Peromyscus leucopus (white-footed mouse): 114686895
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Entry
114686895 CDS
T07241
Name
(RefSeq) tripartite motif-containing protein 30A-like
KO
K10648
tripartite motif-containing protein 5 [EC:
2.3.2.27
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03250
Viral life cycle - HIV-1
pleu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114686895
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
114686895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pleu04121
]
114686895
Enzymes [BR:
pleu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114686895
Ubiquitin system [BR:
pleu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114686895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
zf-Nse
zf-RING_5
zf-RING_6
U-box
zf-RING_10
GVIN1
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
114686895
NCBI-ProteinID:
XP_028717398
LinkDB
All DBs
Position
1:100484042..100502548
Genome browser
AA seq
500 aa
AA seq
DB search
MASEFLMNVKEEVTCPICLDLMVEPVSADCGHSFCRTCITLNCESIKGKEGEFTCPVCRV
SYLFGNLRPNRHLANIVERLKGFKSSPEGEQKMNVCARHGEKLQLFCEKDKVAICWLCER
SQEHRGHQTALIEEVAQEYKGKLQAALQKLMADKKELENWKDDLQKERTFWENQIQKDVE
NVQMEFRRLGDILDSEEKNEVQKLMQEKKDIMNSLAESENKHAQQSKLLGDLISDVEHHL
QCSTMEMLQGVDGIIKWSHSFSLTKSKTIPKEGRRVFRAPDLRGMLQVLQELIEAQRYWV
QVTLVKNNNPNIAITEDKRQIRYEDRQARNFAPGGESCHEGVLGYPAIQSGKHYWEVDVS
GKGAWVLGLSDGSYLFNPIFRSNAERHLDPLFRLGISNDSRYQPRYGFWVIGLWNKCVYN
AFEECAFTGKPSVLTLSLMVPPCRVGIFLDYAAGTLSFYNISHHGTLIYRFCANSFPDRV
FPYFNPMGCSEPMTVCWSDS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaattcttgatgaatgtaaaggaggaggtgacctgtcctatctgtctggac
ctcatggtggaacctgtgagtgctgattgtggtcacagcttctgccgaacctgcatcaca
ctgaactgtgagtctattaaaggcaaagagggagagttcacctgccctgtgtgccgagtg
agttacctgtttgggaatctgaggcctaatcgacatttggccaacatagtggagaggctc
aaggggttcaagtccagcccagagggggagcagaagatgaatgtctgtgcaaggcatgga
gagaaactgcagctcttctgtgagaaggacaaggtggccatctgctggctttgtgagcgg
tctcaggagcaccgtggtcaccaaacagctctcattgaagaggtggcccaagagtacaag
gggaagctccaggcagctctgcaaaagctgatggcagacaagaaagaattggagaactgg
aaagatgaccttcaaaaggagagaactttctgggagaatcaaatacagaaagatgtagaa
aatgttcagatggagtttagaagactgggagacatcctggactctgaggagaagaatgag
gtgcagaagctgatgcaagagaagaaagacattatgaacagcctggcagagtctgaaaat
aagcatgcccagcaaagcaagttgctaggagacctcatctcagatgtggagcatcacttg
cagtgctcaaccatggaaatgctgcagggtgtggatggcatcataaaatggagtcacagt
ttctcactcacgaagtccaaaaccatccccaaggaaggaagaagagtgttcagagcccct
gacctacgaggcatgctgcaggtgctgcaagagctcatagaggcccaacgctactgggtt
caagtgacactggtcaagaacaacaatccaaacattgccattaccgaggacaagagacaa
ataagatatgaagaccgtcaagcaagaaattttgcacccgggggtgagagctgtcatgaa
ggtgtcctgggctacccagctatccagtcaggaaaacattattgggaagtagatgtgtct
ggaaaaggtgcctgggttctgggattaagtgatggaagctacctcttcaatccgatattt
cgttcaaatgctgaaagacacctagatcccttattccgcttgggtattagtaatgattca
cgttatcaacctagatatggcttctgggttatagggctgtggaataagtgcgtgtataat
gcctttgaggagtgtgctttcacaggcaagcccagtgtcttgactctatctctgatggtt
cctccctgtcgtgttggcattttccttgactatgcagctggcaccctctcattttacaat
atttcccaccatgggactctcatctatagattctgtgcaaattcctttcctgatagggtt
ttcccatattttaatcctatgggatgttcagagccaatgacagtgtgctggtcagactct
taa
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