Peromyscus leucopus (white-footed mouse): 114690455
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Entry
114690455 CDS
T07241
Symbol
Abca6
Name
(RefSeq) ATP-binding cassette sub-family A member 6
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
114690455 (Abca6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pleu02000
]
114690455 (Abca6)
Transporters [BR:
pleu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
114690455 (Abca6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
nSTAND1
AAA_22
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
114690455
NCBI-ProteinID:
XP_028721105
LinkDB
All DBs
Position
8b:82105165..82171927
Genome browser
AA seq
1626 aa
AA seq
DB search
MSMKEISVYQQTRALLHKNLLKKWRMKRESFLEWSIPIIIGLYMGLFSHIKVNIQVPEVP
PQDLGSLDEFNGSSIVVVYTPISNITQQIMNKTTFAPSMKGTRIIGVPSKNDLDEVLLKN
IPHALGIIFNDTFSYKLEVFLTHGNPFLKEDLLAHCWDVYDGVSCSLSRYWKRGFVPLQS
AINAAIIEITTNHSVMEDLMSVNAINMKTLPFITKGVFQYEVFILFCLLYFSSFIYFVSR
NITTERKKYKELMKIMGLQDSAFWLSWGLIYVGFIFIISILIAVIITSAQIVVMTGFLVI
FTLFFLYGLSLIAVTFLVAVLLQKAILTNLIVFLFTFLWGCVGFTVLHKQLPTSLEWILS
ICSPFAFTSGMAKIISLDYNLNGVVFPDSSGESYVMLVTFSILAFDGFIYLVLALYFDKI
LLYGDEHRHSLLFFLNSLSCFRQKTSSNKVIERGIDSELPSDDYFEPVAPEYQGKEAIRI
RNIKKEYKGKSVKVEALKGLFFDIYESQITAILGHSGAGKSSLLNILSGLYVPTAGLVTV
YNKNLSEMQDLKEIRKITGVCPQHNVQFDALTVKENLTLFAKIKGILPQNVKQEVQQIIL
ELDMQNIQDNLAEHLSEGQKRKLTFGIAILGDPRILLLDEPTVGLDPFSRQRVWSFLKER
RANRVILFSTQFMDEADILADRKVIMSNGSLKCMGSSMFLKRKWGLGYHLSLFMDETCDS
EQIASFINLHIPDAKLKAKTKEQLVYILPLERTSKFPDFFRDLDRYSGQGLMNYEVSMST
LNEVFMNLEGESTTKQNFEKRETRRDSESLNEMEPACPSLSEVQKTVSVMSRWGMQVCAI
ARLRILKLKRERKAFLTFLLILGIALFPLIMEKMAYAVIVQKTNWELKPELYFLSPGQLP
QGLRTSLLIINNTDSNIEDFIQSLKHQNIVLEVDDFENRNGTESLSYNGAIIVSGRQKDY
RFSVVCNTKRLHCFPILMNIISNGLLHMFNHSQYIRIEEAIFTSDLMIFWFGIMDGSLFL
LFVACSISPHIAMSSASDYKRKADSQLWISGLYPSAYWCGQAVVDVNIFGVILLSVYFTL
YMIHMIHIYLTSEVVLCIVVLAFGCAASLVFLTYVISFVFGKRRKNSGLWSIGFFVVVII
IFDMLLNFGFSETLLITLMTIVPSFSLTTFLIVLDMRTHQHYEEFGEIKYGLSGADYLLC
LIPYFHALLFIFVLRCLELKCGKNVIQKDPIFRISPQSLNGQLNPEERRGEDEDEDVQAE
RIRTSAALSTSNSNERPVIIANGLHKEYAGQKKNCFSKRTKKVAARNISFCVNKGEILGL
LGPNGAGKSSSIRMIAGITKPAAGEVELKGFSSAVGFHGDGTVKFGYCPQENVLWPILTV
KEHLELYAAVKGLRKEDAVIAISRLVNAFKLHDQLNVLVQKLSAGDTRKLCFVLSILGNS
SVLILDEPSTGLDVSGKQQMWQAIQAAVKDNEKGVLLTTHDLAEAEALCDRVAIMVSGRL
RCIGSIQHLKKKFGMDYILELKVNETSQVPLVHGEILKLFPQAAHQERYFSLLTYKLPIT
DVYPLSQAFHKLEAVKHSFNLEEYSLSQCTLDKVFLELSKEQELGSVHEETAATVRWKLL
PHLEEL
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgaaagaaataagtgtctatcagcaaacccgagcgcttctgcacaagaatctg
