Peromyscus leucopus (white-footed mouse): 114688364
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Entry
114688364 CDS
T07241
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04151
PI3K-Akt signaling pathway
pleu04510
Focal adhesion
pleu04512
ECM-receptor interaction
pleu04974
Protein digestion and absorption
pleu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
114688364
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114688364
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114688364
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
114688364
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
114688364
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pleu00536
]
114688364
Glycosaminoglycan binding proteins [BR:
pleu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114688364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
114688364
NCBI-ProteinID:
XP_028718790
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Position
22:1797207..1800649
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AA seq
718 aa
AA seq
DB search
MSATCGDRGLLGRGGARPPHLPRCVTPDLSSAWALVCFGGRREVSRRRRGELHTHGHPPA
SAPQGRGTAAPAGAAPPPAEFRVLGSRARGSRGGRRWPGLPRPAQLSPPVWAGAGRSAPG
APGRGLTPPLAAPCSPAGPDSATRPRPGPRRTPLRPAKPRGLGSPRFRTDPAPLPDLGRP
GRGWGDRVRPHCPGGRGGAWKPEEGGSTRSLGLAPPPGERPAPCRREGPGDPGPASSSQR
GTQPRASVYPPGVREPRAPGPGPRVPRRPQPRPPRPQVSVRRRCPADSAAGSEQSRGVAP
PPRDSNAGLWGASFPGRLKARIALPPGPARSGATRLESHGHGARGGGGPGDARPGSRGSR
RPRPRSRRTCSSSSGTGWRENAGRTPPGPGGPRLEFPTRESDTRPGPPVGEPGEGVGGGR
GEEARVRRVGSEGGVRVCGDRGWVDLPPPWRLCGESARARVRILPAPAAPGPGAPSRPLL
GKGAWPHPEVKERPGTGADSPCPVHARGRAGEGSTLSPEFKSRTEAGLQVPAGPRHPGFD
PVPHTVEEATAGRRGGVDPGRWGERRPGAGASLSPAEGENTPPAGPPFPRVLHPVRCMSG
IQTANGWGGARRCHGAGCGRRIALSPGGAWAARKAPGQPHRQSAQWASWGLREACVRDAA
AGEQPWSQPDSGKASLGCPGHGPLHSGLQSQLQPAGGVWEPGLVSGVPRGGGWSLSPK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccacctgtggggaccgcgggctgctggggcgggggggggcccgacctccccac
ctcccccgatgtgtgacccccgacctctctagcgcctgggctttggtttgctttgggggg
cgcagggaggtctcgcgccgccgccgaggtgagctgcacactcatggccatcctcctgcc
tccgctccccagggacgaggcaccgctgccccggcgggtgctgcccccccccccgcggaa
ttccgagttctcggctccagggcgcggggctcccggggagggcgcaggtggccgggcctg
ccccgacccgcccagctgtccccgccggtgtgggccggtgcgggccggtctgcccccggg
gctcccggccgcgggttaaccccaccgctggccgccccctgcagccccgcaggcccggac
tccgcgacccgccctcggccaggccctcggcgaactcctcttcggcccgcaaagccccgg
ggcctcggctctccccgcttccgcacggatcccgcccccctccccgacttggggcgcccg
ggccggggctggggtgaccgagtccgtccccactgccccgggggacggggcggcgcttgg
aaacccgaggagggcggttcaacccgctcgctcggcctcgccccgcccccaggtgagcgc
cccgccccctgcagacgggagggcccgggggacccgggccccgcctccagctcgcagcgg
gggacccagccccgggcctcagtttaccctcccggggtgcgcgagccccgcgccccaggg
ccgggtccccgggtccccaggcggccgcagccccgcccgccgcgcccccaggtctccgtg
cgcaggaggtgcccggcggacagcgcggccgggagcgaacaaagccggggggtcgcgccg
ccgccgcgggactcgaacgcggggctctggggggccagtttccccggccgtttgaaagcc
cggatcgcactgccacccggtcccgcgcgctccggggctactcgcctggaatctcacggc
catggtgcccgggggggcggggggcctggagacgcccggcccgggtcacgagggtcgcgc
aggccccggccccgctcccgccgcacctgctcttcctcctccgggacgggctggcgggaa
aacgcggggcggacgcccccgggcccgggcggcccccggctggagtttcccacccgtgaa
agcgacacgcgccccggtccgcccgtgggggagcccggcgagggcgtcgggggaggcagg
ggcgaagaggcccgcgtgcggcgggtgggttccgaaggtggggtaagagtctgcggagac
cggggctgggtcgatctcccgcccccgtggcgcctttgcggggagagcgcgagggcccga
gttcgaatcctccccgcccccgcggctccgggacccggcgccccctcccggcctctgctg
gggaagggcgcctggccccaccccgaggtcaaagagcggccgggcactggcgccgacagc
ccctgccctgtgcacgcccgaggccgggctggagaaggatccaccctcagccctgagttc
aaatccagaaccgaggccggcctgcaggtcccagcaggcccgaggcaccccgggttcgat
cccgtgccccacacggtggaggaggctacggccgggaggaggggcggggtggacccgggg
agatggggggagcgaaggcctggggcaggcgcgtcactgagccccgcggaaggcgagaac
actcccccagccgggcccccattcccgcgtgtgctgcaccccgtgcgctgcatgagtgga
attcagactgcaaacggctggggcggtgcgcgccgctgtcacggggcgggctgcggcagg
aggattgctctcagtcccggaggagcctgggctgcacggaaagctccaggccaaccccac
cgacaaagcgcacagtgggcttcctggggacttcgggaagcttgtgtccgggatgccgcg
gcgggcgagcagccctggagccagcccgactccggaaaggctagcctgggctgccctggg
cacggcccactgcactcggggctgcagagccagcttcagccagcagggggcgtgtgggag
ccagggctggtgtctggggtcccccgtgggggagggtggtccctgtccccaaagtaa
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