KEGG   Peromyscus leucopus (white-footed mouse): 114687009
Entry
114687009         CDS       T07241                                 
Symbol
Mdc1
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pleu03400]
    114687009 (Mdc1)
DNA repair and recombination proteins [BR:pleu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    114687009 (Mdc1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 114687009
NCBI-ProteinID: XP_028717546
LinkDB
Position
16_21:complement(7338211..7352234)
AA seq 1675 aa
MENTQVINWDADEEEETEVSSGSLGYSLEPIGRLRLFSSAHGPERDFPLYLGKNVIGRSP
DCSVALPFPSISKQHAVIEISACNKAPILQDCGSLNGTQLIKPPKVLTPGVSHRLRDWEL
ILFADFPCQYHRLDVPPPLVSRGLLTIEKTPRIQGGSQTSRVLLAEDSEEEMDFLSDRCV
ANGSRNTTSPSATVVPESDEEGSSPAPSVPGPSLPLDLGSDTDEEQGQQPAVGGSSSAAR
NGIQLVQAQPAEQKFKDPKVTSGAGSGAALAGPVVEKSPTPGEDSDTDMEEERIPVTPPV
VPGKKKQQQQRVLLGVGTKDPGAPEAAQLQDSPAGSDTDVEEGKVSLAVPQERNHTSMVI
DSDTDEEDEVSAAFTLAHLKERGITLWSRDPGLEEVKSQPQVLVERSQSASGRDSDTDME
EGKREVVPDSPMDLEEAPTVTHSESQPPHRPGDVDEDVDMSSPGGRLEGNQASSATVDNN
GAQEEEEIPTEPAVTLGEKHQLPPEEDWETAVEEGSSSAVADVRKSQQPVAEDTGTESAA
AGSEQESTLEVGAQSRPPATPVEQVMVCTGTPGGPTQPEREEAQTPTGTEKGAQMDRTQN
AKGCCDESEDLCLPATQCFVKRESQSSEAVQSLEDEPTQVFSCILPQEPGPSHVSLQTPG
PGALDVPWEVLATQPFCLREPEASEPRLIATHLKAEGSSPSPTSAPPGHQHLVPKEHLGL
EGREIQTVEKAMGIPKETADRVTSEREPLERTPNSGREDVIEEEELTQGQEDREPRKVLA
RDRQGQESGKVKGRDREGSGESSKVETEMSKDTQKREREVGNPEPESEWEPAGLEVTLDR
RSTEGGSHDQTEQIADLGMGDLELASALVVSGSRGDGGKGDPVSPGRQQRGHLSFEMASA
EKASKGDPEPPAHCLLSSVPEASAPPQSLLTSQSQKQSTPQPLFLMSSPSEIQLPGTLHT
KPNVRPRRSSRMTPSPHSSAAPRPASRTTRGRANRSSTRTPEPTVPTDSELQPPTSTAQP
VIPKPPSQGTQGSTNSSFVNTPEPVVLTGPEIQPPTSTEQPVNPNSTPRATRSRPSRSSI
RTPEPLIPIGSELQPLTSTEQPVIPKPTSPATRGRPRKSSVRTPEPVVPTGHELQPPTST
EQPVTPNLTSQSSRGRPRKSSVRTPEPIVPTGPELQPPTSTEQSVTPEPSSQGRTHRSSV
RTPEASIPTTSELQSFTSREQPAHKPTALSTRGRRCKASNEGSESVGPVAPDFGPPISKD
HLVTPEVTGQSMTLKSSPLSAPPGSTTPKLQPPVPTAQPVPLEPIPQASHRRRRKAAGKQ
GSRTVPIGHEPYSAPSEPESQSSTGQGSGALETAESITITPEPAVPQVPETPTHSPLMQN
EAAGRPGPIPKPPPEASRVRKKPSTTTDSPVQKRSRRQVPQKTTEPKEEDLVETQVKEES
QERAIPTPDKRKRHRAEDETQGNPSRSRRAKPNQEAAAPKVLFTGVVDSRGERAVLALGG
SLASSVNEASHLVTDRIRRTVKFLCALGKGIPILSLNWLYQSRKAGCFLPPDDYLVTDPE
QEKNFSFSLRDALSRARERRLLEGYEIHVTPGVQPPPPQMGEIISCCGGTILPSMPHSYK
PHRVVITCTEDLPRCAVPSRLGLPLLSSEFLLTGVLKQEATPEAFVLSNLEMSST
NT seq 5028 nt   +upstreamnt  +downstreamnt
atggaaaacacccaggttattaactgggatgctgacgaagaggaggagacagaagtatcc
agtgggtccttggggtatagcttggagcctatagggcggctacgtctcttcagtagtgct
catggaccagaaagagatttcccactctaccttggcaagaatgtaattggccgaagccct
gactgctctgtggccctgccttttccgtccatctctaaacagcatgcagtgattgaaatc
