Peromyscus leucopus (white-footed mouse): 114689470
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Entry
114689470 CDS
T07241
Symbol
Thoc3
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03013
Nucleocytoplasmic transport
pleu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114689470 (Thoc3)
09122 Translation
03013 Nucleocytoplasmic transport
114689470 (Thoc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114689470 (Thoc3)
03041 Spliceosome [BR:
pleu03041
]
114689470 (Thoc3)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114689470 (Thoc3)
Spliceosome [BR:
pleu03041
]
Complex C
Other components
EJC/TREX
114689470 (Thoc3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114689470 (Thoc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
eIF2A
Beta-prop_EML
Beta-prop_Vps41
DSE1_N
Beta-prop_WDR36-Utp21_1st
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
RMC1_N
Beta-prop_HPS5
NBCH_WD40
WDR90_beta-prop_4th
Tricorn_2nd
PD40
TRM82_WD
B-prop_COPA_B_2nd
Beta-prop_ACSF4
PAC11
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
ASA1
Beta-prop_WDR41
Beta-prop_Nup120_160
Peptidase_S9_N
Beta-prop_NWD2_C
Cytochrom_D1
Beta-prop_WDR11_1st
DPPIV_N
Beta-prop_ELP1_1st
TP_0598_N
YNCE
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
114689470
NCBI-ProteinID:
XP_028719610
LinkDB
All DBs
Position
5:9637672..9648449
Genome browser
AA seq
374 aa
AA seq
DB search
MRRAAAPGPVVCSCRCAVLSEGGMAVPTSILGPPPVGQSGPGSMASWCSVSSGPSRYVLG
MQELFRGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRG
HGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIA
VGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPV
QSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHD
GKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSR
EAGTVKLFGLPNDS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgggcagcggcgccaggcccggttgtgtgtagctgccggtgcgcggtccttagt
gagggaggtatggcggtgcccacgtcgatcctggggcccccgccggtcggccaaagcggc
cccggctcgatggcgtcctggtgctctgtgagcagtggcccgtctcgctacgtgctcggg
atgcaggagctgttccgaggccacagcaagacgcgcgagttcccggcgcacagtgccaag
gtgcactcggtggcttggagctgtgacggccgtcgcttggcctcggggtccttcgacaag
actgccagtgtgttcttgctggagaaggaccggctggtcaaagaaaacaactaccgggga
catggagatagtgtggatcagctctgttggcacccaagcaaccctgatctctttgtcaca
gcatctggagataaaaccatccgcatctgggatgtgaggacaacaaagtgcattgccact
gtgaacactaaaggggagaacattaatatctgctggagtcccgatgggcagaccattgct
gtgggcaacaaggatgatgttgtgacctttattgatgccaagacacaccgttccaaagca
gaagagcagttcaagtttgaggtcaatgaaatctcctggaataacgacaataacatgttc
ttcctgaccaatggcaatggttgtatcaacattctcagctaccctgaactaaagcctgtg
cagtccatcaatgcccatccttctaactgcatttgtatcaagtttgaccccatggggaaa
tactttgccacaggaagtgcagatgctttggtcagcctctgggatgtcgatgaattagtg
tgtgtgcggtgcttttccagattggattggcctgtgaggaccctcagttttagccacgat
ggaaaaatgctggcgtcagcctccgaggatcatttcattgacatagctgaagtagagaca
ggagacaagctgtgggaggtgcagtgtgagtccccgactttcaccgtggcttggcacccc
aagcggcctctcctggcatttgcctgtgatgacaaagatggcaaatacgacagcagccgg
gaagcggggacggtgaagctgtttgggcttccgaacgactcctga
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integrated database retrieval system
