Peromyscus leucopus (white-footed mouse): 114689881
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Entry
114689881 CDS
T07241
Symbol
Sox30
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114689881 (Sox30)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114689881 (Sox30)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
114689881
NCBI-ProteinID:
XP_028720154
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Position
8b:19983140..20024780
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AA seq
778 aa
AA seq
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MERARPEPPPPMPRQPPRPTPPRPLRPAPPAQPVEAATFRAAAAERPQSPXGQAAAAIAA
VASSCGEAAAAGAQAGTRRLLQVKPEQVLLLPPPGPLLPQAPDEGAVAAAASSSASASSA
QARLLQLRPELLLLPPQSAADGGPCRPELRPMQPRTLLVKAEKQELGAGLDLSVGSRRTT
EAGPRASRAAKLDGPGKALDGRRGDEKKAKLEAEEASRDALKGGEGRNLLAIGEGVIKTE
EPDRLREDCRLSTEAASNGLXHGSKDGILAQPPGAFGPHQQDLRXPLTLHTVPPGARINF
XGPPPSELIRLSKXPLTPVPIXMQSLLEPSVKIETKDXPLTVLPSDAGIPDTPFSKDXNG
HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKE
KHREEFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVXPGLQ
NTITHPVGEAPPAIQLPTPAVQRPSPITLFQPSVSSTGPVAVPPPSLTPRPSLPPQRFTG
PSQTDVHRLPSGTSRSVKRPTPVSLESTSRIPAGASTAHARFATSPIQPPKEYAGVSSCP
RSTPIPPATPIPHSHVYQPPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPP
FGYGNFPSSMPECLGYYEDRYQKHEAIFSALNRDYPFRDYPDEHTHSEDSRSCESMDGPP
YYNSHGHSGXEYLNPMPPLDIGALENVFTAPTSAPSGVQQVNVTDSDEEEEEKVLRNL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagccgccgccgccgatgccgcgccaaccgccgcggcccacc
ccaccgcgcccgttgcgccccgctccgcccgcgcagcccgtcgaggccgccaccttccgg
gccgcggccgccgagcgtccccaatcgccgnccggccaggccgcggccgccatcgccgca
gtggcctcatcgtgcggggaggccgcggcggcgggcgcgcaggccgggacgcggcgcctg
ctgcaagtgaagccggagcaggtgctgctgctgccgccgcccgggccgctgttacctcaa
gctcccgacgagggtgcggtcgccgccgccgcctcctcttccgcctccgcctcgtccgcg
caggcgcgtctgctgcagctgaggccggagctgctgctgttgccgccccagtccgcggcc
gacggaggcccttgcaggcccgagctgcgccccatgcagccccggacgctgctcgtcaag
gccgagaagcaggagctgggggcgggcttggacctgtcggtgggatcccggaggaccacc
gaggccggccccagagcctccagggccgccaagttggatggccccgggaaggccctcgat
ggccgccgaggggatgagaagaaagccaagctggaggccgaggaagcctcgagggatgcg
ctgaaaggcggggaaggcaggaacctgctggccatcggagaaggagtcattaagaccgag
gagccagacagactcagggaggactgcaggctgagcacggaagccgcatccaatggcctg
ngccacggcagcaaggatggtatcctggcccagccgcccggtgctttcggtccgcaccag
caagacctaaggnttcctttgactctccacacggtccctcctggggcccgtatcaatttc
nnagggcctccgccttctgagctgatacggttgtccaagngtcccctgacaccagtgcct
attnaaatgcagtccttactggagccttctgtaaaaattgaaaccaaagatngtcccctc
accgtgcttccctcagacgcaggaatacctgatactcccttcagtaaggacnagaatggt
catgtgaagcgacccatgaatgcatttatggtttgggcaagaatccaccgaccagcacta
gccaaagctaacccagccgccaacaatgcagaaatcagtgtccagctcgggttagagtgg
aacaaactcagtgaagaacaaaagaaaccctattatgatgaagcacaaaagattaaagag
aagcacagagaggaatttcctggttgggtttatcagcctcgtccagggaagcgaaaacgc
ttccctctaagtgtttccaatgtattttctggtaccacacaaaatattatctctacaaat
cctacaacaatttatccatatcgctcacctacctactctgtggtanatcccggccttcag
aacaccatcactcatccagttggtgaagccccacctgctatccagctgcccacacctgca
gtccagcgcccaagccccatcacacttttccagcccagcgtctccagcactggcccggtg
gccgttccgcctccaagtctgacgccccgcccatcactcccacctcagcgctttactggg
ccttcccaaactgacgttcataggcttccttccggaaccagtcgctctgtgaagagaccc
actccagtctccctggagagcaccagcaggattccagctggtgcaagtactgcccatgcc
agatttgcaacctcgcctatccagcctcccaaggaatatgccggcgtttccagttgtccc
cgaagcactccaattcccccagctactcccattccacactcacacgtctatcagcccccg
ccccttggccatccagctacactgtttgggacgccaccacgattctcctttcatcaccct
tacttccttcctggacctcattacttcccgtcaagcacatgcccttatagtcggcctcct
tttggctatggaaattttccaagttcaatgccagaatgtcttggttactatgaagacagg
taccaaaagcacgaggctatattttcagctttaaatagagactatcctttcagagactac
ccagatgagcacacacacagtgaagattctcgaagctgtgagagcatggacgggcctcct
tactacaacagccatggccacagtgggngagagtacttgaatcccatgcctccattggac
attggagccttggagaatgtcttcacagccccaacatcagctccctctggcgtccagcaa
gtcaatgtcactgacagcgacgaggaggaagaagaaaaagtgctcaggaatttataa
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