Peromyscus leucopus (white-footed mouse): 114690140
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Entry
114690140 CDS
T07241
Symbol
Trpa1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
114690140 (Trpa1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pleu04040
]
114690140 (Trpa1)
Ion channels [BR:
pleu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114690140 (Trpa1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
ANK_LRRK2
Acetate_kinase
SchA_CurD
Motif
Other DBs
NCBI-GeneID:
114690140
NCBI-ProteinID:
XP_028720481
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Position
5:complement(143756960..143802273)
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AA seq
1124 aa
AA seq
DB search
MRCSLRRMLRPEERKEIQGVVYRGVEEDMDCSKESFKVDIEGDMYRLEDFIKNRRKLSKY
EDESISPLHHAAAEGQIELMKMIIHGSSCEVLNTMDNCGNTPLHWAAEKNQVESVKFLLS
QGANPNLRNSNMMAPLHIAVQATYNEMTKVLIEHTTTNINLEGENGNTALMSACAKDNSE
ALQLLLEKGAKLCKSNKWGDYPVHQAAFAGAKKCMQLVLNYGEKHGFTKESHINFVNHKK
ASPLHLAVQSGDLDMIKMCLDNGAHIDMIENGKCMALHFAATQGATDIVKLMISSYTGSS
DIVNAVDGNQETLLHRASLFDHHDLADYLISVGADINSTDSEGRSPLILATASASWNIVN
LLLSKGAKVDIKDHLGRNFLHLTVQQPYGLKNLRPEFMQMQHIKELVMDEDNDGCTPLHY
ACRQGVPVSVNNLLGFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGD
LHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNLK
CTDRLDEEGNTALHFAAREGHAKAVAMLLNYNADIVLNKQQASFLHIALHNKRKEVVLTT
IRSKRWDECLHVFSHYSPSNRCPTMEMVEYLPECMKVLLDFCMIPSTEDKSCQDYHIEYN
FKYLQCPLEMTKKMTPTQDVRYEPLTVLNVMVQHNRIELLNHPVCKEYLLMKWCAYGFRA
HMMNLGSYCLGLIPMTFLVVKIKPGMAFNSTGIINETSNNLDPVNTLNSFPITICMVLVF
LSSIFGYCKEVVQIFQQKRNYFLDYNNALEWIIYTTSIIFVLPLFLNIPAYMQWQCGAIA
IFLYWMNFLLYLQRFENCGIFIVMLEVIFKTLLRSTGVFIFLLLAFGLSFYVLLNFQDAF
STPLLSLIQTFSMMLGDINYRDAFLEPFLRKELAYPILTFGQLIAFTMSVPIVLMNLLIG
LAVGDIAEVQKHASLKRIAMQVELHTNLEKKLPLWYLRKVDQKSTIVYPNRPRHGRMLRF
FHYFLCTQETRQEVPNTDMCLEMEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETE
DEDNHCSFQDRFKRERLEHMHSKWNFVLNAVKTKPHLNISHPDL
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcagcctgaggaggatgctgcgcccggaggagaggaaggagatccagggcgtt
gtctatcgcggcgtggaggaagacatggactgctccaaggaatcctttaaggtggacatt
gaaggagatatgtatagattagaagacttcatcaagaaccgaagaaaactaagcaaatat
gaggatgaaagtatctcccctttgcatcatgcagcagcagaaggtcagattgaactaatg
aagatgatcatccatggttcttcttgtgaagtgctgaatacaatggataattgtggaaat
accccactgcactgggctgcagaaaaaaaccaagttgaaagtgtgaagtttcttcttagc
caaggagcaaatccaaaccttcgaaacagcaacatgatggcaccccttcacatagctgta
caggccacgtacaatgaaatgaccaaggtcttgattgagcacaccaccaccaacatcaat
ttagaaggagaaaatggaaacacagctctgatgtccgcatgtgccaaagacaacagtgaa
gctttgcagcttttgttagaaaaaggagcgaagctgtgtaaatcaaataaatggggagac
taccctgttcaccaggctgcatttgcaggtgccaagaaatgcatgcaattagtactaaac
tatggtgaaaagcacggcttcaccaaggagtctcatattaactttgtgaatcataagaaa
gctagcccactccacctggcagttcaaagtggtgacttggacatgatcaaaatgtgcctg