ctcaagaaatggagaatgaaaagagagagcttcttggaatggagcatcccaattattata
ggactgtatatgggtctgttttcacatatcaaagtaaatatacaagtccccgaagtccca
cctcaggatcttggaagtttagatgaatttaatggatcttctatagtggttgtatataca
ccaatctctaacataacccaacagataatgaataaaacaacttttgctccctctatgaaa
ggaacaagaatcattggggtcccaagtaaaaatgacttggatgaagtgcttttgaagaat
attccccatgctcttggaatcatatttaatgacactttctcttacaagttagaggtattt
ctaacgcatggaaatccatttttgaaagaagacttattagctcattgctgggatgtatat
gatggtgtttcatgttcattgtccagatactggaaaagaggatttgtgcctttacaaagt
gccatcaatgctgctattatagaaatcacaacaaaccactctgtgatggaggacttgatg
tctgttaatgcaataaatatgaagacattaccttttattactaaaggtgtttttcaatat
gaagtttttattctattctgcttgctttatttctcctcattcatatattttgtatcacgt
aatattactacagagaggaaaaagtataaggaattgatgaaaataatgggtctacaagac
tcagcattctggctgtcctggggcttaatctatgttggcttcatcttcattatttctata
cttattgcagttatcataacttctgctcaaattgtagtgatgactggcttccttgtcata
tttacactctttttcttatatggattatctttgatagctgtcactttcctggtggctgtt
ttgttacagaaagctatcctcaccaatctaatcgtatttctctttaccttcctttggggg
tgtgtggggttcactgtacttcataaacaactccccacatctctggaatggattctgagc
atttgcagcccttttgccttcacctctgggatggctaagattatctccctggattataac
ttgaatggtgtagtatttcctgactcttcaggagaatcatatgtaatgctagtgacattt
tccatattggcttttgatggttttatctacttggttctggcattgtattttgacaaaatc
ttgctctatggggatgaacaccgtcattctctattgtttttcttgaattcattatcttgt
tttcgacaaaagactagtagtaacaaggtcattgagagagggatagactctgagcttcct
tcagatgattattttgagcctgtggctccagaataccaaggaaaagaagccatcagaata
agaaatattaaaaaagaatataaagggaagtctgtaaaagtggaggctttgaaaggcttg
ttctttgatatatatgaaagtcaaatcacagcaattctgggccacagtggagcaggaaaa
tcttcattactaaacatcctcagtggattatatgttccaacagcaggattagtcacagtc
tataataaaaatctctctgaaatgcaagacttgaaggaaatcagaaagataactggtgtc
tgtcctcaacataatgttcaatttgatgcactcactgtgaaggaaaacctcaccctcttt
gctaagataaaagggattcttccacagaatgtaaaacaagaggtacaacaaattatattg
gaattggacatgcaaaatattcaggataaccttgctgaacatttaagtgaaggacagaaa
agaaagctcacctttgggattgccattttaggagatcctcgaattttgcttttagatgaa
ccgactgttggactggatcccttctcaaggcagcgtgtgtggagtttcctgaaggaacgc
agggcaaatcgtgtgatcctcttcagtactcagttcatggatgaggcagacatccttgct
gacagaaaagtgatcatgtccaatgggagtctaaaatgcatgggttcttctatgtttctg
aagagaaaatggggtcttggctatcacttaagtttgtttatggatgaaacatgtgattca
gagcagatagcatccttcatcaatcttcacatccctgatgctaaactaaaagcaaaaacc
aaagaacagcttgtgtacattttgcctttggaaaggacaagcaagtttccagacttcttc
agagatcttgatagatattctggccagggcttgatgaattatgaagtttccatgtcaact
ctgaatgaagtcttcatgaatctggagggagaatcaactaccaaacaaaactttgagaaa
agagaaacaagaagagactcagaaagcttaaatgaaatggaaccagcttgtccttctctt
tctgaagtgcagaagactgtgagtgtcatgagtcgctggggaatgcaggtctgtgcaata