tcagcttgcaacaaagctcctatcctccaggattgtgggagcctcaatggcactcagctc
ataaagccccctaaggtcctgacccctggagtaagccatcgtctgagggactgggaatta
attctgtttgcagactttccctgccaataccatcgcttggatgtccctccacctttggtc
tctcggggacttctgactatagagaagactcccagaatacagggaggatcccaaacctct
agagttttgttggctgaggattcagaggaggaaatggattttctgtcagataggtgtgtg
gcaaatggatcaaggaatacaacatccccctcagcaacagtagttccagaaagtgatgag
gaggggtcttccccagccccgagtgtccccggcccgtctctgcccttggacttgggcagt
gacacagatgaagaacaaggtcagcaaccggcagtcggggggtcctcttccgctgccagg
aatggcatccagctggtacaggctcagcctgctgagcagaagttcaaggacccaaaagtc
acgagtggagcaggtagtggagcggctctggctgggccggttgtggagaagagccccact
cctggggaggacagtgatacagatatggaggaagagaggatccctgtgaccccacctgta
gttcctgggaagaagaagcagcagcagcagcgagtcctgcttggagttggtacaaaggat
cctggagcacctgaagcggcacaactgcaggacagcccagctggtagtgacacagatgtg
gaggagggcaaggtgtcactggccgtccctcaagagagaaaccacacatccatggtgatc
gacagcgatacagatgaggaggatgaagtctccgcagcattcaccttggcccatctgaaa
gagagaggaattactttgtggagcagagacccaggcttggaagaggtcaagtcccaacca
caggtccttgtagaacgaagccagagtgcctccgggagagacagtgacactgacatggag
gagggaaagagagaggtggtccctgacagccccatggacctagaagaagctcctactgtc
acccattcagagagccagcctccccacagacctggtgatgtagatgaggatgtggatatg
agttcccctggtggccgtctagagggaaatcaggcctcctctgccacagtagacaacaat
ggtgcacaagaggaggaggaaatcccgacagagccagctgttaccctgggggagaagcac
cagctgcctccagaggaggactgggaaacagctgtggaggaaggatcatcttcagcagtg
gcagatgtaagaaagagccagcagccagtagcagaagatactgggacagagtcggctgca
gctggttctgagcaggagagcactctggaggtgggggcccaaagcaggccacctgctaca
ccggtggagcaggtgatggtgtgtacaggtactccagggggtcccacccagccagagagg
gaggaagcccagacccccacaggaacggagaaaggagcacaaatggacaggacccagaat
gccaaaggctgttgtgatgaatctgaagatctgtgccttccagctacccagtgctttgta
aaaagggagagccagagctcagaagctgtccagagtttggaagatgagcctacccaggtc
ttctcatgtattcttccccaagagcctggaccttcccatgttagtcttcagactccaggt
cctggtgccctggatgtgccttgggaagtcttggctacacagccgttttgtctgagagaa
cctgaggcctctgaaccccggctcattgccacccacctcaaagctgagggatccagtcca
tctccaactagtgcaccaccaggacaccagcatctggttcccaaggagcatttgggactt
gaaggcagagagatacagactgtggagaaagccatgggtataccaaaggaaacagcagac
agggtgacctctgagagagagccgctggaaaggacaccaaacagtgggagagaagacgtg
atagaggaagaagagctaactcaggggcaagaggacagagagcccagaaaggtgttagct
agagacagacagggacaagagtctggcaaggtgaagggtagggatcgtgaagggagtgga
gagagttcgaaggtagaaacggagatgtccaaagacacacagaagagagagagagaagta
gggaaccctgaaccagagagcgagtgggagcctgctggtttagaagtgacccttgataga
aggtcaacagagggaggaagccatgatcagacagagcagattgctgatttaggcatgggg
gaccttgaacttgcatcagccctggtagtctctgggagccggggagatggaggaaaggga
