Peromyscus leucopus (white-footed mouse): 114686891
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Entry
114686891 CDS
T07241
Name
(RefSeq) tripartite motif-containing protein 30A isoform X1
KO
K10648
tripartite motif-containing protein 5 [EC:
2.3.2.27
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03250
Viral life cycle - HIV-1
pleu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114686891
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
114686891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pleu04121
]
114686891
Enzymes [BR:
pleu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114686891
Ubiquitin system [BR:
pleu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114686891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-RING_6
zf-RING_5
zf-C3HC4_3
zf-RING_10
zf-Nse
zf-ANAPC11
zf-RING_4
U-box
Amino_oxidase
Motif
Other DBs
NCBI-GeneID:
114686891
NCBI-ProteinID:
XP_028717390
LinkDB
All DBs
Position
1:100397148..100417005
Genome browser
AA seq
536 aa
AA seq
DB search
MASSVLVMIQEEVTCPICLELLKEPVSADCDHSFCRACITLNYESSKVNEGEGICPVCRV
SYQFGNLKPNRQLANIVGKLTGFKSSPEEEQKVNVCAQHGEKLQLFCEKDKVAICWLCER
SQEHRGHQIALIEEVAQEYRGKLQATLQKLVANEKICDEWEDDLQEERTFWKNQIQGDVE
KVQMEFKGLREFLDSKEKNEVQKLKQEEEDIMNSLAESERELVKQRESLRALISDVEHQL
QCSTMEMLQGMNSVLTRSQTLVLKLPDIVLRKQRTIFRAPDLKGMLQVFQGLMDAQHYWV
HVTLHGAHDKNIVIDKDKGEIQHRDVNRKNPQVSKTYKLGVLGYPAIYSGKHYWEIDVSR
SDAWLLGLNDGKRSQPKLHVPNEKGSKVKYNPDFKQYAYFMSKYGSDYKDYDSDYEQHDY
QPKYKVKDDSHVKKHVNYQPKYGYWVIGMKNGSVYNAFEECSVTHNGSVLVLSLIRRPSR
VGVFLDREACTLSFFDVSNHGALIYRFCEASFPKAVYPYFNPMESSEPMTVCGPPS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcctcatcagtcctggtgatgatccaggaggaggtgacctgtcccatctgcctggag
ctcctgaaggaacctgtgagtgctgattgtgaccacagcttctgccgagcctgcatcaca
ctgaactatgagtccagcaaagtcaatgaaggggagggcatctgccctgtgtgccgagtg
agttaccagtttgggaatctaaagcctaatcgacaattggccaacatagtggggaagcta
acagggttcaagtccagcccagaggaggagcagaaggtgaatgtctgtgcacaacatgga
gagaaactccagctcttctgtgagaaggacaaggtggccatctgctggctttgtgagcgg
tctcaggagcaccgtggtcaccaaatagctcttattgaagaggtggcccaagagtacagg
gggaagctccaggcaactctgcagaaactggtggcaaatgaaaaaatatgtgatgagtgg
gaagatgaccttcaagaggagagaactttctggaagaaccaaatacagggtgatgtagaa
aaagttcagatggagtttaaaggacttcgggaattcctggactccaaggagaagaatgag
gtgcagaagctgaagcaggaggaggaagacattatgaacagcctggcagagtctgaaaga
gagctggtgaagcagagggagtcattgagagccctcatctcagatgtggagcatcagttg
cagtgctcaaccatggaaatgctgcagggtatgaattctgttctaacaaggagtcagacc
ttagttctgaaactgcctgatatcgtcctgagaaaacagagaacaatcttccgagctcca
gatctgaaaggcatgctgcaagtgtttcaagggctcatggatgctcaacattactgggtt
catgtgaccctgcatggagcccacgataaaaacattgtcattgataaggacaaaggagaa
atacaacatcgagatgttaacagaaaaaatccacaagtttctaagacctataagttgggt
gtcctgggatatccagctatctactcagggaaacattactgggaaatagatgtgtctaga
agtgatgcctggctcctgggattaaatgatggaaaacgttctcaacccaaacttcatgta
ccaaatgaaaagggcagcaaggtcaaatataatcctgattttaaacaatatgcatatttt
atgtctaaatatggctctgactacaaagattatgattctgattatgaacaacatgactat
cagcctaaatataaagttaaagatgattctcatgtgaaaaagcatgtaaattatcaacct
aaatatggctactgggttatagggatgaagaatgggtctgtatataatgcctttgaagaa
tgttctgtcactcacaatggcagtgtcttggtcctctctttgattcgtcgtcccagtcgt
gttggagttttcctggacagagaagcttgtactctctcattttttgatgtttccaaccat
ggagctctcatctatagattctgtgaagcttccttccctaaggcagtttatccatatttt
aatcctatggaatcttcagagccaatgacagtatgtgggccaccctcctaa
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