Peromyscus leucopus (white-footed mouse): 114689344
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Entry
114689344 CDS
T07241
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA cleavage complex 2 protein Pcf11-like
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114689344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleu03021
]
114689344
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114689344
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114689344
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
114689344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
Pcf11_C
Pfc11_Clp1_ID
PCF11_charged
zf_PCFS4
DUF6980
SHOCT
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
114689344
NCBI-ProteinID:
XP_037057749
LinkDB
All DBs
Position
Unknown
AA seq
1075 aa
AA seq
DB search
MVTEELENQGTKPGRSNTGKRSRSRSPKSWSPTIHSPKGREKWSPKERQKSMFPTLAPTA
GKMHQSGLTQSHREERNVKKSTKQDVRDPRLLKKMREGRPQETASKHSMRSDAEPKENIE
NWQSSKSAERWKSGWEESQSFQQCDDQSKAPHLRHKESWSSTKGILSPGSPKQPHGARVD
ANLEIPKDLTLASQREFLQKTSERLASGEITQDEFLGVVHQFRQLFEDQDGGGEEQTSPF
NDGFPLKRPRYEDSDKAFVDGPASRFVGLQTNERLPALAADRPLFDGPGKPSVKRDGPAK
IICEGPNKLSPRMNGPPTAGSFLFDGSPGPMGGGGIMPFKGPKGQFGGGGPLRFQVPPGP
VGTPLWCEGTIGQGGRGGHGRGARGRPGRGRGGGSIRFEGSTRVTFQGSTGVRRFEGPGS
KPGGGLRSECPHGQTVGSLRFEGDHGPSGAAIRFDGPHGEPGGAIRFEGPLLQQAAGMRF
QGPQGQSVAGLRLEGYNQLGGNLISEGPHGQPGVGIRFEGPLVQKGGGMRFEGPEPGGGL
RIESPLGQGGPRFEGCHSLRFDGQPGQPSLLXRLDGTQGQPGPRLERTVQPGPQRFAGPP
GQQVQPRFGSVPPRFHGPQQEQASRSDIPLGLQGPQYDIHPSQRLESFNQTGPYNDPPGN
ALNVPSEGLQFQRHEQIFDTPQGPNCNGPHGPGNQNFPNALTRASGHSFDEKNLQSSQLG
NLGNLPSPMSGGDIQPSQKVVTGVAQPVAFGQGQQFLPVHPQNAGAFIQNASGGLPEAYP
DHHLSEVDVNELFSKLVKAGILKLSQPDSTATQEKEADAQHPPEEGKDQNEDQDVPDLTH
FTTEELKQRYDSVINRLYTGIQCSSCGLRFPTSQRDVYADHLDWHYRQNRSEKDVSRKVT
HRRWYCSLRAWIEFEEIADLEEGAERRCFEKVHKEVVLKSQEAAKEKEFHSVPAGPAGAL
ESCEVCQEQFEQYWDGEEEEWHLKNAIGVDGKIYHPSCYADDQNTSSFACTPSAIKTPVE
NPWNIMLNTVKNDLQEPCESPQVKEEQTDAPPACAEESVATPTDIKTEEDTVESV
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggttacagaagaattggaaaaccaggggacaaaaccagggagatcaaacactggaaag
agatcaagatcgaggtcacctaagtcttggtcaccaactatacattccccaaagggaaga
gaaaaatggtcacccaaagaaaggcagaaaagtatgtttccaactttggcccccacagct
ggaaagatgcatcagtcaggacttacacagtcacatagggaagaaagaaatgttaagaaa
agtactaagcaggatgttcgagatcccagactgctgaaaaagatgcgtgaaggtcggcct
caagaaactgcaagtaaacattctatgaggtcagatgctgagccaaaagagaatatagag
aattggcaaagctctaagtctgcagaaagatggaaatctggttgggaagaaagtcaaagc
ttccaacagtgtgatgaccagagtaaagcacctcatctaaggcataaggagagctggtca
agcactaaaggaatcttgtcacctggaagcccaaagcagccccatggagcaagggtagat
gccaatcttgagattcctaaagacttaactctggcaagccaaagagaattccttcaaaag
acgagtgaacgtttagcttccggtgaaattacacaggatgagttccttggtgttgtgcat
