Peromyscus leucopus (white-footed mouse): 114691461
Help
Entry
114691461 CDS
T07241
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04082
Neuroactive ligand signaling
pleu04721
Synaptic vesicle cycle
pleu04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
114691461 (Slc6a4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
114691461 (Slc6a4)
04721 Synaptic vesicle cycle
114691461 (Slc6a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pleu02000
]
114691461 (Slc6a4)
Transporters [BR:
pleu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
114691461 (Slc6a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
UPF0114
Motif
Other DBs
NCBI-GeneID:
114691461
NCBI-ProteinID:
XP_028722631
LinkDB
All DBs
Position
8b:60273602..60308627
Genome browser
AA seq
631 aa
AA seq
DB search
METTPLNSQKGLSACKDREDCQENGVLQKGVPTPGDRAEPGQISNGYSAVPSMSAGDEAT
HSLPAATTTTLVAEIRQGERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLL
PYTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTI
IAWALYYLISSFTDQLPWTSCQNPWNTANCTNYFSQDNITWTLHSTSPAEEFYLRHVLQI
HLSKGLQDLGTVSWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYVVLSVLLVRG
ATLPGAWRGVVFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQ
DALVTSVVNCMTSFLSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPA
ATFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLIVVITCVLGSLL
TLTSGGAYVVTLLEEYATGPAVLTVALIEAVAVSWFYGITQFCSDVKEMLGFSPGWFWRI
CWVAISPLFLLFIICSFLMSPPQLRLFQYNYPHWSIVLGYCIGTSSIICIPTYIIYRLIS
TPGTLKERIIKSITPETPTEIPCGDIRLNAV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttgaattctcagaaagggctgtcagcgtgcaaggacagagaggac
tgtcaagaaaatggtgttctccagaagggcgtccccaccccaggggacagggcagagcct
ggtcaaatatccaatgggtactcggcagttcccagcatgagcgcaggagacgaagctaca
cactctctgccagctgccaccaccaccaccctggtggctgagattcgccaaggggaacga
gagacctggggcaagaagatggattttctcctgtctgtcattggctacgctgtggacctg
ggcaacatttggcgttttccctacatttgctatcagaatggcggaggggccttcctcctc
ccctataccatcatggccatctttggggggatcccgctcttttacatggagctcgcactg
ggccagtaccaccgaaatgggtgcatttctatatggaggaaaatctgcccgattttcaaa
gggattggctacgccatctgcatcattgccttctacatcgcctcctactacaacaccatc
attgcctgggcgctctactacctcatctcctccttcacggaccagctgccctggaccagc
tgccagaacccctggaacaccgccaactgcaccaactacttctcccaggacaacatcacc
tggacgctccattccacgtcccctgctgaggagttttacctgcgccatgtcctgcagatc
cacctgtcgaagggactccaggacctggggaccgtcagctggcagcttgctctctgtatc
atgctcatcttcaccattatctactttagcatctggaaaggagtcaaaacatctggcaag
gtggtgtgggtgacagccaccttcccttacgtcgttctgtccgtcctgctggtgagggga
gccacccttcctggagcctggagaggggtcgtcttctacttgaaacccaactggcagaaa
ctcttggagacaggggtgtgggtggatgctgctgctcagatcttcttctctcttggcccg
ggctttggggttctcctggcttttgctagctacaacaagttcaacaacaactgctaccaa
gacgccctggtgaccagtgtggtgaactgcatgaccagcttcctctcgggctttgtcatc
ttcacggtgcttggctacatggctgagatgaggaatgaggacgtgtcggaggtggccaaa
gacgcgggtcccagcctcctcttcatcacatatgccgaggctatagccaacatgccagca
gccacattctttgccatcatcttcttcctcatgctcatcactctgggtttggatagcacg
tttgcaggcctggaaggcgtgataacggcagtactggatgagtttccacacatctgggcc
aagcgtcgcgagtggtttgtgctcattgtggtcattacttgcgtcttgggatccctgctc
acactgacttctggcggcgcgtatgtggtgacgctgctggaggagtatgccaccggcccc
gccgtgctcactgtggcgctcatagaagccgttgctgtgtcttggttctatggtatcact
cagttctgcagtgacgtgaaggaaatgctcggcttcagcccaggatggttctggaggatc
tgctgggtagctatcagtcctctgtttctcctgttcatcatttgcagttttttgatgagc
ccaccccaactgcggcttttccaatataattatcctcactggagtatcgtcttgggctac
tgcatagggacgtcatctatcatctgcatccctacgtatatcatttatcggctgatcagc
actccagggacacttaaggagcgcattattaaaagtatcactcccgagacaccaacagaa
attccctgtggggacatccgcttgaatgctgtgtag
DBGET
integrated database retrieval system
