Peromyscus leucopus (white-footed mouse): 114688216
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Entry
114688216 CDS
T07241
Symbol
Pex1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
114688216 (Pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114688216 (Pex1)
Membrane trafficking [BR:
pleu04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
114688216 (Pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
nSTAND3
AAA_14
AAA_22
RuvB_N
TIP49
AAA_33
AAA_5
Sigma54_activ_2
ABC_tran
RNA_helicase
AAA_28
AAA_18
IstB_IS21
AAA_29
NPHP3_N
Sigma54_activat
DUF815
Mg_chelatase
AAA_19
AAA_7
Bac_DnaA
NACHT
AAA_2
T2SSE
CoaE
ORC-CDC6-like
DUF87
ABC_ATPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
114688216
NCBI-ProteinID:
XP_028718664
LinkDB
All DBs
Position
3:23456324..23498770
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AA seq
1286 aa
AA seq
DB search
MWSSDHLAGAGSGGAVVTVAFTNARDCFLHLPRQLVAQLHLLQNQAIEVTWDRQPTYLSW
VEGRHFSDRGENVAEINRQVGQKLGLSNGEQVFLRPCSHVVSCQQVEVEPLSADDWEILE
LHAISLEQHLLDQIRIVFPKAVVPIWVDQQTYIFIQIVALMPAAPYGRLETNTELLIQPK
TRQAKDNTFPKAGDARGQFHSYGQEQKEVSKELETRQLLMNPEAVAGSNETDPRVPSDSA
WRPYWWTVLGSMFSFRPDNKQETSWGSLEISAFKTMQSQAVPLEGVFRVSRVQPPSAQGM
SATSVLHKHGTIHVFPWDQEYFDVEPSFTVTYGKLVKVCSPKQQQGKTKQSVLSPEKEKH
RSESPDQKQIGSDHAEEAGRACVLKVVWNGLEELKNATKFTRSIEPLHLGKVWIPDDLRK
RLNIELHAVVRITPLETIPKIPRSLKLQPRENLPADVREEDVKTVFSSWLQQCATTTLPL
VVSEEECIQLGIKDGLKEFSLSIVHSQEKEKEKGKTVFVLSAILLQKISVQVLLEPMIRE
ENSEEIDFLLPFLKLNSLGGVNSLGTSAMEHITHSLLGRPLSRQLTSLLAGLRNGALLIT
GGKGSGKSTLAKAICKEACDVLDAHVEIVDCKALRGKRLESIQKALELAFSEAAWRQPSV
ILLDDLDLLAGPPTAPGQEHSPEAVQSQRLAHALNDIIKEFVSMGSLIALIATSQFQHSL
HPSLVSAQGIHTFQCVQNIHPPNQEQRFEILYNVVKNKLGCGINKSPDFDLQCIAKETQG
FAARDLTVLVDRAIHSHLSHHHVSTREELTLTTSDFQKALHGFLPASLRNVNLHKPRDLG
WDKIGGLHDVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARES
GMNFISVKGPELLSKYIGASEQAVRDVFMRAQAAKPCILFFDEFESIAPRRGHDNTGVTD
RVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILN
ALSDSLPLADDVDLQHVASVTESFTGADLKALLYNAQLEALQGRLLLPGGLHDGGSSSDS
DLSLSSMVFLNHSSGSDDSAGDGEWGLDQSLVSLEMSEILPDESKFNMYRLYFGSSYESE
LGNGTSSDLSSQCPSAPSSVTQDLPAPPGKDPPFTQHPVFRTPSQEGYQDLTQEQRDQLR
AEISVIKGRYRSQSGEDESLNQPGPIKTSFAISQAHLMTALAHTRPSISEEEGKDFAELY
ENFQNPKKKKNQSGTVFRPGQRVTLA
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcagcgatcacttagcgggtgcggggtctggcggggcggtcgtgacggtggcc
ttcacgaacgctcgggactgcttcctccacctgccgcggcagctcgtggcccagctgcac
ctgctgcagaatcaagctatagaagtcacctgggatcgccagcctacctacttgagctgg
gtggaaggcagacattttagtgatcgaggtgaaaatgtggctgaaattaatagacaagtt
ggtcagaaacttggactttccaacggggagcaggtgtttctcaggccatgttcccatgtg
gtgtcttgccaacaagttgaggtggaacccctgtcagcagatgactgggagatcctggag
ttgcatgccatttctctggaacagcatcttctggatcagattcgaatagtttttcctaaa
gccgttgttcccatctgggttgaccagcagacttacatatttatccaaattgttgctctg
atgccagctgccccttacggacggctagaaactaacaccgagctcctcattcagccaaag
acacgccaggccaaagacaacacatttcccaaagcaggcgatgcacgcggacaatttcat
agttatggacaagaacaaaaagaagtgtcaaaagaattggaaaccaggcagcttctcatg
aacccggaggccgtcgctgggtctaatgaaacagacccacgcgttcccagtgactcagcg
tggagaccatactggtggactgtgctaggaagcatgttttctttccggcctgacaacaaa
caagagacatcctggggatcactggaaatcagtgctttcaaaaccatgcagtcccaggct