caatttcgacagctttttgaggatcaagatggtggaggagaggagcagacatctcccttc
aatgatggatttccacttaagcgacctagatatgaagattcagataaagcgtttgtagat
ggcccagcatcaagatttgttggcctccaaacaaatgagcggcttccagctttagctgca
gaccgaccattatttgatgggcctggtaagccatctgtgaagagagatggcccagccaag
ataatttgtgaaggacctaataaattaagccctagaatgaatggacctcctacagcaggt
tcttttctgtttgatgggtcaccaggaccaatgggaggaggaggcattatgccattcaaa
ggaccaaaaggtcagtttggaggtgggggccctttgagatttcaagttcctccaggacca
gtaggaacacctctgtggtgtgaagggacaattggtcaaggaggacgaggaggacacggt
cgaggagcacgcggtcgaccaggacgaggacgaggaggaggcagtattcgatttgaaggt
tcaactcgtgtgacttttcagggatctacaggtgttaggagatttgaaggaccagggagt
aagcctgggggtggtctgaggtctgagtgccctcatggacagactgtgggtagtcttaga
tttgagggggatcatggtccatcaggggcagcaattaggtttgatgggcctcatggtgag
ccaggtggtgctatcagatttgagggccctttgctacagcaagctgctggaatgaggttt
cagggtccccagggtcagtctgtagctggtctgagattggaaggatataatcaactaggt
gggaaccttatttctgagggaccacatggccaaccaggtgttgggatcaggtttgaagga
cctttagtacaaaaggggggtggaatgaggtttgagggtcctgaaccaggaggtggcctg
agaattgaatcacctctgggtcaaggtggtccccgatttgaaggttgtcactctctaagg
tttgatggacagccaggtcagccatcacttttgncaagattggatggaacacaaggccag
ccaggtcctagattggaaagaactgttcagccaggtccacagagatttgctgggccacct
ggacagcaggttcaaccgagatttggtagtgtacctccaagatttcatgggccacaacag
gagcaagcatcaagatctgatattcctcttggtctgcaaggtccccaatatgacattcat
ccttcacaaaggcttgaatctttcaatcagactggcccatataatgacccacctggcaat
gctttgaatgttccatctgaaggactacaattccaaaggcatgaacagatatttgataca
cctcaaggaccaaattgtaatggacctcatggccctggaaaccagaatttcccaaatgcc
cttaccagagcttcaggacactcttttgatgaaaagaatcttcagagttctcagttggga
aacttgggcaatttacctagtccgatgtcaggaggagatattcagccatctcaaaaggtt
gtgactggtgttgctcagccagtagcatttggccaaggacaacagtttttaccagttcat
ccacagaatgctggagctttcattcaaaatgcttcaggaggtcttcctgaagcatatcct
gatcatcatctcagtgaggtggatgtaaatgaattgttttcaaaactggtaaaagcagga
attctcaaattgtcacagcctgattcaactgcaacccaggaaaaggaggctgatgctcag
catccccctgaagaggggaaggatcagaatgaagatcaagatgttccagatctcactcat
tttacaactgaagaattgaaacaacgttatgacagtgtcataaaccggctgtacactggg
attcagtgttcttcttgtggactgaggtttccgacatcccagagagatgtttatgcagat
cacttggactggcattatcggcaaaatagaagtgagaaagatgttagcagaaaggtcact
catagacgttggtactgcagtttaagagcctggatagaatttgaagaaatagctgatctg
gaagaaggtgcagaacgccggtgtttcgaaaaggttcataaagaggttgtcctcaaatct
caggaggctgctaaagaaaaggagttccacagtgtccctgctggaccagctggagcactt
gagagttgtgaagtctgtcaagaacaatttgaacagtactgggatggagaggaggaagaa
tggcacttaaaaaatgctattggagtagacggaaagatttaccatccatcgtgttatgca
gatgaccaaaacacatcttcttttgcttgtacaccatctgccatcaagacgccagttgaa
aacccttggaacattatgttgaacactgtcaaaaacgatttgcaagaaccctgtgaaagt
ccccaagttaaggaagagcaaacagatgccccaccagcctgtgcagaagaaagtgtagca
acccccactgacataaaaacagaagaggacacagttgagtcagtttag
DBGET
integrated database retrieval system
