Peromyscus leucopus (white-footed mouse): 114686898
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Entry
114686898 CDS
T07241
Name
(RefSeq) tripartite motif-containing protein 30A-like
KO
K10648
tripartite motif-containing protein 5 [EC:
2.3.2.27
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03250
Viral life cycle - HIV-1
pleu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114686898
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
114686898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pleu04121
]
114686898
Enzymes [BR:
pleu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114686898
Ubiquitin system [BR:
pleu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114686898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
Motif
Other DBs
NCBI-GeneID:
114686898
NCBI-ProteinID:
XP_028717400
LinkDB
All DBs
Position
1:100379681..100387753
Genome browser
AA seq
385 aa
AA seq
DB search
MGFSCMASKGSSPTKHTAYSATIPLPQGKVQAAMQEERANQKRYDEWEDDLRKERTFRKC
KVSSDEDRVQMEFKGLQEFLDSKEKNELQKLKQEEEDIMNSLARSQRKLVKQRRSVRALI
SALEHQLQCPAMEMLQGGNSVLTRSQTLRLKRPDMVPGKQRMIFRTPDLKGMLQVFQGLM
DAQKYWVHVTLYQGHNKNVVINEDKKEIQHGNGFRRNLQISETYDFGVLGYPPFYSGKHY
WEVDVSRNDAWLLGLNDGERAQPQLCAGNENGIKVQYNPDAKQHVNYQPKYGYWVIGMKN
GSVYNAFQECSVTHNASVLVLSLTGRPSRIGVFLDREACTLSFYDVSNHGVLIYRFYEPS
FPDEVYPYFNPMSCSEPMTVCGPPS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgggcttttcatgtatggcttcaaagggcagcagtcctactaagcacacagcttactct
gctaccattcctctcccacaggggaaggtccaggcagctatgcaggaagagagggcaaat
cagaaaagatatgatgagtgggaagatgaccttcgaaaggagagaactttccggaagtgc
aaagtaagtagtgatgaagacagagttcagatggagtttaaaggacttcaggaattcctg
gactccaaggagaagaatgagctgcagaagctgaagcaggaggaggaagacattatgaac
agcctggcacggtctcaaaggaagctggtgaagcagaggaggtcagtgagagccctcatc
tcagctctggagcatcagttgcagtgcccagccatggaaatgctgcagggtgggaattct
gtcctaacaaggagtcagaccttaagactgaaacggcctgatatggtcccaggaaaacag
agaatgatctttcgaactccagatctgaaaggcatgctgcaagtgtttcaagggctcatg
gatgctcaaaaatactgggttcatgtgaccctgtatcaaggccacaataaaaacgttgtc
attaatgaggacaaaaaagaaatacaacacggaaatggttttagaagaaatttgcaaatt
tctgagacctatgattttggtgtcctgggatatccaccgttctactcagggaaacattac
tgggaagtggatgtgtctagaaatgatgcctggctcctgggattaaatgatggagaacgt
gctcaaccccaactttgtgcagggaatgaaaatggcatcaaagtccaatataatcctgat
gctaaacaacatgtaaattatcagcctaaatatggctactgggttatagggatgaagaat
gggtctgtatataatgcctttcaagagtgttctgtcactcacaatgccagtgtcttggtc
ctttctctgactggtcgtcccagtcgcattggagttttcctggacagagaagcttgtact
ctctcattttatgatgtttccaaccatggagttctcatctatagattctatgaaccttcc
ttccctgatgaagtttatccatactttaatcctatgtcatgttcagagccaatgacagta
tgtgggccaccctcctaa
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