Peromyscus leucopus (white-footed mouse): 114690196
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Entry
114690196 CDS
T07241
Symbol
Lmo7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
114690196 (Lmo7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pleu04121
]
114690196 (Lmo7)
Ubiquitin system [BR:
pleu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114690196 (Lmo7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
LIM
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
114690196
NCBI-ProteinID:
XP_028720615
LinkDB
All DBs
Position
9:complement(22390738..22610368)
Genome browser
AA seq
1805 aa
AA seq
DB search
MEGMEDAEADCSVAFAEAQRWVEAVTEKTFETKDFRASLENGVLLCDLINKLKPGIIKKI
NRLSTPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVKQEETDRRLKNVLIT
LYWLGRKAQNSPYYNGPHLNLKAFETLLGQALTKALEDSSCLKRSGRDSGYGDIWCPDRG
EFLAPPGRHRREDSFESLDSLGSRSLTSCSSDLTLRGGKEGFESDTDWEFTFKMQDYNKD
DMSYRRISAIEPKSALPFNRFLPNKSKQPSYVPAPLRKKRPDKNEDNRRSWASPVYTETD
GTFSSNQRRTWGPKMERWHTIQETSTSSCYLEEEEEKITRIPNLVKDDLYVRKLSPVMPS
PGGSFDQFLPKCWTPEDMNWKKIKRETYKPWYKEFQGFRRNSDSEDEDSGSLRSATIFSR
LEKAEHRLASSYQRPSLLLELATKHAMRSRDTPAARRTSGPLEESSQFLLLQALQTYSDD
ILSSETSVKIDPTSGPRLITRRKNPSHTPGYRADDLELPALDPDLENDDFFVRKTGAFHA
NPCVLRAFQDLRRFSEPDDAVERDIILQCREGELVLPDLEKDDMIVRRIPAQKKEVPLSG
APDRYQPVPFPEPWTLPPEIQAKFLCVLERTRPPKEKSSGCRVLAPSYRQKRDDMLARKI
QSWKLGTAVPPISFKPGPCSEADLQKWEAIREASRLRHRKRLMVERLFQKIYGENGSKSM
SDVSAEDAQNLRQLQYEEMQKIKSQLKEQDQKWQDDLAKWKSRRKSYTSDLQKKKEEREE
IEKQALERSDRSSKTFREMLQDRESRNQNSTRRMYSSDDALDEVLTPTATLSETSYQTER
LEVKATIYPAETPKEDSTTFANRQDSVAAEIQLPSHIPEEQLPATLSAAEPHQTPLSSAE
PHQASLPSAELHQASLPSAEPHQVSLSSVAQRPVSLSLQQSPSTRAESTRISASLPRSYQ
KADTARLTSVVTARPFGTQSRGISSLPRSYTMDAGWKYNGDAEVVKGPQQNSVKASAPKL
DSIQFVWGSSSEREAATGEDVASMSSPIPTSSSPSQDQVATSKATLSSTSGLDSVSDSGE
GRSSPLREVSRTQDQFSDMRISINQTPGNKPDFGFTIKWDFSGIFVASVEKGSPAEFSQL
QVDDEILAINNTKFSYKDTKKWEETMANAQETGNLVMDVRRYGKSDWGRDQPPLPSIRHK
TLNLTSVATKIIGSPETKWTDTTSGIYNTDKSSSLSVTTDFSESLQSPYTESKEINGIHE
ESNTFDSKASESISLRNLKRRSQFFEQGSADSVAPDLPVPTLSAPSRWAWDQEEERKRQE
RWQKEQDRLLQEKYQREQEKLREEWRRAQQEAERENSKYLDEELMVLNSNSISLSTREPV
ASTWEPTWSEGSKSSDREGTRAGEEERGQLEEDAVYEDQRRKLQEQLTLEQEKKRKEQEA
QEEELRKQREAEAQAQAQAEAEAKARAEAQAQAEAEAKARAVAQAQAEAQAERRAETQKH
QAERERETSVKIYQYRRPIDSYDIPKREEDSSGLLPSDRSKSRSTTELNNAPTEKNGSSK
YSDRIGTTSFSQRSSKKDQAPSEAELERQQILQEMRKRTSLHNDNSWIRQRSASVNKEPI
CLPGIMRRGESLDNLDSQRPSSWRQSPWHNQPAGVYASSSVQDFSRPPPQLLSTSNRAYM
RNPSSAVPPPAGPVKAVIPGPAPPGSPTPRSHSPSMSQSGSQLRNRSVSGKRVCSYCNNI
LGKGAAMIIESLGLCYHLHCFKCVSCECDLGGPSSSSGAEVRIRNHQLYCNDCYLRFKSG
RPTAM
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atggaagggatggaggacgccgaggccgattgctccgttgcattcgcagaggctcagaga
tgggtggaggctgtaactgagaagacttttgaaacaaaggattttcgagcctctctagaa
aatggtgttctgttgtgtgatttgattaataagctcaaacctggcatcataaagaagatt
