Peromyscus leucopus (white-footed mouse): 114690377
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Entry
114690377 CDS
T07241
Symbol
Myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
114690377 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114690377 (Myo5c)
04131 Membrane trafficking [BR:
pleu04131
]
114690377 (Myo5c)
03029 Mitochondrial biogenesis [BR:
pleu03029
]
114690377 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pleu04812
]
114690377 (Myo5c)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
114690377 (Myo5c)
mRNA cycle factors
P-body specific factors
114690377 (Myo5c)
Membrane trafficking [BR:
pleu04131
]
Others
Actin-binding proteins
Myosins
114690377 (Myo5c)
Mitochondrial biogenesis [BR:
pleu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
114690377 (Myo5c)
Cytoskeleton proteins [BR:
pleu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
114690377 (Myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
NPHP3_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
114690377
NCBI-ProteinID:
XP_028720970
LinkDB
All DBs
Position
14:complement(88786111..88862378)
Genome browser
AA seq
1737 aa
AA seq
DB search
MAVAELYAQYNRVWIPDPEEVWKSAEIAKDYRAGDRVLRLLLEDGTELDYPVDPGLLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQILGANMRTY
LLEKSRVVFQSENERNYHIFYQLCACAQQSELKHLKLGSAEEFNYTRMGGSTVIEGVNDR
DDMLETRKTFTLLGFKEDFQMDVFKILAAILHLGNVQVTTMGNERSSVSEDDRHLMVFCE
LLGLETSKVAQWLCNRKIVTASETVVKPMTRPQAINARDALAKKIYAHLFDFIVERINQA
LDFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNALFEKPR
MSNTSFVIQHFADKVEYQCEGFLEKNRDTVYDMLVETLRASKFHLCATFFQENPVPSSPF
GAMITVKSAKQVIKPNSKHFRTTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDGKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYLEFYSRYGILMTQQELSLSDKKEVCKAA
LHRFIQDSNQYQFGRTKIFFRAGQVAYLEKLRLDKLRQGCIVIQKHVRGWLQRRKFLRER
QAALTIQQYFRGQQTVRKAITATALKEAWAAIILQKHCRGYLVRNLYQLIRVATITIQAH
TRGFLARRQYRKLLQEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QSRENHGLVEKLTSLAALRAGDLEKVQKLEAELERAATHRLSYEEKGRRYRDTVEERLSK
LQKHNAELELQKEQAELTLQEKTEELKEKMDKLTRQLFDDVQKEEQQRLFLEKSFELKTQ
AYEKQIESLREEIKALKDEKTQLHHQLEEGRVTTDSLKGEVARLSKQAKTISEFEKEIEL
LQAQKIDVEKHVQSQKREMRERMSEVTKQLLESYDIEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKDCYEKEIEGLNFKVVHLSQEINHLQKLFREETGINESIRHE
VTRLTSENMMIPDFKQQISELERQKQDLESRLKEQTEKMEGKLEEPFGHPNQAREEEGTQ
AKAVAAPGKERLRDKIPELQEASEFLKKQPEAEGEVRCILHQEASSGLSLENRDLEEELD
MKDRMIKRLQDQVKTLTKTIEKANNVHPPSGPKEYLGMLEYKKEDEAKIIQNLILDLKPR
GVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSAISGIKHVVKEHFEDLEMLSFWL
SNTCHFLNCLKQYSGEEEFMKYNSPQQNKNCLNNFDLTEYRQILSDVAIRIYHQFIVVME
NNIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSVLQQLSYFYSTMCQN
GLDPELVRQAVKQLFYLIGAVTLNSLLLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQNS
