KEGG   Peromyscus leucopus (white-footed mouse): 114686246
Entry
114686246         CDS       T07241                                 
Symbol
Hltf
Name
(RefSeq) helicase-like transcription factor isoform X2
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pleu04121]
    114686246 (Hltf)
   03400 DNA repair and recombination proteins [BR:pleu03400]
    114686246 (Hltf)
Enzymes [BR:pleu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     114686246 (Hltf)
Ubiquitin system [BR:pleu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    114686246 (Hltf)
DNA repair and recombination proteins [BR:pleu03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    114686246 (Hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 DEAD ResIII zf-RING_UBOX zf-RING_2 RING_XB3-XBAT31 zf-RING_5 zf-ANAPC11 zf-C3HC4_4 HDA2-3 Prok-RING_4 zf-rbx1 zf-Nse zf-RING_6
Other DBs
NCBI-GeneID: 114686246
NCBI-ProteinID: XP_028716739
LinkDB
Position
6:215796..309115
AA seq 992 aa
MSWMFKRDPVWKHLQSVQYGDHGNFPRLSYPTFFPRFEFQDVIPPDDFPTTGDEELDSVL
FGTLRGQVVGLRYYTGVVNNNEMVSLQREPNNPYDKNAIKVNNVNGNQVGHLKRDLAAAL
AYIMDNKLAQVEGVVPFGANNAFTMPLHMTLWGKEENRKVVLDQLKKHGFKLSPTPKTLG
LSLENNWGSRRAGPSYTMPGHVTVQMTTEQLKMEFDKLFEDLKEDGKTNEMEPAEAIETP
LLPHQKQALAWMISRENSKELPPFWEQRNDLYYNTITNFCEKERPENVHGGILADDMGLG
KTLTAIAVILTNFADGKSLLSKRSKKNQPRKEYKEETGKLRGSNTDKEADGLSAEPSRYS
EEPGVSDIQEKNKYPMSELSSFCPKRRKIAVQYIESIDSEEIETSGPPQKMKGSSKVKED
TKFAHALTLSALATKKKMLKKGVSVVERSKKCDTGERTRTTLIICPLSVLSNWIEQFGQH
IKSEVHLNFYVYYGPDRIREPAFLSKQDIVLTTYNILTHDYGNKDDSTLHSIKWLRVILD
EGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKLKPFIDREWWHRT
IQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQHITLSEEERKI
YQSVKNEGKATIGRYFTEGTVLAHYADVLGLLLRLRQICCHTHLLTNGMSSSGLSGNNTP
EELRKALIKKMKLILSSGSDEECAVCLDSLTVPVITHCAHVFCKPCICQVIQSEQPHAKC
PLCRNNIRGDNLLECPPEELACDNEKKSNMEWTSSSKINALMHALIELRTKNPNIKSLVV
SQFTTFLSLIETPLKASGFMFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGV
GLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTK
RELAAGAFGTKKTDANEMKQAKINEIRTLIDL
NT seq 2979 nt   +upstreamnt  +downstreamnt
atgtcctggatgttcaagagggatcctgtttggaagcatttgcagtctgtccagtatgga
gaccatggaaattttccaagactttcatacccaactttctttccacgttttgaattccaa
gacgttatccctccagatgacttcccaacaactggtgatgaagagctagattccgtttta
tttggaactttgagaggtcaagttgttggactacgctattatacaggagtagtaaataat
aatgaaatggtttctttacaacgagagcctaataatccctatgataagaatgcaattaaa
gtaaataatgtgaatggaaatcaggttggccatttaaagagagatcttgcagctgccttg
gcctatatcatggacaacaaattggcacaagtggaaggggtagttccttttggtgcaaat
aatgcttttaccatgccacttcatatgactctttggggaaaagaagaaaatagaaaagtg
