Peromyscus leucopus (white-footed mouse): 114689910
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Entry
114689910 CDS
T07241
Symbol
Rxrg
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
KO
K08526
retinoid X receptor gamma
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03320
PPAR signaling pathway
pleu04659
Th17 cell differentiation
pleu04919
Thyroid hormone signaling pathway
pleu04920
Adipocytokine signaling pathway
pleu04928
Parathyroid hormone synthesis, secretion and action
pleu05200
Pathways in cancer
pleu05202
Transcriptional misregulation in cancer
pleu05207
Chemical carcinogenesis - receptor activation
pleu05216
Thyroid cancer
pleu05222
Small cell lung cancer
pleu05223
Non-small cell lung cancer
pleu05226
Gastric cancer
pleu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
114689910 (Rxrg)
09152 Endocrine system
04920 Adipocytokine signaling pathway
114689910 (Rxrg)
03320 PPAR signaling pathway
114689910 (Rxrg)
04919 Thyroid hormone signaling pathway
114689910 (Rxrg)
04928 Parathyroid hormone synthesis, secretion and action
114689910 (Rxrg)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
114689910 (Rxrg)
05202 Transcriptional misregulation in cancer
114689910 (Rxrg)
05207 Chemical carcinogenesis - receptor activation
114689910 (Rxrg)
09162 Cancer: specific types
05226 Gastric cancer
114689910 (Rxrg)
05216 Thyroid cancer
114689910 (Rxrg)
05222 Small cell lung cancer
114689910 (Rxrg)
05223 Non-small cell lung cancer
114689910 (Rxrg)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
114689910 (Rxrg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114689910 (Rxrg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pleu03310
]
114689910 (Rxrg)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
114689910 (Rxrg)
Nuclear receptors [BR:
pleu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
114689910 (Rxrg)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
114689910
NCBI-ProteinID:
XP_028720189
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Position
15:complement(31485515..31530430)
Genome browser
AA seq
463 aa
AA seq
DB search
MYGNYSHFMKFPTGFGGSPGHTGSTSMSPSAALPTGKPMDSHPSYTDTPVSAPRTLSAVG
TPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSSSEDIKPLPGLPG
IGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD
CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSGHEDMPVERIL
EAELAVEPKTESYGDMNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLSLEDQVI
LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaaattattcccacttcatgaagtttcccaccggctttggtggctcgcctggc
cacactggctccacctccatgagcccatcagcagccttgcccacagggaagcccatggac
agccaccccagctacacggacaccccagtgagtgccccacggacactgagtgctgtggga
acccccctcaatgccctcggttccccgtaccgagtcatcacttcggccatgggtccaccc
tcaggagcattggcagcccctccgggaatcaacctggtggccccgcccagctctcagcta
aatgtggtcaacagtgtcagcagctctgaggacatcaagcccttaccaggtctgcctggg
attggaaacatgaactacccatccaccagtcccggttccctggtgaaacacatctgtgcc
atctgtggggacagatcctcaggaaagcattacggtgtgtacagctgtgagggctgcaaa
ggcttcttcaaaagaaccataaggaaagacctcatctacacctgtcgcgataacaaagac
tgcctcatcgacaagcgccagcgcaaccgctgccagtactgccgctaccagaagtgcctg
gtcatgggcatgaagagggaagctgtgcaagaagaaaggcagaggagccgggagcgagct
gagagtgaggcagagtgtgccagcagtggccacgaagatatgcccgtggagaggattcta
gaagccgaacttgctgtggaaccaaagacagaatcctacggtgacatgaacatggagaac
tcgacaaatgaccccgttaccaatatatgccatgctgccgacaagcaacttttcaccctt
gttgagtgggccaaacgcatcccccacttctcagacctcagtttagaggaccaggtcatt
ctgctccgggcagggtggaatgaattgctgatcgcctccttctcccaccgctcggtttct
gtccaagatggcatcctgctggccacaggcctccatgtccacaggagcagtgctcacagt
gccggtgttggctccatctttgacagagtcctcacagagctggtttccaagatgaaagac
atgcagatggacaagtcggagctggggtgcctgcgagccattgtgcttttcaacccagat
gccaagggtttgtccaacccctctgaggtagagactcttcgagagaaggtttatgctacg
ctcgaggcctacaccaagcagaagtatccggaacaaccaggcaggtttgccaagctgctg
ctgcgcctcccagctctgcgctccattggcttgaaatgcctggagcacctcttcttcttc
aagctcattggggacacccccattgacaccttcctcatggagatgttggagaccccactg
cagatcacctga
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