Peromyscus leucopus (white-footed mouse): 114686186
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Entry
114686186 CDS
T07241
Symbol
Pcdhb1
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-1
KO
K16494
protocadherin beta
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pleu04515
]
114686186 (Pcdhb1)
Cell adhesion molecules [BR:
pleu04515
]
Cadherins
Protocadherins
114686186 (Pcdhb1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Ly49
Motif
Other DBs
NCBI-GeneID:
114686186
NCBI-ProteinID:
XP_028716663
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Position
19:26555576..26558413
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AA seq
819 aa
AA seq
DB search
MMADARRKPWQNRQVGCLLFLWCVSVGSAATIRYSVAEEMESGSFVANVAKDLGLEVGKL
AERGARLVAEGNKLHFRLHRKTGDLFVKEKLDREALCGKADPCVLHFEIVLAEPLQSFRV
EVRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANAYFH
LHTRFRSHGPKYAELVLDNPLDREEQPEVNLTITAVDGGSPPKSGTANIRVVVLDVNDHV
PQFSRLVYRAQVPENSDNGSLVVVVTATDLDEGTNKQITYSLAENPEAVLQTFLVDSQTG
EVRLRGPLDFETIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTVSSVSSPLPED
SPLQTVVALFTIRDRDVRVGGKITCFLREDLPFVVKHTFRNSYSLVTDRSLDREDVSSYN
ITLVAMDTGPPNLSTETVIEVLISDINDNPPVFQEDSYILTVRENNSPAIFIGKVHAEDL
DVGENAQVTYSLLPPKSGDLSVFAYISINSDNGKLYALRTMDYEAIQDFQFVVKATDGGF
LSLSSQXTVRVVVLDDNDNRPMILYPLQNGSLPCNDLVPRSAEAGYLVTKVVAVDGDSGQ
NSWLSYHLLKATDLGLFSVQRQNGEIRTLRQISERDPMMQKLIILVQDHGQPALSTTASL
NILLVDGFSEPYLQFQDPSKHSRKVNPTTKYLVISLAVLSFLFLFSVTVIFVIHLYQKIK
HRDKLTIQEHFYDDCNFPNNLVQGRGNGSLSQPCPYDMCSATGTGNSEFRFLKRFMPNFP
FPHAXGEAKTEGDSTLPPNSKRNRPRGSEGRARIGDDYM
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagatgcgcgcagaaaaccttggcagaacaggcaggtgggatgtcttctcttt
ctctggtgtgtgtctgtgggaagcgcggccaccatccgctattcggtggcggaggagatg
gagagcggctcatttgtggctaacgtggctaaggacctggggctggaggtggggaagctg
gctgagcgcggggcgcggctggttgctgagggcaacaagttgcatttccggctccaccgc
aagaccggagatttgttcgtcaaggagaaactggatcgcgaggcactctgtggcaaagct
gacccatgcgtgctgcactttgaaattgttctggcagagcctctgcagtccttccgtgtg
gaagtcagagtatttgatatcaatgacaatgccccagtttttctaaacaaggagcctctt
ttaaagattcccgagagcacccctttgggctcacgctttccactgcagagcgcccaggat
ctagacgtgggactcaatggtctccaaaactacaccctgagtgcaaacgcctatttccac
ctgcacacacgcttccgaagccatgggcccaaatatgcggaacttgtgctggataatcct
ctggatagagaggagcagcctgaagtcaacttgaccattacagcagtggatggcgggtcc
cctcctaagtctggcactgccaatattcgagtggttgtcctggacgtcaacgaccacgtg
ccccagttctctcgtctggtgtaccgcgctcaggtgccagagaacagcgacaacggctct
ttagtggtggtggtgactgccacggacctggatgagggcaccaacaagcagataacttac
tctttagctgaaaatccggaagcagttctccagacatttcttgtcgattcgcaaactgga
gaggtacgactccgagggcccctagattttgaaaccatagaaacatatgacattgacatt
caagctacagatggagggggcctttctgcccacagcaaagtcttggtggaagtggtggat
gtaaatgacaatcctccggaagtgacagtctcctcagtgtctagccctcttcctgaggac
tctccgctccagactgtagtggccctcttcactatccgagatcgggatgtgcgagttgga
ggaaaaatcacctgcttcctcagagaagacttgccctttgtagtcaaacacacattccgg
aattcttactcgctggtcactgacagaagcttggatagggaggatgtctctagctataac
atcaccctcgttgctatggatactggaccacccaacctgtccacagagacagtgattgaa
gtgctaatatcagacataaatgacaatcctccggtctttcaggaggactcctacatcttg
actgttcgtgaaaacaacagccctgccatttttattggcaaagtccacgctgaggaccta
gacgtgggtgaaaatgcccaggtaacatactccctgctgcctccgaagagtggagatctg
tcagtctttgcttacatctctataaattcagacaacggaaagctctacgcactaagaacc
atggattatgaggccatccaagattttcagtttgtggtaaaggcaacggatgggggtttt
ctgtcactgagtagccagnctactgtcagagtggttgtcctcgatgacaatgacaatcgt
ccgatgatcttgtacccactgcagaatggcagtttgccctgcaacgacctggtgcccagg
tctgcagaggcaggttacctggtgaccaaagtggtagctgttgatggtgactccgggcag
aattcttggctttcataccatctccttaaagccactgaccttgggttattttctgttcag
agacaaaatggggaaatacgtacactgaggcagatatctgagagagatccgatgatgcag
aaactgatcattcttgttcaggatcatggccaacccgctctctccactactgcctcactc
aacatcctgctggtagatggcttttcagagccttacttacagttccaggatccatccaag
cattctagaaaggtaaatccaaccacaaaatatttggtcatttctctggccgtgctttct
tttctttttctcttctctgtcactgtgatttttgttatacacctctaccagaagattaaa
cacagagacaaactcacgattcaggagcacttctacgatgactgtaatttccctaacaat
ttggtgcaaggaagaggcaatggttccttatcccagccttgcccatatgatatgtgctca
gccactggaactggcaatagtgagttccgttttcttaagcgatttatgcccaatttccct
ttcccccatgccnccggagaggcgaaaacagagggtgattctactttgcctccaaattct
aaaagaaatcggcctcggggttcagagggccgtgcccggataggtgatgactatatgtaa
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