KEGG   Peromyscus leucopus (white-footed mouse): 114686454
Entry
114686454         CDS       T07241                                 
Name
(RefSeq) nucleoporin SEH1-like
  KO
K14299  nucleoporin SEH1
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu03013  Nucleocytoplasmic transport
pleu04150  mTOR signaling pathway
pleu05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114686454
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    114686454
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    114686454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pleu03019]
    114686454
   04131 Membrane trafficking [BR:pleu04131]
    114686454
Messenger RNA biogenesis [BR:pleu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     114686454
Membrane trafficking [BR:pleu04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    114686454
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_WDR3_2nd Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N EIF3I Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 114686454
NCBI-ProteinID: XP_037056498
LinkDB
Position
8b:40776704..40778257
AA seq 363 aa
MRARQTAVAAMFVARSIAADHKDLIHGRQMATCSIDQSVKVWDKSESGDWHCTASWKTHS
GSVWHVLWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVT
DVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISYKLSCSCISWNPSSSRA
HSPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKTETLMTVTDPVHDIAFAPNLGRSFHI
LAIATKDVRIFTLKPVKKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWDITGTVLASSG
DDGCVRLWKANYMDNWKCTGILKGNGSPVNGSSQLGSSNPSLSSNIPNLQNSLNGSSAGR
KHS
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgcgggccaggcagacggcggtggcggccatgtttgtggcgcgcagcatcgcggcggac
cacaaggacctcatccacgggcgccagatggccacctgctccatcgaccagagcgtcaag
gtctgggataaaagtgaaagcggagattggcattgtactgctagttggaagacacacagt
ggatctgtatggcacgtgctgtgggctcatcctgagtttggacaagttttggcttcctgt
tcttttgaccgaacagcagctgtctgggaagaaatagtcggagaatcaaatgacaaactc
cgaggacagagtcactgggtgaagaggacaactctagtggacagcagaacatctgttact
gatgtgaaatttgctcccaaacacatgggtctgatgttagcaacctgttcagcagacggc
atagtaagaatatatgaggccccagatgttatgaatctcagccagtggtctctacagcat
gaaatctcctataagctgagctgtagctgtatttcttggaacccttccagctctcgcgct
cactcgcccatgatcgctgtgggaagtgacgacagcagccccaatgcaatggccaaggtg
cagatatttgaatacaatgaaaacaccaggaaatatgcaaaaacggaaacccttatgacc
gtcacagatcctgttcacgatattgcgtttgccccgaatttgggaagatctttccatatc
ctggcaatagcaaccaaagatgtaagaattttcacactaaaacctgtaaagaaagaactt
acttcttctggtggtcccacaaaatttgaaatccacatcgtggctcagtttgataatcat
aattctcaggtctggagggtgagttgggacataacaggaacagtactcgcatcctcagga
gatgacggctgtgtgaggttgtggaaagccaattacatggacaactggaagtgtactggt
attttgaaaggtaatgggagcccagtaaatgggagttctcagctgggaagctcaaatcct
tcactaagctcaaatattccaaatcttcaaaactcattaaatggatcttctgctggcaga
aagcacagctga

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