Peromyscus leucopus (white-footed mouse): 114686833
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Entry
114686833 CDS
T07241
Name
(RefSeq) LOW QUALITY PROTEIN: SNW domain-containing protein 1-like
KO
K06063
SNW domain-containing protein 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03040
Spliceosome
pleu04330
Notch signaling pathway
pleu05169
Epstein-Barr virus infection
pleu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114686833
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114686833
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
114686833
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
114686833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pleu03041
]
114686833
Spliceosome [BR:
pleu03041
]
Complex B
Other components
Prp19-related factors
114686833
Complex C
114686833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Amidohydro_1
Motif
Other DBs
NCBI-GeneID:
114686833
NCBI-ProteinID:
XP_028717343
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Position
14:complement(55600586..55658694)
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AA seq
662 aa
AA seq
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MPHYVLLLIKNDEALVWQWAKAGKREGEGRDAGACAVSTSSIVFLVPGKTRPATLWLALE
EAEEDGAHQRDPGRDHGYNLSRASLATRPRQSRGLSLEASRVELALSLGREPRRGLVRRS
SRVLRVSSAAAFLPAPTQLSQDQLEAEERARSQRSRQTSLVSSRREPPPYGYRKGWIPRL
LEDFGDGGAFPEIHVAQYPLDMGRKKKMSNALAIQVDPEGXIKYDAIARQGQSKDKVIYS
KYTDLVPKEVMNADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPA
QYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPS
RKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIA
DRKAREAVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDE
IRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRTSNEVQYDQRLFNQ
SKGMDSGFADGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYGDDLETRIKTNRFVP
DKEFSGSDRRLRGREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKKRR
KE
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgccacactatgttcttctgctcatcaagaatgatgaggctctggtgtggcaatgggcc
aaggcaggaaagagagagggcgaggggagagatgcgggcgcctgcgcagtgagcacttct
tccattgtgttcctcgttcccggcaagacccgccccgcgacgctgtggcttgcgctggaa
gaagcggaagaagatggcgctcaccagagggaccccggccgagaccatggctataacctc
tcgcgggcttccttggcgactaggccgcgccaaagccggggtctctctttagaggcttcc
cgggttgagttagccctttccctgggccgagagccacggcgtggcctcgtgcggaggagc
tcacgtgtgcttcgcgtaagcagcgcggcagcttttttacctgcgcccactcagctatct
caggaccaacttgaagctgaagaaagagcaagatctcagagatcgcggcagacctcgctg
gtctcctctcgaagggagcctcccccatacggataccggaaaggctggattccgcgcttg
ttagaagattttggagatggaggtgctttcccagaaatccatgtggcccagtatccactg
gatatggggcgaaagaaaaaaatgtcgaatgccctggccattcaggtggaccctgaagga
nagattaaatacgatgcaattgcgcgacaggggcagtccaaagacaaggtcatttacagc
aaatacactgacctggttccaaaggaggttatgaatgcagatgacccagacctgcaaagg
cctgatgaagaggctattaaagagataacggagaagacaagagtagccttggagaagtcc
gtatcgcagaaggttgctgcagccatgccagttcgtgcagctgacaagctggctccggct
cagtatatccgctatacaccatctcagcaaggagtagcattcaactctggagctaaacag
agagttattcggatggtagaaatgcagaaagatccaatggagcctccaagattcaagatt
aataagaaaattccccggggaccaccatctcctcctgcacctgtaatgcattctcctagt
cgaaagatgactgtcaaggaacaacaggagtggaagatccccccgtgtatttccaactgg
aagaacgcaaagggttacacaattcctctggataaaaggctggctgctgatggaagagga
cttcagaccgtacacatcaacgaaaattttgccaaactggctgaagctctgtacattgct
gatcggaaggctcgggaagctgtggaaatgcgagcccaagtggagagaaagatggctcaa
aaagaaaaggagaaacacgaagagaagctcagagagatggcccagaaagcccgagagagg
agagctgggatcaaaacccatgtggaaaaagaggatggagaagcgcgagaaagggatgaa
atccgtcatgacaggcggaaagagagacagcatgaccggaacctctccagggcggcgcct
gataagaggtcaaaactgcagagaaatgaaaatcgagatatcagtgaagtcattgctctc
ggtgtgcccaaccctcgcacttcgaatgaagttcagtacgaccaaaggctcttcaaccaa
tccaagggtatggacagtggatttgcagatggagaagatgaaatttataatgtgtatgat
caggcctggagaggcggtaaagatatggctcaaagtatctacaggccgagtaaaaatctg
gacaaggatatgtatggtgatgacctagagaccaggataaagaccaacagattcgttcct
gataaggagttttctggttcagaccgtagactgagaggccgagagggaccagttcagttt
gaggaagatccttttggtttggacaaatttttggaagaagccaaacagcatggtggttct
aaaagaccctctgatagcagtcgcccgaaggaacatgagcatgaaggcaagaagcggagg
aaggagtag
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