TAKETLEPLSQAAWLLQVKKTTESDAKEISECCTSLSAVQIIKILNSYTPIDDFEKRVAP
SFVRKVQALLNNRGDSSQLMLDTKYLFQVTFPFTASPHALEMTQIPSSFKLGFLRRL
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctctacgcgcagtacaacagggtttggatccctgatcctgaagaa
gtttggaagtcggctgaaattgccaaggactacagagctggtgaccgagtcctccgactc
ctgctggaggatggaacggaactggattaccctgttgacccagggttgctgcctccactc
cggaacccggacatccttgtgggtgagaatgacctcaccgccctcagctacctccatgag
ccggcagtgctgcataacctcagaatccgctttgcagagtccaaactcatctacacctac
agtggaatcatcttggtggccatgaatccttacaaacagctgccgatatacggggatgcc
atcatccatgcctacagtggacagaacatgggtgacatggacccacacatctttgcagtc
gcagaggaggcctacaagcagatggccaggaacaatagaaatcaatccataatcgtgagt
ggggagtcaggagctgggaagactgtttctgcacgctacgccatgaggtactttgccact
gtcagcaaatccagcagcaacgcccacgtggaggacaaagtcctggcatccaatcccatt
actgaggctgttggaaatgccaagacaaccagaaacgacaatagcagtcggtttgggaaa
tacacagaaatcagctttgacgagagaaatcagatccttggcgccaatatgagaacctac
ctcctggagaagtccagagtggtctttcagtcagaaaacgagcggaactaccacatcttc
tatcagctgtgtgcatgcgcacagcagtcagaattgaaacacctgaaactagggagcgct
gaagagttcaactacacgagaatgggaggtagcactgtcattgaaggtgtaaatgacagg
gatgacatgctggagactcgaaagaccttcacactactgggtttcaaggaagattttcag
atggatgttttcaagatcctcgctgctatcctacatctgggtaatgtgcaggtcaccacc
atgggcaacgagaggtcttcagtcagtgaggacgacaggcacctgatggtgttctgtgag
ctcttgggcctggagacgagcaaagtggcccagtggctgtgcaatagaaaaattgtgacc
gcctcggagacggtggtcaagcccatgaccaggcctcaggccatcaatgccagggatgca
ctggccaaaaagatctacgctcacctgttcgacttcattgtagagagaatcaaccaggca
ctggacttctcaggcaagcagcacacttttattggtgttttggacatttatggttttgag
acctttgatgtcaacagctttgaacagttctgcatcaattatgctaacgaaaagctgcag
cagcagtttaacctgcacgtctttaaacttgagcaagaagaatacatgaaggaagacatc
ccttggactctgatagacttctatgacaatcaacctgttattgacctgattgaagcaaaa
atgggcattttggagttgctggacgaagaatgcttgttgcctcatggaactgatgaaaac
tggcttcagaagctgtacaacaattttgtcaacaagaatgctctattcgaaaagcctaga
atgtccaacacatcctttgtcatccagcacttcgctgacaaggtggagtaccagtgtgaa
gggttcctggagaagaacagagacactgtctatgacatgctggttgaaaccctcagagca
agcaagtttcacctctgcgccaccttttttcaagaaaaccctgttccgtcttctcccttt
ggggcaatgatcacagttaaatctgcaaagcaggtcatcaaaccaaacagcaagcacttc
cggaccacagtaggcagcaagttccgcagctccctgtacttgctcatggaaactctcaat
gccaccacaccccactacgtcaggtgcatcaagcccaatgacgggaagctgccctttgag
tttgactccaaacgaattgtccagcagctgcgagcctgtggcgttttagaaaccatccgc
atcagtgcccagagctacccttccaggtggacatacctcgagttctacagccgctatggc
atcctcatgacccagcaggagctgtccctcagtgataagaaggaggtgtgcaaggcggct
ttgcacagattcatccaggattctaaccagtaccaatttggtagaaccaagattttcttc
agagcaggacaggtggcttatttagagaaactccgcttagataaactgaggcagggttgt
attgtgattcaaaagcatgtgcggggctggctgcagagaaggaagttcctccgagagaga
caagctgccctgacaatccagcagtacttccggggtcagcaaacagtgaggaaggccatc
actgccaccgctttgaaggaggcctgggcagccatcatcctccagaagcattgccgaggg
tacctggtccgcaacctgtaccagctgatccgtgtggccaccatcaccatccaggcccac
accaggggcttcctggccaggaggcagtaccggaagttgctgcaggagcacaaggccgtg