aatagactgtctacaccaatagcaggtttggataatataaatgtttttttgaaagcttgt
gaacagattggattgaaagaagcccagctttttcatcccggggatctacaggatttatca
aatcgagtcactgtcaagcaagaagagactgacaggagactgaaaaatgttttgataact
ttgtactggctgggaagaaaagcacaaaacagcccctactataatggtccccatctcaat
ctgaaagcttttgagactctgttaggacaagcgttgactaaggcacttgaagattccagc
tgtctgaaaagaagtggccgagacagtggctacggtgatatctggtgtcctgacagagga
gaatttcttgcccctccaggtcgccataggagggaggattcctttgaaagcttggactcc
ttggggtctaggtcactgaccagctgctcttcagatctcacacttagaggtgggaaggaa
ggttttgaaagtgacacagattgggaatttacattcaaaatgcaggattataacaaagat
gatatgtcctatcgaaggatttcagctattgaaccaaagtctgctctaccattcaaccgc
ttcttgcctaacaaaagtaaacagccatcctatgtgccagcacctctgaggaagaaaaga
ccagacaaaaatgaggataacagaagaagctgggccagcccggtctacacagaaacagat
ggaacattttcaagtaaccagaggaggacttggggtcccaagatggagcgctggcacaca
atccaagaaacttcaacctcctcttgttatctggaagaggaggaagaaaagataacgcgc
atccccaaccttgtgaaggatgatctctatgtgcgaaagctcagccctgtcatgccaagc
ccagggggctcttttgatcagtttcttcccaaatgctggaccccagaagatatgaactgg
aaaaaaataaagagagagacttataagccatggtataaggaattccagggattcagaagg
aattctgactctgaggacgaggactcaggctctctcagaagcgccacgatttttagtagg
ctagaaaaggcagagcataggttagccagcagctaccaaagaccttcactcttgctggag
ctagctaccaaacatgccatgaggtcacgggacacccctgcagccaggcggaccagtggt
cctttggaggagtccagtcagtttttattgcttcaggctcttcaaacatactctgatgac
atcttgtcttcagaaacaagcgtcaaaatcgatcccacctctggcccaaggctcataact
cgcagaaaaaatccctctcacacaccaggctatcgagcggatgaccttgagctgccagct
ctggatcctgacttagaaaatgatgatttctttgtcagaaaaactggggctttccatgca
aatccatgtgttctccgagccttccaagaccttcgaaggttctctgagccagacgatgct
gttgagcgagatataattttgcagtgtcgggaaggcgaacttgtacttccagatttagaa
aaagatgatatgattgttcgccggatcccagcacagaagaaagaagtgcccctgtctggg
gcccctgatagatatcagccagtccctttccctgaaccctggaccctacctccagaaatc
caagcgaaatttctgtgtgtgctcgaaaggacacgcccacccaaagaaaaaagcagcggc
tgtagagtcttagctccttcctatcgacagaagagagatgacatgttggctcgcaagatc
cagtcttggaagctggggaccgctgtgcctcccatcagcttcaagcctggcccctgcagc
gaggccgacctgcagaagtgggaggccatccgggaggccagcagacttaggcacaggaag
cggctgatggttgagagactctttcaaaagatttatggtgagaatgggagcaagtccatg
agcgatgtcagcgcggaggatgctcagaacctgcgtcagctgcagtacgaggagatgcag
aaaataaaatcccaactgaaagaacaagatcagaagtggcaggatgaccttgcaaaatgg
aaaagtcgtcggaagagttacacttcagatctgcagaagaaaaaggaggagagggaagag
attgaaaagcaggcactcgagaggtctgaccgaagctccaagacatttagggaaatgctg
caggacagggaatctcgaaatcagaattctacaaggaggatgtattcctctgatgacgcc
ctggatgaagtgctcactcctacagcgactctctcagaaaccagctaccagaccgagaga
ctggaagtcaaggcaacaatttatcctgccgagacgcccaaagaagattccacaactttt
gcaaatagacaggacagtgtagccgctgagattcaacttccttctcatattcctgaagag
cagctgccggccactttatctgcggcagaaccacaccagacccccttgtcttctgcagaa
ccacaccaggcatccttgccttctgcagaactgcaccaggcatccttgccttctgcagaa
ccacaccaggtctccttatcttcagtagcacagcgtccagtctcgctctctttacagcag
