNDNAPELTISSLISSVPENA
PETIISIFRVGDRDSGKNGKVVCSIPENLPFILKSTFKNFYTLVTESPLDRESRAEYNIT
ITVTDMGTPRLTTQHTITVQVSDINDNAPAFTQTSYTLFVQENNSPALHIGTISATDSDS
GSNAHITYSLLPTHDPQLALDSLISINANNGQLFALRALDYEALKTFEFHVGATDQGSPV
LSSQALVRVLVLDANDNAPFVLYPLQNASVPCTELLPRAAEPGYLVTKVVAVDRDSGQNA
WLSFQLLKATEPGLFSVWAHNGEVRTSRLLSERDAPKHRLLLVVKDNGDPPRSASVTLQV
LLVDGFSQPYLPLPEVSRDPAQDNDDLLTLYLVIALASVSSLFLLSVLLFVGVRLCRRAR
AASLGGSSVPEGHFPGHLVDVSGTGTLSQSYQYEVCLTGDSGIGEFKFLKPMIPELLVQD
PGRDLKENLHCRDSFVFS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctagagagaattcacccaaacaggcaagtgattcctttcctttttatgctg
gttttggttcaggtttgcagtgagccaacaattcgatactctatcctggaggaaacagaa
agtggatcctttgtagcccatctggccaaggatctgggcctgagatctggggacctgagt
gcccggtctgcacgggtggtgtgtgatgattacaagcagcgtttgctgctggatcctgag
aatggggatctgcttctgagggagaaactagatcgggaagagttgtgtgcctctgtggat
ccctgtgtgctgcatttccaggtgtcccttgaaaagccagtgcagtattttcaaggagaa
ttactgatccaggacataaatgaccactcaccagaattctcagacaaagaaatgctcttg
aaaataccagaaaacagccagccaggcactctgttaccactaagtttagcccaggacttg
gatgtgggcagcaatgggcttcaacaatacacagtcatccccaactctcattttcatgtc
ctcactcggaatcatactgaaggcaagaaatacccagagttggtgcaggacagagccctg
gacagagagcaacaggcagagctgagtttgaccctcatagctatggatggtggctctcca
cctaggtcaggaacagccatggttagaatcctgatcctggacatcaatgacaatgcccct
gaatttgtgaacaccccctatgaggtgcaggtcctggagagcagtcccccaggctcccca
gtcctgactgtcctagcacaggatgcagatgctggcacctttgggagagtttcctatggc
ttgttccaagcatcagatgaaattcaacaaaccttctcaataaatgaagtcacaggagaa
atacgattgagaaagaaactggattttgaaaaaattaaatcttaccgtgtacaaatcgag
gccatagatggaggtggtctttctgggaaggggtcggtggtgatagaggtggtggatgtg
aacgacaatgccccagagctgaccatatcttcactgatcagctcagtcccagaaaatgct
cctgagaccataatcagcatcttcagagttggagacagggattccggaaagaatggaaag
gtggtttgttctattccagaaaacctgccattcatcctaaaatccactttcaagaatttc
tacaccctggtgacagagagtccactggacagagagagcagagctgagtacaacatcacc
atcacagtcactgacatgggcacacccaggctcacaacacagcacaccataacagtgcag
gtctctgacatcaatgacaatgccccagccttcacacaaacctcctacaccctgtttgtc
caggagaacaacagccccgccctgcacataggcaccatcagcgccacagactcagactca
ggctccaatgcccacatcacctactctctgctgcccacccacgacccacagctggccctc
gactcgctcatctcgatcaatgccaacaacgggcagctgttcgcactcagggcgctggac
tatgaggccctgaagaccttcgagttccacgtgggcgccacagaccaaggctctcctgtg
ctcagcagccaggcactggtgcgtgtgctggtgctggacgccaacgacaatgcgcccttc
gtgctctacccgctgcagaacgcctctgtgccctgcacagagctgctgcccagggcggca
gagccaggctacctggtcaccaaggtggtggcagtggaccgcgactctggacagaatgcc
tggctgtccttccagctgctcaaggccacggagcccgggctgttcagcgtgtgggctcac
aatggcgaggtgcgcacctccaggctgctgagtgagcgcgatgctcccaagcacaggctg
cttctggtggtcaaggacaatggagatcctccaaggtcagccagtgtcactctgcaggtg
ctgctggtggatggcttctctcagccctacctgcctttgccagaggtgtcgcgcgacccc
gcgcaggacaatgacgacttgctcacactgtacctggtcattgccttggcttctgtgtct
tctctcttcctgttgtctgtgctgctgtttgtgggggtgaggctgtgcaggagggccagg
gcggcctctctgggtggctcttctgtgcctgagggacactttcctggtcacctggtggac
gtcagcggtactgggaccctttctcagagctaccagtatgaggtatgtctaactggggac
tctgggattggtgagttcaagttccttaaacctatgatcccagagctgttggttcaggat
cctgggagagaccttaaagaaaatctccactgcagggatagctttgtgttcagctga
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