atccttcagaagtacgcgagggcatggctggcccggcgtagattccagaacatccgcaga
tttgtgctcaacattcagctgacttacagggtccagcgtttgcagaagaagctggaggac
cagagcagagagaaccacggactggtggagaagctgaccagcctggccgcgctgcgggct
ggcgacctggagaaggttcagaagctggaagccgagctggaaagggcagccacccaccga
ctcagctacgaagagaagggcaggagatacagggacacggtggaggagaggttgtcaaag
ctgcagaaacacaatgcagagctggagttgcagaaagagcaggcagagctgacgctgcag
gagaagaccgaggagctgaaagaaaaaatggacaagctcaccaggcagctgttcgatgac
gtgcaaaaagaggaacagcagagactatttcttgaaaagagttttgagctgaaaacgcaa
gcctatgagaaacagatagagtctctgagagaagaaattaaagccctcaaggacgagaag
acgcagctccatcatcaactggaggagggacgggtcaccactgacagcctgaagggggag
gtggcccgcctgagcaagcaggcaaagaccatctctgagtttgagaaggagatagagctg
ctgcaggcgcagaagatagacgtggaaaaacacgtgcagtcacagaaacgagagatgaga
gaacggatgtcagaggtcaccaaacagcttctggagagctatgacattgaagatgtcaga
agcaggctctctgtggaagatctggaacacttaaatgaggacggagaactttggtttgcc
tatgaaggactaaagaaagcaactcgcgttctggagagtcatttccagtctcagaaggac
tgctatgaaaaagagattgaaggcctgaacttcaaggtcgtgcatctgagccaggaaatc
aaccacctgcagaagctgttcagagaggagacgggcatcaatgaaagcatccgtcacgaa
gtcaccaggctgacatcagagaacatgatgatcccagacttcaagcagcagatttcagag
ctggagaggcagaagcaggatcttgaatcccgcctgaaggagcagacggagaagatggaa
ggaaaactggaagagccgtttggtcacccaaaccaagcccgagaagaggaaggaacgcag
gccaaggcggtggcggctccaggaaaagagaggctgagggacaagatcccagaactgcag
gaggccagtgagttcctgaagaagcaaccagaagctgaaggggaagtcaggtgtatcctc
caccaagaggcgtcatccgggctgtctttggaaaacagggaccttgaggaagagttagac
atgaaggacagaatgattaaaaggctacaggatcaagtcaagactttgaccaagacgatt
gaaaaagccaacaatgtgcacccgccctcaggacccaaggagtacctcgggatgctggaa
tacaagaaagaagatgaggccaagatcatccaaaacctcattcttgacctgaagccccga
ggcgtggtggtcaacatgatccccgggctgccagctcacatcctgttcatgtgtgtgcgg
tacgcggactccctgaacgatgccaacatgctcaagtccctcatgaacagtgccattagc
ggcatcaagcacgtggttaaggaacattttgaagatttggagatgctctccttctggctg
tccaacacttgccatttcctcaactgcctgaagcaatacagcggagaagaggaattcatg
aagtataacagcccacagcagaataagaactgcttgaacaattttgatcttacagaatac
agacaaattctgagtgatgtggctattcggatttatcaccagttcatcgtggtaatggaa
aacaacatccagccaataatagtgccaggcatgctggagtacgagagtctgcagggcatt
tccggcctgaagcccactggtttccggaagcgctcatccagcatcgatgacacagatgcc
tacaccatgacgtctgtcctgcagcagctgagctacttctacagtaccatgtgtcagaac
ggcctggaccccgagctcgtgaggcaggcggtgaaacagctgttctacctgattggggcg
gtgaccctcaacagcctcctcctgcggaaggacatgtgctcctgcaggaaagggatgcag
atcaggtgcaacatcagctacttagaagaatggcttaaagataagaatttgcagaacagc
acagccaaggagacgctggagcccctctcccaggcagcctggttgctccaggtcaagaag
accacggagagtgacgccaaggagatctctgaatgctgcacctccctgtctgctgtgcag
atcataaagatccttaattcgtacacacctatagatgacttcgagaaaagagttgctccg
tcctttgttcgcaaagtacaggctcttctgaataaccggggtgactcatcccagctgatg
ctggacaccaagtacctttttcaagtgacatttcctttcaccgcctcgccgcacgccctg
gagatgacccagatccccagcagcttcaagctcggctttctccggagactgtag
DBGET
integrated database retrieval system
