Peromyscus leucopus (white-footed mouse): 114686901
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Entry
114686901 CDS
T07241
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 34A-like
KO
K11999
tripartite motif-containing protein 6/22/34
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pleu04121
]
114686901
Ubiquitin system [BR:
pleu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114686901
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_10
zf-C3HC4_3
zf-UDP
zf-RING_6
zf-RING_2
YceG
PRY
DUF4840
PMEI
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
114686901
NCBI-ProteinID:
XP_028717403
LinkDB
All DBs
Position
1:complement(100504774..100517207)
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AA seq
487 aa
AA seq
DB search
MASAVPMRVQKEAICPXCQELLKEPLRLGCGHNVCQACIPMNRKNAVINPRGESSCPVCG
TRFSFENLQASQHLADIVERLREVELNPDFEKKRDLCIHHGEKLRLFCKEDRKVICWVCE
RSREHHGHHTFLQEEAVKECQENLQTALQRLREEQKKAEKLEADIKEDRISWKCQIQTER
QRILTGFDELRRILNEEEQRELKRLQEEEQLILASLAEAEAELAQQSQLVEELISDLEHR
CQWSTTELLQDMSGVLKWSQIWTLKKPKAVSKKLKKIFQAPDLRDMLCKFRKLTAVRGYW
ADFTFNPENLNLNLILSEDHRQVTSVPIWPFKCYNNGVLGSKCFFSGKHYWEVDVSKKSA
WTLGVYARKRKNLKFDVRRGKNEPNVYHRYKPQNGYWVIGLQDGSKYSIFEDSSNCDPTV
LTPFVAVPLHRVGVFLDCEEGIVSFFNVTNHGSPIYTFSQCCFSKPVYPYFNPWDCPAPM
TLCLLNS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagcagttccaatgcgtgtacagaaggaggccatttgcccantctgccaagag
cttttgaaagaacccctgaggttaggctgtggccacaatgtatgccaagcctgcatcccc
atgaacagaaagaatgcagtgatcaaccccagaggagaaagcagctgtcctgtgtgtggt
actagattctcatttgaaaatctacaggccagtcagcatctggcagacatagtagagaga
ctcagggaagtcgagttgaaccctgactttgagaaaaagagagatctctgtatacaccat
ggagagaaactacgtctcttctgtaaggaagacaggaaggtcatttgctgggtttgtgag
cgttctcgggagcatcatggtcaccacaccttcctccaggaggaagcagtcaaggagtgt
caggagaatctccaaacagctctccagaggctgagggaggagcaaaagaaggcggagaaa
ttggaagctgacatcaaagaagacagaatttcttggaagtgccagatccagactgagaga
caaaggatactaacgggttttgatgagctcagaagaatcctgaatgaagaggaacagaga
gagctaaaaagacttcaggaagaggagcagctgatacttgccagcctggcagaggcggag
gctgagctagctcagcagagccagttggtggaggaacttatctcagatctggagcaccgg
tgccagtggtcaactacagagctgctacaggatatgagcggtgtcttgaaatggagtcag
atctggacactgaagaagccaaaagcagtttctaagaagctgaagaagatattccaagct
cctgatctgagagacatgctctgcaagttcagaaagctaacagctgtccgtggctactgg
gcggacttcacatttaatccagaaaacctaaatttgaatcttattctttcagaagatcac
agacaagtgacatctgtgcccatttggccatttaagtgttataataatggtgtcttgggc
tccaaatgtttcttctcaggaaaacattactgggaagtggatgtgtctaagaagagtgcc
tggactctgggagtttatgctagaaaacgtaaaaatttaaagtttgatgttagacgaggc
aaaaatgagccaaatgtttaccacagatacaaacctcagaatggctactgggttataggg
ttacaggatggatcaaagtatagtatctttgaggattcttccaactgtgaccctacagtt
ctgaccccctttgtggctgtccctctccatcgggttggggttttccttgactgtgaagag
ggcatagtgtccttctttaatgtcacaaaccacgggtcacccatttacacattctctcaa
tgctgcttttccaaacctgtgtatccatacttcaatccttgggactgcccagcccccatg
accctgtgtcttctgaactcctga
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