Peromyscus leucopus (white-footed mouse): 114690412
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Entry
114690412 CDS
T07241
Symbol
Smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03082
ATP-dependent chromatin remodeling
pleu04714
Thermogenesis
pleu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114690412 (Smarcd2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
114690412 (Smarcd2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
114690412 (Smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleu03021
]
114690412 (Smarcd2)
03036 Chromosome and associated proteins [BR:
pleu03036
]
114690412 (Smarcd2)
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114690412 (Smarcd2)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114690412 (Smarcd2)
PBAF complex
114690412 (Smarcd2)
GBAF(ncBAF) complex
114690412 (Smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
114690412
NCBI-ProteinID:
XP_028721021
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All DBs
Position
8b:86143969..86154136
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AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPNPALRGPGPSGGLGVPGAAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKADGDNAGAAGTPGGTPAADKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgttgcccccgctgagccccggcggcggcgcc
gttgccgcggcccttggtgcgccgcctccgcccgcgggacccggaatgctgcccaacccg
gcgctcagaggccccgggccttctggaggattgggggtcccgggggccgccgccttccgc
cccatgggccccgcgggccccgcggcgcagtaccagcgacctggcatgtcaccaggaagc
aggatgcccatggctggcttgcaggtgggacctccagctggctccccatttggcacagct
gctccgcttcgacctggcatgccacctactatgatggatccattccgaaaacgcctgctt
gtgcctcaggcccagccccccatgcctgcccagcgccgagggttaaagaggaggaagatg
gcagataaggttctacctcagcgaatccgggagcttgtcccagagtctcaggcatacatg
gatctcttagcttttgagaggaagctggaccagaccatcgctcgcaagcggatggagatc
caagaggctatcaaaaagcctctgacgcaaaagcgcaaacttcggatctatatttccaat
acattcagccccagcaaggcagatggtgataatgcaggagctgcagggacccccggggga
accccagcggcagacaaggtggcttcctgggaacttcgagtggaaggaaaacttctggat
gatcctagcaaacagaagaggaagttttcatctttctttaagagccttgtcattgagctg
gacaaggaactgtatgggcctgacaaccatctggtggagtggcatcggatgcccaccacc
caagaaacagatggctttcaggtgaaacgaccaggagatctcaatgtcaagtgcaccctc
ctgctcatgctggatcatcagcctcctcagtataaactggacccccgactggcgaggctg
ctgggagtgcacacacagacgagggctgccatcatgcaggcactgtggctttacatcaaa
cacaaccagctgcaggatgggcacgagcgggagtacatcaactgcaatcgttacttccgc
cagatcttcagctgtggccgactccgtttctctgagattcccatgaagctggctggattg
ttgcagcatccagaccccattgttatcaatcacgtcattagcgtggatcccaacgaccag
aagaagacagcctgctatgacattgacgtggaggtggatgacccactcaaggcccagatg
agcaattttctggcctctaccaccaaccagcaggagattgcctctcttgatgtcaagatc
catgagactattgagtccatcaaccagctgaagacccagagggatttcatgcttagcttt
agcactgacccccaggacttcatccaggaatggctccgttcccagcgccgagacctcaag
atcatcacggatgtgattgggaatcctgaggaggagagacgagctgctttctaccaccag
ccctgggctcaggaagcagttgggaggcacatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgctgggtattcgcctgacctaa
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