Peromyscus leucopus (white-footed mouse): 114687816
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Entry
114687816 CDS
T07241
Symbol
Fmr1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X2
KO
K15516
fragile X mental retardation protein
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114687816 (Fmr1)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114687816 (Fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
114687816 (Fmr1)
mRNA cycle factors
Stress granule specific factors
114687816 (Fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_9
FXMRP1_C_core
Tudor_FRX1
FXMR_C2
KH_1
Agenet
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
114687816
NCBI-ProteinID:
XP_028718280
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Position
X:130104980..130146772
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AA seq
603 aa
AA seq
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MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPDRQIPFHDVRFPPPVGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLEVPEDLRQMCAKESAHKDFKKAVGAFSVTYEPENYQLVILSINEVTSKR
AHMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMPPNSLPSNNSRVGPNSSEEKKHLDTKE
NSTHFSQPNSTKVQRVLVVSSVVAGEPQKPEPKAWQGMVPFVFVGTKDSIANATVLLDYH
LNYLKEVDQLRLERLQIDEQLRQIGASSRPPPNRTDKEKGYVTDDGQGMGRGSRPYRNRG
HGRRGPGYTSESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRGQGGRGRGGAFKG
NDDHSRTDNRPRNPRETKGRTTDGSLQNASSESNRLRTGKDRNQKKEKPDSMDGQQPLVN
GVP
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaagtgcggggctccaatggcgctttctacaaggcatttgta
aaagatgttcatgaagattctataacagttgcatttgaaaacaactggcagccggacaga
cagattccattccatgatgtgagattcccaccacctgtaggttataataaagacataaat
gaaagtgatgaagttgaggtttattccagagcaaatgaaaaagagccttgctgttggtgg
ttagctaaagtgaggatgataaagggtgagttttatgtgatagaatatgcagcatgtgat
gctacatataatgaaattgtcacaattgagcgactacgatctgttaatcccaacaaacct
gctacaaaagatactttccataagatcaaactggaggtgccagaagatttacgacaaatg
tgtgccaaagaatcagcacataaggattttaagaaggcagttggtgccttctctgtaaca
tatgaaccagaaaattatcagctggtcattttgtccatcaatgaagtcacctcaaagcga
gcacacatgttgattgacatgcactttcgaagtctgcgcactaagctgtctcttatactg
agaaatgaagaagccagtaagcaactggagagttcaaggcagcttgcctcaagatttcat
gaacagtttatcgtaagagaagatctgatgggtctagctattggtactcatggtgctaat
attcagcaagctagaaaagtacctggggtcactgctattgatttagatgaggatacctgc
acatttcatatttatggagaggatcaagatgcagtgaaaaaggctagaagctttctggaa
tttgctgaagatgttatacaagttccacgtaacttagtaggcaaagtaataggaaaaaat
ggaaaactaattcaagagattgtggacaagtcaggagttgtgagggtgaggattgaggct
gaaaatgagaaaaatgtcccacaagaagaggaaattatgccaccaaattccctaccttcc
aataattcaagggttggacctaattcctctgaagaaaagaaacatttagatacaaaggaa
aacagcacccatttttctcaacctaacagtacaaaagtccagagggtgttagtggtttca
tcagttgtagcaggggaaccccagaaacctgaacccaaggcttggcagggtatggtacca
tttgtttttgtgggaacaaaagacagcatcgctaatgccactgttcttttggattatcac
ttgaactatttaaaggaagtagaccagttgcgtttggagagattacaaattgatgagcag
ttgcgacaaattggagctagttctagaccaccaccaaatcgtacagataaggaaaaaggc
tatgtgactgatgatggtcaaggaatgggtcgaggtagtagaccttacagaaataggggg
cacggcagacgcggtcctggatatacttcagaatctgaccacagagatgaactcagtgat
tggtcattagctccaacagaggaagagagggagagctttctgcgcagaggagacggacga
cggcgtggaggaggaggaagaggacaaggaggaagaggaagaggaggagccttcaaagga
aacgacgatcattcccgaacagataatcgtccacgtaatccaagagagacgaaaggaaga
acaactgatggatccctgcagaatgcctccagtgaaagtaaccggctgcgcacgggtaaa
gatcgtaaccagaagaaagaaaagccagacagcatggatggacagcaaccactcgtgaat
ggagtaccctaa
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