Peromyscus leucopus (white-footed mouse): 114688428
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Entry
114688428 CDS
T07241
Symbol
Cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114688428 (Cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114688428 (Cnot3)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114688428 (Cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114688428 (Cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
114688428
NCBI-ProteinID:
XP_028718859
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Position
1:complement(186906522..186922284)
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AA seq
753 aa
AA seq
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MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAVPPTYPSGPPPATSALSSAPGNNGASTPAAPPSALGPKASP
APSHNSGTPAPYAQAVAPPNASGPSAAQPRPPSAQPSGGGSGGGSGGSSSSSSSGTGAGA
GKQNGATSYSSVVADSPAEVALSSSGGSSASSQALGPTSGPHNPAPSTSKEPSTAAPAGA
GSVASGSGNNSGGPSLLVPLPVNPPSSPTPSFSEAKAAGPLLNGPPQFSTTPEIKAPEPL
SSLKSMAERAAISSGIEDPVPTLHLTERDIILSSTSAPPTSAQPALQLSEVNIPLSLGVC
PLGPVSLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTV
EFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFE
QGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgaa
ggcgtggagcagtttgaagatatttggcaaaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtggcatccaacgagatcaaggacaaaaggcagcttatcgaaaac
cgcaagctcattgaaacgcaaatggaacggttcaaagtcgtggaacgagagaccaaaacc
aaagcttatagcaaggagggcctgggtctggctcagaaggtggaccctgcccagaaggag
aaggaagaggttggccagtggctcacgaacaccattgacaccctaaatatgcaggtggac
cagtttgagagtgaggtggagtcactgtcggtacagacccgcaagaagaagggcgacaag
gatcagaagcaggaccggattgagggcttgaagcggcacatcgagaagcaccgctaccat
gtgcgcatgctggagaccatcctgcgcatgctggacaatgactccatcctggttgacgcc
atccgaaagatcaaggatgacgtggagtactacgttgactcgtcccaggaccccgacttt
gaagagaacgaattcctctatgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagccacatggaggatgagatcttcaaccagtccagcagc
acgcccacctcaacaacttccagctctcccatcccacccagcccagctaactgcactacg
gaaaactctgaagatgataagaagagaggccgctcgacagatagtgaagtcagccagtct
ccagccaaaaacggctccaagcctgtccacagcaaccagcacccccagtccccagctgtg
ccgcccacctacccctctggccccccacctgccacttctgccttgagctccgcccctggc
aacaatggggcctctaccccagcagcacctccaagtgccctgggccccaaggccagtccg
gctcccagccacaactcgggtactcctgccccctatgcccaggctgtggccccacccaat
gccagcgggcccagcgctgcccagccccggcctcctagtgcccagccgagcggcggggga
agcggtggtggcagcggagggagcagcagcagcagcagcagtggcacaggcgcgggggct
ggcaagcagaacggtgccaccagctacagttcggttgttgcagacagccctgcggaggtg
gctctgagcagcagtgggggcagcagtgccagcagccaggccctgggccccacttcaggc
cctcacaacccagctcccagcacctcgaaggaacccagtacggcagcaccagcgggggct
gggagtgtggcttcaggctcagggaacaattcggggggacccagcctcttggtgccactg
cctgtgaatcctcccagttctccgacacccagcttcagtgaggccaaggcagctggcccc
ctactcaatggtcccccgcagttcagcaccaccccggagataaaggcccctgaacctctg
agctctctgaaatccatggcagaacgggcagctatcagctctggtattgaggaccctgtg
ccaacgttacacctaacagagcgagacatcatcctgagcagcacatcagcaccccccacc
tcagcccagccagccctgcagctgtcagaggtgaacataccattgtcactgggcgtgtgt
cccctggggccggtgtccctcaccaaggagcagctttaccagcaagccatggaagaggcc
gcctggcaccacatgccccacccctctgactctgagcgcattcggcagtacctcccccgg
aacccttgcccgacacccccctaccaccaccagatgccacccccacactcggacacagtg
gagttctaccagcgcctgtcaactgagacactcttcttcatcttctactatctggaggga
accaaggcacagtatttggcagccaaggccctaaagaagcagtcctggcgattccacacc
aagtacatgatgtggttccagaggcacgaggagcccaagaccatcacagatgagtttgag
cagggcacctacatctactttgactacgagaagtggggccagcggaagaaggaaggcttc
acctttgagtaccgctacctggaggaccgggacctccagtga
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