Peromyscus leucopus (white-footed mouse): 114687143
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Entry
114687143 CDS
T07241
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-12-like
KO
K16494
protocadherin beta
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
114687143
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pleu04515
]
114687143
Cell adhesion molecules [BR:
pleu04515
]
Cadherins
Protocadherins
114687143
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
Cadherin_FAT4_N
Motif
Other DBs
NCBI-GeneID:
114687143
NCBI-ProteinID:
XP_037053004
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Position
19:26746486..26753187
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AA seq
801 aa
AA seq
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METAWMHNLRQRQVLIFFVLLSVSEAGTELGPYFIREEMERGSFVANLGXDLGVELAEIS
TRRARIISQENKEHLQLNVQSGDLLINEKLDREELCGSIEPCVLHFQVLMKNPLQIXQVE
LQVQDINDNSPIFLEKEMVLEIPENSPVGSVFLLESATDLDVGPNAVKNYIISQSSHFHI
TLRVNPEGRKYPELVLDKALDYEEQPQLSLILTALDGGTPPRSGTALVRVEVIDINDNSP
EFEHMFYEVKIPENSILGSLVITASAKDLDSGINGELSYGFIHASEDIRKTFSINKNSGE
IHLIGYLDFETTESYSIIIKATDRGGLFGKSTVRIQVMDVNDNSPEIAVSSFINPIPENT
PETLVMIFSIQDKDSGENSRMICSILEDLPFVLKSSIENYYHLETEGALDRESRAEYNIT
ITVTDMGTPRLTTQHTITLQVSDVNDNAPAFTQTSYTLFVQENNSPALHIGTISATDSDS
GSNAHITYSLLPTHDPQLALNSLISINADNGQLFALRALDYETLQTFEFHVGATDQGSPA
LSSQALVRVLVLDTNDNAPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNA
WLSFQLLKATEPGLFSVWAHNGEVRTSRLLSERDAPKHRLLLLVKDNGDPPRSASVTLHV
LLVDGFSQPYLPLPEVARDVAQDEDALTLYLVIALASVSSIFLLSVLLFVGVRLCRRXRA
ASLGGCSVPEGHFPGHLVDVSGTGTLSQSYQYEVCLMGGTGTNEFKFLKPIPPNLPPQFP
GKELEESPTLHNSFGLFSDHN
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggagactgcgtggatgcacaatctgaggcaaaggcaagtcctgattttctttgttttg
ctgagtgtgtctgaggcaggtaccgagctgggtccttatttcatacgggaagaaatggag
aggggctcctttgtggcaaatcttgganaagatctgggggtggagctggcagagatttcc
acccgccgggctcggatcatttcccaggaaaataaagagcatttgcagctcaatgttcag
tctggagatttgctcataaacgagaaattagatagagaggagctgtgtggctccattgaa
ccttgtgttttacacttccaagtgttaatgaaaaaccccttacagattntgcaagttgag
cttcaggtccaggatataaatgacaactcccccatattcttggaaaaggaaatggttcta
gaaatcccagagaatagccctgttggttctgtgttcttactagaaagtgcgacggattta
gatgtaggacccaatgctgtgaaaaactacatcataagccagagctctcatttccacatt
acattgagagttaatcctgagggcaggaaatacccagagttagttttggacaaggcactg
gactacgaggagcagccacagctcagtctcatcctcactgctttggatggcgggactcca
cccaggtctgggactgccttggttcgggtggaagtcatagatattaatgacaactccccc
gagtttgagcacatgttctatgaagtgaagattccagagaatagcatccttggctcactg
gttatcactgcatcagctaaggatttagactcaggaattaatggtgaactatcatatggc
tttatccatgcatcagaggatattagaaaaacattttcaattaacaaaaactctggagaa
atacatttaataggatatttggactttgaaacaactgaatcctactcaataatcattaaa
gctacagatcggggaggactttttgggaaatctacagtaagaattcaggtgatggatgtg
aatgacaattctcctgaaattgctgtgtcatcatttatcaatccaatcccagaaaacacc
ccagagactttagttatgatttttagtatccaagacaaggactcaggagagaacagcagg
atgatctgttctattctggaggacctcccatttgtgctaaaatcttcgattgaaaattac
taccacttagaaactgagggagcactggatagagagagcagagctgagtacaacatcacc
atcacagtcaccgacatgggcacacccaggctcacaacacagcacaccataacactgcag
gtgtctgatgttaacgacaatgcccctgccttcacccaaacctcctacaccctgtttgtc
caggagaacaacagccctgccctgcacataggcaccatcagtgccacagactcagactca
ggctccaatgcccacatcacttactctctgctgcccacccatgacccgcagctggccctc
aactcgctcatctccatcaatgctgacaacgggcagctgttcgcgctcagggcgctcgac
tatgagaccctgcagactttcgagttccacgtgggcgccacagaccaaggctctcctgcg
ctcagcagccaggcgctggtgcgagtgctggtgctggacaccaacgacaatgcgcccttc
gtgctctacccgctgcagaacgcctctgcaccctgcacagagctgctgcccagggcggca
gagccaggctacctggtcaccaaggtggtggcagtggaccgcgactctggacagaatgcc
tggctgtcattccagctgctcaaggccacggagcctgggctgttcagcgtgtgggctcac
aatggcgaggtgcgcacctccaggctgctgagtgagcgcgatgctcccaagcacaggctg
ctgctgctggtcaaggacaatggagatcctccaaggtctgccagtgtcactctgcatgtg
ctgctggtggatggcttctctcagccctacctgcctctgccagaggtggcgcgcgatgta
gcacaggacgaggatgcgctcactctgtacctggtcattgccttggcttctgtgtcttcc
atcttcctgttgtctgtgctgctgtttgtgggggtgaggctgtgcaggaggnncagggcg
gcctctctgggtggctgctctgtgcctgagggacactttcctggtcacctggtggatgtc
agcggcactgggaccctgtcccagagctaccagtatgaggtgtgtctgatgggaggtact
ggtacaaatgagttcaaattcctgaagccaattccccccaatctaccaccccagttccct
ggaaaagaactcgaggaaagccctactctccacaatagttttgggttatttagtgaccat
aactga
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