Peromyscus leucopus (white-footed mouse): 114687138
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Entry
114687138 CDS
T07241
Name
(RefSeq) protocadherin beta-18-like isoform X1
KO
K16494
protocadherin beta
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pleu04515
]
114687138
Cell adhesion molecules [BR:
pleu04515
]
Cadherins
Protocadherins
114687138
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
114687138
NCBI-ProteinID:
XP_028717669
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Position
19:26784541..26808378
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AA seq
801 aa
AA seq
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MAARRSCFPGQRQVLFLFLFGGLCLAGSEFGRYSVAEETERGSFVANLAKDLGLGVEALA
AKRTRVISDNNKQPLLLDFHTGDLLTNEKLDREKLCGSTEPCILYFQILMDNPFQIYRAE
LRIVDINDHSPAFQDKEMILKIPESKAVGAAFRLERALDSDGGRNGIQNYTISPNPFFHI
TVHNNDEGVIYPELVLDKPLDWEEEREFSLTLTAFDGGSPPRSGTATIQILVMDINDNAP
KFSQELYQTQAPENSPVGLPVVTVSAEDVDSGVNAEVTYSFFDASEDIRATFQINPFSGV
IVLKALLDYELVKSYKLNIQAVDGGGLSARCMVLVHVLDINDNPPELIISSLVNEVVENS
PETVLAVFRINDRDSGENGKTVCYIQENLPFFLRPSVDNFYILTTEGALDRESRAEYNIT
ITVTDMGTPRLTTQHTIRVQVSDVNDNAPAFTQTSYTLFVQENNSPALHIGTISATDSDS
GSNAHITYSLLPTHDPQLALDSLISINADNGQLFALRALDYEALQTFEFHVVATDQGSPA
LSSQALVRVLVLDANDNAPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNS
WLSFQLLKATESGLFSVWAHNGEVRTSRLLSERDAPKHRLLLLVKDNGDPPRSASVTLHV
LLVDGFSQPYLPLPEVARDPAQDEDALTLYLVIALASVSSIFLLSVLLFVGVRLCRRVRA
ASLGGCSVPEGHFPGHLVDVSGAGTLSQSYQYEVCLMGGTGTNEFKFLKPIPPNLPPQFP
GKELEESSTLHNSFGLFSDHN
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcagccagaaggtcatgcttccccggacaaaggcaagtgctatttctctttctgttc
gggggactgtgtttggcaggttctgagtttggacgttattcagtagccgaggaaacagaa
aggggatcatttgtggcgaatctggcaaaggacctagggctaggggtggaagcgctagct
gcaaagagaaccagggtgatttctgataataacaaacagcctttgctcctggattttcac
accggagacttgctcacaaatgagaaactggaccgggagaagctgtgtggctccacagaa
ccctgcatactgtatttccaaattttaatggataacccctttcagatttaccgggctgag
ctgagaatcgtggatataaatgatcactcacctgcattccaggacaaagagatgatttta
aaaataccagaaagcaaagctgtaggagcagcatttcgcttagaaagagccctagactca
gatggaggacgcaatggcatccaaaactacaccatcagccccaaccccttttttcatatt
acagttcataacaacgatgaaggggtgatatatccagagctggtgctagacaaacctcta
gattgggaggaggagcgggagttcagtttaacactcacagcatttgatggcgggtctccg
cccaggtctggaacagccactatacagattctggtcatggacatcaatgataatgccccc
aagttttcccaggaactttatcaaacccaggcaccagaaaatagcccagtaggacttcct
gttgttacggtctctgcagaagatgtagactcaggagtcaatgcagaagtaacctattcg
ttttttgatgcttccgaagatattcgagcaacctttcaaatcaaccctttctccggggta
atcgtgctcaaagccttgcttgattatgagttggtaaagtcctacaagttaaatatacag
gcagttgatggtgggggcctttctgctagatgtatggttctagttcatgttttagacatc
aatgacaacccccctgaactgatcatatcatcgcttgtcaatgaagttgttgagaactct
cctgaaactgtgctggcagtttttaggattaacgacagagactccggagaaaatggaaag
acggtttgctacattcaagaaaatctgcctttctttctaagaccctctgtagacaatttt
tacatcctaacgacagaaggagctctggacagagagagcagagctgagtacaacatcacc
atcacagtcaccgacatgggcacacccaggctcacaacacagcacaccataagggtgcag
gtgtctgacgtcaacgacaacgcccccgccttcacacaaacctcctacaccctgtttgtc
caggagaacaacagccccgccctgcacataggcaccatcagtgccacagactcagattca
ggctccaatgcccacatcacctactctctgctgcccacccacgaccctcagctagccctc
gactcgctcatctccatcaacgcagacaatggacagctctttgcgctcagggcgctggac
tacgaggccctgcagaccttcgagttccacgtggtcgccacagaccaaggctctcctgcg
ctcagcagccaggcgctggtgcgagtgctggtgctggacgccaacgacaatgcgcccttc
gtgctctacccgctgcagaacgcctctgcaccctgcacagagctgctgcccagggcggca
gagccaggctacctggtcaccaaggtggtggcagtggaccgcgactctggacagaactcc
tggctgtcgtttcagctgctcaaggccacagagtccgggctgttcagcgtgtgggctcac
aatggcgaggtgcgcacctccaggctgctgagtgagcgcgatgctcccaagcacaggctg
ctgctgctggtcaaggacaatggagatcctccaaggtctgccagtgtcactctgcatgtg
ctgctggtggatggcttctctcagccctacctgcctctgccagaggtggcgcgcgaccct
gcacaggacgaggatgcgctcactctgtacctggtcattgccctggcttctgtgtcttcc
atctttctgttgtctgtgctgctgtttgtgggggtgaggctgtgcaggagggtcagagca
gcctctctgggtggctgctctgtgcctgagggacactttcctggccacctggtggatgtc
agtggggcagggaccctgtcccaaagctaccagtatgaggtgtgtctaatgggaggtact
ggcacaaatgagttcaaattcctgaagccaattccccccaatctaccaccccagttccct
ggaaaagaactcgaggaaagctctactctccacaatagttttgggttatttagtgatcat
aactga
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