gttcctctagagggcgttttcagagtaagccgagttcagcctcctagtgcgcagggcatg
tccgctacctctgtgcttcacaaacacggcaccattcatgtgtttccatgggaccaagaa
tattttgatgtggagcccagctttactgtgacctatggaaaactggttaaggtctgttct
ccaaaacaacagcaaggcaaaacaaagcagagtgtcctgtcgcctgaaaaagagaagcac
cggtcagagtcgccagatcagaaacagattggctcagaccacgctgaggaagctggcagg
gcctgtgtgttgaaggtagtctggaatggacttgaggagttgaagaatgccacaaagttc
accagaagtatagaacccctccaccttgggaaagtctggatcccagatgacctgagaaag
agactaaatatagagctgcatgcagtagtcaggataactccactggaaaccatccctaag
atcccaagatctctgaaattacaacctagagagaacttacctgcagatgtgagggaagaa
gatgtaaagaccgtgttctcgtcatggctacagcagtgtgcgaccaccacgctgcctttg
gtagtctcagaggaagaatgtattcagctgggaattaaagatgggttgaaagagttctct
ctgagtatagttcattctcaggaaaaagaaaaggaaaaaggaaagactgtctttgtgttg
agtgccattctgctgcagaagatctcagtacaagtccttctagagcctatgataagagaa
gaaaacagtgaggaaattgactttcttcttccctttttaaagctgaactctctgggcgga
gtgaattccttaggtacatccgccatggagcatatcactcacagcctgctaggacgccct
ttgtctcggcagctgacgtccctcctggcaggacttaggaacggtgcccttttgatcacc
ggaggaaaggggagtgggaagtcaaccttagccaaagccatctgtaaggaagcctgtgac
gtactggatgcccatgtggagatagtcgactgtaaagctttacgaggaaaaaggcttgaa
agcatacagaaagccctggagctggctttctcagaggcagcctggaggcagccatctgtc
attctgctggacgacctggacctccttgccggcccgcccactgccccaggacaggagcac
agccctgaagctgtgcagagccagcgcctcgcacacgctttgaacgatataatcaaagag
ttcgtttctatgggaagtttgatcgcgctcatcgccacgagccaattccagcattccctc
catccctcgcttgtttctgctcaaggaatccacacatttcagtgtgtccagaacattcac
cctcctaatcaggaacaaagatttgagattctgtataacgtcgtgaaaaataaactgggc
tgcggtataaacaagtcccctgactttgacctgcagtgcatagctaaggaaacccaaggg
tttgcggctagagacttgactgtcctcgtggacagagccatacactctcacctctctcat
caccacgtctccaccagggaagaattgactttaacaacatcagacttccaaaaggctctc
catgggtttcttcctgcttctctgagaaatgtcaacctgcataaacctagagacctgggc
tgggacaagattggtggattacatgatgttcggcagatactcatggatactatccagtta
ccagccaagtacccggaattatttgcgaacttgcccatacgacagaggactggaatattg
ctctatggtcccccggggacagggaaaacgttacttgctggggtggtcgcaagagagagc
gggatgaattttatcagtgtcaagggaccagagttactcagcaaatatattggagcaagt
gaacaagctgttcgagatgttttcatgagagcacaggctgcaaagccctgcattctgttc
tttgatgagtttgaatccattgctcctcgaagaggtcacgacaacacaggggttacagac
cgggtggttaaccagctgctgacacagttagatggagtggaaggcttgcagggtgtctat
gtgctggctgctactagtcgccctgacttgattgatcctgccctgttgcggcctggccga
ctggataaatgtgtatactgccctcctccagaccaggtgtcgcgtcttgagattttaaac
gccctcagtgactctctacccctggcagatgacgtggaccttcagcacgtggcgtcagta
accgagtccttcacaggagcggatctgaaagccctgctgtataacgcgcagctggaggcc
ttgcagggccggctgctgctgcccggaggactccatgatggaggctccagctctgacagt
gacctaagcctgtcttcaatggtctttcttaaccacagtagtggttccgacgactcagct
ggggatggagaatggggcttagatcagtcccttgtttctcttgagatgtctgagatcctt
ccagatgaatcaaaattcaacatgtaccggctctactttggaagctcatatgaatcagaa
cttggaaatggaacctcttctgacttgagctcacagtgtccctccgcaccaagctccgtg
actcaggatctacctgcacctcctggaaaagacccaccatttacacagcatcctgtgttc
aggacaccttcccaagaaggctaccaagacctcactcaggagcagagagaccagctgagg
gcagagatcagtgtcatcaaaggcagataccggagccaaagtggagaggatgaatccctt
aaccagccaggaccaatcaaaaccagctttgctattagccaggctcatttaatgactgcg
cttgcccacacaagaccgtccatcagtgaagaagaagggaaggattttgctgagctgtat
gaaaactttcaaaacccaaagaagaagaaaaatcaaagtggaacagtgttccgacctgga
cagagagtaactttagcatag
DBGET
integrated database retrieval system