tcgccgagtacaagagcagagtcgactcggatttcagcttctctccctagaagttaccag
aaagccgatacagccaggttaacatctgtggtcacagcgagaccttttggcacgcagtca
aggggaatctcatcactgcccagatcctacacgatggatgctggctggaagtacaatgga
gatgctgaagttgtcaagggacctcaacagaattcggtcaaagccagtgccccgaagctt
gactccatccagtttgtttggggctcatccagtgaaagggaggcagccacaggagaagat
gtggcaagcatgtcctcccccatacccacttcttcatctccatcccaagaccaggtagct
acttcaaaagccacactctcttcaacgtctggcctggattcagtgtctgactctggagaa
gggagaagctcaccactgagggaggtttcaaggacccaggatcagttcagcgacatgaga
atcagcataaaccagacgcctgggaacaaacctgactttggctttacaataaaatgggat
ttttctgggatcttcgtagcatcagttgaaaaaggtagcccagcagaattttctcagctg
caggtagatgatgaaattcttgccatcaacaacaccaagttttcatataaggacacgaaa
aagtgggaggaaaccatggcaaatgcccaagaaactggaaacttggtgatggatgtcagg
cgctatggaaagtctgactggggcagagaccaacctcccctgccatctatacggcataaa
accctcaatcttaccagtgtggctaccaaaattataggttcacctgaaaccaagtggact
gatacgacttcagggatttacaacacggacaagtcttcaagtctgtcggtaacaactgat
ttctctgaaagccttcagagtccttatactgaatccaaagaaatcaatggaattcatgag
gaaagcaacacctttgattcaaaagcatcagaatccatttctttgagaaatttaaaaagg
cgatcacagttttttgaacaagggagcgccgattctgtggctcctgatcttccggttcca
accctcagtgccccgagtcgctgggcatgggatcaagaggaggagaggaaacggcaggag
aggtggcagaaagaacaggaccgcctacttcaggaaaaataccagcgtgagcaagagaag
ctgagggaagagtggcggagggcccagcaggaggcggagagagagaattccaagtacttg
gatgaggagctgatggttctaaactccaacagcatttctctgagcacacgggagcctgtg
gcttccacctgggaacccacttggagtgaagggtccaagtcttcggacagggaaggaacc
cgagcaggagaggaggagaggggacagctggaagaggatgctgtttatgaggaccaacgt
cggaagctgcaggaacagctcacgcttgagcaggagaagaaacggaaggaacaagaagct
caggaagaagaacttcggaagcagcgggaggctgaggctcaggcccaggcccaggccgag
gcagaagctaaggcccgcgcagaggcccaggcccaggctgaggcagaagctaaggcccgc
gcagtggcccaggcccaggccgaggctcaggcagaaagacgagctgaaacacagaagcac
caggcagagagggagagagaaacttcggtgaagatctaccagtaccggaggcctattgat
tcctatgatatacccaagagagaagaggactcttcagggctgcttcctagtgacaggagt
aaatcaagatccactacggaactgaacaatgcccctacagagaagaatggaagcagcaag
tattcggaccgaattgggactactagcttttcacaaaggagctccaagaaggatcaggcc
ccctcagaagcagagttggagagacagcaaatccttcaggaaatgaggaagagaacatct
ctgcataatgacaacagctggatccgacagcgcagtgccagtgtaaacaaagagcccatc
tgcctgcctgggatcatgagaagaggggagtctctggacaatctggactcccagcggccc
agttcttggaggcagtccccatggcacaaccagcctgcaggggtctatgcctcctcctct
gtccaagacttcagccgcccgcctccacagctgttgtccacatcaaaccgtgcctacatg
cggaacccatcctctgctgtaccgcctccagcgggcccagtgaaggccgtcatcccaggc
cctgcccccccagggtctcccactccacgcagccattccccttcaatgtcacagtcaggc
tcccagctccgtaacaggtcagtgagtgggaagcgtgtgtgctcctactgtaataacatt
ctgggcaaaggagctgctatgatcatcgagtccctgggtctttgttatcatttacattgt
tttaagtgtgtctcctgtgaatgtgacctcggaggcccctcctcctcctcaggagccgaa
gtcagaatccgaaaccaccaactgtactgcaatgactgctatctccgattcaaatctgga
cggccaaccgccatgtga
DBGET
integrated database retrieval system