gcacggcttcgcatcctaaaactgaaacgagagagaaaagcatttttgacctttctattg
attcttggaattgcactgttcccattgattatggaaaagatggcttatgctgtgatagtg
caaaaaaccaactgggaacttaaaccggaattgtatttcctgtcccctggacaactccct
cagggtctgcgaacaagcctattgatcatcaacaacacagattcaaatattgaggatttc
atacagtcactgaagcatcaaaacatagttttggaagtagatgactttgaaaacagaaat
ggtactgaaagcctctcatacaacggagctattatagtttctgggagacaaaaggattac
aggttttcagttgtgtgtaataccaagaggctacactgctttcctatcctaatgaatatc
atcagcaatgggctccttcatatgttcaaccattcacagtatattagaattgaggaagct
atttttacatcagacctgatgatattctggtttgggataatggatggttccctgttcttg
ctgtttgttgcgtgcagcatttcgccacatattgccatgagtagtgccagtgattacaaa
aggaaagccgattctcagctgtggatttctggcctctacccttctgcctactggtgtggg
caggcagtggtggatgttaacatctttggcgtaattcttctctcagtctacttcacatta
tacatgatacatatgatccacatttacttgacaagtgaagttgtgctatgtatagttgtt
cttgcattcggttgtgctgcttctcttgtcttcttgacatatgtgatatcatttgttttt
ggcaaaaggagaaaaaacagtggtctctggtcaattggcttctttgttgtcgttatcatc
atatttgacatgcttttgaattttggcttcagcgaaacactgttaattaccctcatgaca
atagtgccttcattctcattgactacattcctgattgttttggatatgagaacccaccag
cactatgaagaatttggagaaatcaaatatggtttatctggggctgattatctgttgtgc
ctaataccatactttcatgctttgctgttcatttttgttctgagatgcctggaacttaaa
tgtgggaagaatgtaatacagaaagatcccattttcaggatatctccacaaagtctaaat
ggtcaactaaatccagaggaacgtagaggtgaagatgaagacgaagatgttcaagcagaa
agaataaggacatcggctgccttgagcacttcaaactcaaatgagagaccagtcataatt
gccaatggtctgcacaaagagtatgcaggacagaagaaaaattgcttttcaaagaggaca
aagaaagtagcagcaagaaacatctctttttgtgttaataaaggtgaaattttgggattg
ttaggacccaatggtgctggtaaaagttcctctattagaatgatagctgggatcacaaag
ccagcagctggagaggtggaactgaaaggatttagctcagctgtgggtttccatggtgat
ggcacagtcaagtttggatactgtccccaggagaacgtgctgtggcccatcctgacagtg
aaagagcacctggagctgtatgctgcagttaaagggctgaggaaggaagatgctgtcatc
gccatttcaagattagtgaatgcttttaaactacatgaccagctgaatgtcctggtgcag
aaactatctgcaggagacactagaaagctgtgctttgtgctgagcatcctgggaaattca
tctgtcctgattctggatgaaccctctacaggcttagatgtgtctgggaagcagcaaatg
tggcaggcaatccaggcagctgttaaagacaatgagaagggtgtcctcttgactacccat
gacctggctgaggctgaggctctgtgtgaccgagtggccatcatggtgtctggaaggctg
agatgcattggttcaatccagcacctgaaaaagaagtttggcatggattacattctagaa
ctaaaagtgaatgaaacttctcaagtgccattagtccatggggagattctgaaactgttc
ccacaggccgcacatcaggaaaggtatttctccttgttgacctacaagctacccataaca
gatgtttatcctctgtctcaggcctttcataaactagaagcagtgaagcatagctttaac
ctggaagaatacagcctctctcagtgcacactggacaaagtatttttagaactttcgaag
gaacaggagctgggaagtgttcatgaagaaactgctgcaactgtgagatggaagctcctc
cctcatttagaggaactgtaa
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