gaccctgtgagccccgggaggcagcagagaggccacttgagtttcgagatggcatctgct
gaaaaggcttccaagggtgatccagaacccccagcccattgcctgctttcttcggtgcct
gaagcttcagctccacctcaaagtctcctcacctctcagagccaaaagcaatctacacct
cagcctctgtttttgatgtcttccccttctgagatacagcttcctgggactcttcataca
aagcctaatgtcaggccacggcggtcttccaggatgactccctccccacattcctctgct
gcccctagaccagcatctcgaaccactcggggcagggcaaataggtcctccaccaggacc
ccagaaccgactgtccctacagactccgaactccagcctcccacctccacagcacagcct
gtcatccccaaacccccctctcagggcactcagggcagcacaaacagttcctttgttaac
acaccggaaccagttgttctcacaggtcccgaaatccagccacccacctccacagaacag
cctgttaacccaaattccacacctcgggctactcggagcaggccaagtaggtcttccatc
aggaccccagaaccacttattcccattggctctgaactccagcctctcacctccacagaa
caacctgtcatacctaaacccacatctccggccactcggggcaggccacgtaagtcttct
gtcaggaccccagagccagttgtccccactggccatgaactccagccacccacctccaca
gaacagcctgtcacccctaacctcacatctcagtcctctcggggcaggccacgtaagtct
tctgtcaggaccccagaaccaattgtccccactggccctgaactccagccacccacctcc
acagaacagtctgtcacccctgagccctcatctcagggcaggacacataggtcttccgtc
agaactcctgaggcaagcattcccacaacctctgaactccagtcattcacctctagagaa
cagcctgctcacaagcccacagctctgagcactcggggaaggaggtgtaaggcctccaat
gagggttctgaatcagttggaccagtagcccctgattttgggcctcccatctccaaagac
catcttgttacccctgaggtgacaggtcagagcatgacactcaagtcttcaccactaagt
gctcccccagggtccactacccctaaactccagcctcctgtccccacagcccagcctgtt
cccctggagcctattcctcaagctagtcaccgaaggaggcggaaggctgctgggaaacag
ggctcccgcacagttcccattggccacgagccttactcggcaccctctgaacctgagtcc
caatcttcaaccggccaaggctcaggggcattagaaacagctgagtcgattacaatcact
cctgagcccgctgttccccaggttccggagacccccactcacagtcctctgatgcaaaat
gaagcagctgggagaccagggcccatccccaagcccccgcctgaggcttctcgagtccgc
aagaagccttccactaccacagactcaccagttcaaaaacgttcccgaagacaagttccc
cagaagaccacagaacccaaggaagaagatcttgtggaaactcaagtgaaggaagagtct
caggagagagcaattccaacaccagacaagagaaagaggcaccgtgcagaagacgagacc
caaggaaacccaagtcgaagccggcgggctaagcctaaccaagaagcggcagcccccaag
gtactgttcacaggcgtcgtggattctcgtggggagcgtgcagtcctggctctgggaggc
agtctggccagctcagtaaatgaggcctcccacttggtcactgatcgcatccgcaggaca
gtcaagttcttgtgtgccctggggaaagggatccccatcctctccctgaactggctgtat
cagtccagaaaggcaggttgcttcttgccgccggatgactacttggtgactgatcctgaa
caagagaagaattttagcttcagccttcgggatgccctgagccgggctcgggagcgaaga
ctgctggagggctacgagatccatgtgacccctggagtgcagccacccccacctcagatg
ggagagatcatcagctgctgtggaggcacaatcctgcccagcatgccccattcctataag
cctcatcgagttgtcataacttgcactgaagaccttcctcgatgtgctgttccatctcgt
ctgggactacctctcctctcctctgagttcctcctgacgggagtgctgaagcaggaagcc
accccagaggcctttgtcctctccaatctggaaatgtcatctacctaa

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