gttttagatcagttgaagaaacatggatttaaattgagtccaacaccaaaaactctagga
ttgagtttggagaataattggggctctagaagagctggaccaagctatactatgccaggt
catgttacagtacagatgacaactgaacagctcaaaatggaatttgacaaattatttgaa
gatttaaaagaagatggtaaaactaatgaaatggaaccagctgaggctattgaaacccca
ttgcttccacaccaaaaacaagctctggcttggatgatttcacgagagaacagcaaagag
cttcctccattctgggaacagcgaaatgacttatattataacacaataacaaatttttgt
gagaaggaacgaccagaaaatgtccatggaggaattttagctgatgatatgggtttgggc
aaaactcttactgccattgcagtaattcttaccaactttgctgatggcaagtctcttctc
agtaaaagaagcaagaagaatcaaccaagaaaggaatacaaggaggagactggtaaactc
agagggagtaatactgacaaagaggcagatggactaagcgcagagccatccagatatagt
gaagaacctggtgtttcagatattcaggagaagaataagtatcccatgtcggaattgtct
agtttctgccctaaaagaagaaaaattgctgttcagtacattgaaagcattgattcagag
gaaattgaaactagtggacctccacagaaaatgaaaggatcatctaaggttaaagaagat
acaaaatttgctcatgcacttactttatctgcccttgcaacaaagaagaaaatgttgaaa
aagggggtatctgtggtggagcgctcaaaaaaatgtgacactggagagaggacaagaaca
acactgatcatctgtccactttctgtgctgagcaattggattgaacaatttggacaacat
ataaaatcagaagtgcacttgaatttttatgtttattatggtcctgatcgtataagagaa
ccagccttcctttcaaaacaggatattgttttgactacttataatattttaactcatgat
tatggaaataaagatgacagtacattgcatagcataaaatggctaagagtgatcctggat
gaaggacatgccatacgaaatccaaatgctcagcagacaaaagctgtacttgacttagag
gcagaaagaagatgggtattgacaggtactcctatccagaattctttaaaggacttgtgg
tctcttctgtcctttttaaaacttaaaccatttattgatagagaatggtggcatagaaca
atacagcgtcctgttacaatgggagatgagggaggacttaggcgtttacagtccttaatt
aaaaatatcacacttcgaagaacaaagacaagcaaaattaaagggaaacctgttttggag
ttaccagaaaggaaagtatttattcagcacattacactttcagaagaagagagaaagatt
tatcagtctgttaaaaatgaaggcaaagctaccattggaaggtattttactgaagggact
gttcttgcacactatgcagatgttttgggtcttctgcttagattgcggcagatttgttgt
catactcatcttcttacaaatggaatgtcttcaagtggtctttccggaaataatacacct
gaagaactgagaaaggcattaataaagaagatgaagttaattctgagctctggttcagat
gaagaatgcgcagtttgcctggattcattaacagttcctgtgataacacattgtgcacat
gttttttgtaaaccttgtatttgccaggtcattcaaagtgagcagccacatgctaaatgc
cctttatgcagaaataatatacgtggagataatttattagaatgtcctccagaagaattg
gcatgtgacaatgagaaaaagtccaatatggaatggacatccagttcaaagattaatgct
ctaatgcatgctttgattgaattaaggacaaagaaccccaacataaaaagtttagttgtt
tctcagtttaccacattcctgtctttaatagaaacaccacttaaagcctcaggattcatg
tttactcgtttagatggttccatggctcaaaagaaaagagttgaatcaattcaatgtttt
caaaacacagaagcaggatctcccactataatgttactgtccttaaaagcaggtggagtt
ggcttgaatctttgtgcagcttctcgagtgttcttaatggatccagcctggaaccctgct
gcagaagatcagtgctttgacagatgccatcgacttggccagaagcaagaggttatcatc
acaaaattcattgtaaaggattctgttgaagaaaatatgttgaaaatacaaaacacaaaa
agagaacttgcagctggagcttttggaactaaaaaaacagatgctaatgaaatgaaacaa
gctaaaatcaatgaaatcagaactttaattgatttataa

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