gacaatggtgcgcacatcgacatgatagagaatggcaaatgcatggccctccattttgct
gcaacccagggagccactgacattgttaaactcatgatctcatcctatactggaagcagt
gatattgtgaatgcagttgatggcaatcaggagaccctgcttcacagagcctcattgttt
gaccaccatgacctggcagactacttaatttcagtgggagcagacatcaacagtactgat
tctgaaggacgctctccacttattttagcaactgcttctgcatcttggaatattgtgaat
ttgctcctctccaaaggtgccaaagtagacataaaagatcatctggggcgtaacttttta
catttgactgtacaacagccttatggactaaaaaatttgcggccggagtttatgcagatg
caacatatcaaagagctcgtgatggatgaagacaatgatggatgtacgcctctccactat
gcgtgtaggcagggagtcccagtctctgtaaataacctccttgggttcaatgtgtccatt
cattccaaaagcaaagataagaaatcacccctgcattttgcagccagctatggacgcatc
aatacatgtcagaggcttctacaagacataagtgacacgaggcttttgaatgaaggggat
ctccatggaatgacccctcttcacctggcagcaaagaatggacatgataaagttgttcaa
cttcttctgaagaaaggggcattgtttctcagtgaccacaatggctggacggctttgcat
catgcatccatgggcgggtacactcagaccatgaaggtcattcttgatactaacttgaag
tgtactgatcgactagatgaagaagggaacacagcgctccactttgcagcgcgggagggc
cacgccaaggctgttgctatgcttctgaactacaacgctgacatcgtcctgaacaagcag
caagcctcctttctgcacatcgcactgcacaacaagcggaaggaagtggtcctcacaacc
atcaggagcaagagatgggatgagtgtcttcacgttttcagtcattattctccaagcaac
agatgtccaaccatggaaatggtagaataccttcctgagtgcatgaaagttcttttagac
ttctgcatgatcccttccacagaggacaagtcctgtcaagactaccacattgaatataat
ttcaaatatcttcagtgcccactagaaatgaccaaaaaaatgacacctacccaggatgtg
agatatgagcctctgacagtcctcaatgtcatggtacaacataaccgcatagagcttctc
aaccaccctgtgtgtaaggaatacttacttatgaaatggtgtgcttatggtttcagagcc
catatgatgaacctagggtcttattgtcttggtctcattcccatgacctttcttgttgtc
aaaataaagcctggaatggccttcaactccactggaatcatcaatgaaactagtaataat
ttggatccagtaaacactctgaattcatttccaataacaatatgtatggttcttgttttc
ttatcaagtatatttggatattgcaaagaagtggtccaaattttccaacagaaaagaaat
tacttcctggattacaacaatgctctggaatggattatctatacaaccagcatcatcttt
gtattacccttgtttctcaacatcccagcatatatgcagtggcaatgtggagcaatagca
atattcttatactggatgaactttctattatatcttcagaggtttgagaactgtggaatt
ttcattgttatgttggaggtgatttttaaaacattgttgagatcaacgggcgtgtttatc
ttcctcctattggcttttggcctcagcttttatgtcctcctgaacttccaagatgccttc
agcactccattgctctccttaatccagactttcagcatgatgctaggagacatcaactat
cgagatgccttcctagaaccattcctaagaaaggaattggcatatccaattctgaccttt
gggcaacttattgccttcacaatgtctgtcccaattgttctcatgaatttactaattggt
ttggcagttggggacattgccgaggtccagaagcatgcatcactgaagaggattgctatg
caggtggaacttcataccaacttagagaaaaagttgcctctctggtacttacgcaaagta
gatcagaagtccaccattgtgtatccaaacagacccaggcatggcaggatgctgcgattt
tttcattactttctttgtacccaagaaacacggcaagaagtaccaaacactgacatgtgt
ttggaaatggaaatattgaaacagaaatacagattgaaggacctcacttctctcttggaa
aagcagcatgaactcatcaaactcattatccagaagatggaaatcatctcagagacagaa
gatgaagataaccattgttctttccaggacagatttaagagggagaggctggagcacatg
cacagcaaatggaattttgtgttgaatgcagttaagacaaaaccacacctaaacattagt
cacccagacctttag
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