Peromyscus leucopus (white-footed mouse): 114686641
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Entry
114686641 CDS
T07241
Symbol
Ss18
Name
(RefSeq) LOW QUALITY PROTEIN: protein SSXT
KO
K15623
protein SSXT
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03082
ATP-dependent chromatin remodeling
pleu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114686641 (Ss18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
114686641 (Ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pleu03036
]
114686641 (Ss18)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114686641 (Ss18)
GBAF(ncBAF) complex
114686641 (Ss18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
114686641
NCBI-ProteinID:
XP_028717110
LinkDB
All DBs
Position
19:complement(5427430..5501938)
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AA seq
417 aa
AA seq
DB search
MSVAFAAPRQXGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECGQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMSQSGPPPPPRSHNMPSDGMVAGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGGQHYQGQQPPMGMMGQVNQ
GSHMMGQRQMPPYRPPQQGPPQQFSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQYPGQ
QQGYGPSQGGPGPQYPNYPQGQGQQYGGYRAAQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcgttcgcggccccgaggcagncgggcaaaggggagatcacgcccgccgcc
atccagaagatgctggatgaaaacaaccatcttattcagtgtataatggactatcagaac
aaagggaagacatcagaatgtgggcagtatcagcagatgttgcatacgaacctggtatac
ctcgctacaatagcagattctaatcaaaatatgcagtctctgctgccagcaccgcccaca
cagaatatgcctatgggtcctggagggatgagtcagagcggccctccgccccctccccgc
tctcacaacatgccttcagatggaatggtggctgggggccctcctgccccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgccaatgcagggacctggaccc
aatcagctcaacatgacaaacagttccatgaatatgccttcaagtagccatggctccatg
ggaggttacaaccattccgtgccatcatcccagagcatgcctgtgcagaaccagatgaca
atgagtcaggggcagccgatgggaaactacggccccagaccaaacatgaatatgcaacca
aatcaaggtcccatgatgcatcagcaacctccttcccagcagtacaacatgccacctgga
ggtgggcagcactaccaaggacagcagccgcccatgggcatgatgggtcaagttaaccaa
ggcagccacatgatgggccagagacagatgcctccatatagaccaccacagcagggccca
ccacagcagttctcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcagtattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaactcacagtatggccagcagcaggacgcttaccaaggaccgcca
cctcagcaaggctacccaccccagcagcagcagtacccggggcagcagtacccagggcag
cagcagggctacggtccttcccagggcggtccaggtcctcagtatcctaattatcctcag
ggtcaaggtcagcagtatgggggctacagagcggcacagccgggaccaccccagccaccc
cagcagaggccttatgggtacgaccagggacaatatggaaattaccagcagtga
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