Peromyscus leucopus (white-footed mouse): 114691594
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Entry
114691594 CDS
T07241
Symbol
Scn9a
Name
(RefSeq) sodium channel protein type 9 subunit alpha
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
114691594 (Scn9a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pleu04040
]
114691594 (Scn9a)
Ion channels [BR:
pleu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
114691594 (Scn9a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Lustrin_cystein
FraC
Motif
Other DBs
NCBI-GeneID:
114691594
NCBI-ProteinID:
XP_028723220
LinkDB
All DBs
Position
4:complement(43345125..43490210)
Genome browser
AA seq
1988 aa
AA seq
DB search
MAMLPPPGPQSFVYFTKQSLALIEQRISEEKAKEHKDEKKEDDEEGPKPSSDLEAGKQLP
FIYGDIPPGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYMLSPFSPLRRISI
KILVHSLFSMLIMCTILTNCIFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFCVGE
FTFLRDPWNWLDFIVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRKELEENETLESIMDTIESEEEMK
KYFYYLEGSKDALLCGFSTDSGQCPEGYRCVKAGRNPDYGYTSFDTFSWAFLALFRLMTQ
DYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKE
LEFQQMLDRLKKEQEEAEAIAAAAAEYTSIGRSRMMGLSESSSETSRLSSKSAKERRNRR
KKKNQKKISSGEEKGDDEKLSKSESDESIKRKSCNLGVEGHHRAREKRLSTPNQSPLSIR
GSLFSARRSSRTSLFSFKGRGRDLGSETEFADDEHSIFGDNESRRGSLFVPHRPRERRSS
NISQASRSPQMLQVNGKMHSAVDCNGVVSLVDGPSALMVPNGQLLPEVIIDKATSDDSGT
TNQMRKKRLSSSYFLSEDMLNDPHLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHT
FLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKNVLAVGN
LIFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLL
RVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIN
EDCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVYMMVMVIGNLVVL
NLFLALLLSSFSSDNLTAIEEDTDANNLQIAVARIKRGINYVKQTVREFILKSFSKKPKG
SKDTKRAVDPNNKKENYISNRTLAEMSKDHIFHKEKDKMSGYGSSIDRSFMDENDYQSFI
HNPSLTVTVPIAPGESDLENMNTEELSSDSDSEYSKERRNRSSSSECSTVDNPLPGEGEE
AEAEPVNSDEPEACFTDGCVRRFPCCQVNVDSGKGKVWWTIRKTCYRIVEHSWFESFIVL
MILLSSGALAFEDIYIEKKKTIKTILEYADKIFTYIFILEMLLKWVAYGYKTYFTNAWCW
LDFLIVDVSLVTLVASTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPS
IMNVLLVCLIFWLIFSIMGVNLFAGKFYECVNMTDGERFPTTKVANRSECFALMNVSGNV
RWKNLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVNEQPKYEYSLYMYIYFVIF
IIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRP
GNKFQGCIFDLVTNQAFDITIMVLICLNMVTMMVEKEGQSDYMTDVLYWINVVFIILFTG
ECVLKLISLRHYYFTVGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRI
LRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFN
FETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPKKIHPGSPVEGDCGNPSVGIFYF
VSYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFC
KLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGEGGEMDSLR
SQMEERFMSANPSKVSYEPITTTLKRKQEDVSATIIQRAYRRYRLRQNVKNISSIYIKDG
DRDDDLPNKEDIVFDNVNENSSPEKTDATASAVSPPSYDSVTKPDQEKYETDKTEKEDKG
KDGKESGE
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgctgcctcccccaggaccacagagctttgtctactttacaaaacagtctctt
gccctcattgaacaacgcatttctgaagaaaaagccaaggaacataaagatgaaaagaaa
gaagatgatgaagaaggtcccaagcccagcagtgacttggaagctggtaaacagctgccc
ttcatctatggagacattccccctggaatggtgtcggagcccctggaggacctggaccca
tactatgcagacaagaaaacttttatagtattgaacaaagggaaagcaatcttccgtttc
aacgccacacctgctttgtacatgctgtcccccttcagtcctctaagaagaatatctatt
aagattttagtgcattccttattcagcatgctaatcatgtgcacaattctgaccaactgt
atattcatgaccatgagcaaccctccagactggaccaaaaatgtagaatacacttttact
gggatatatacttttgaatcactcataaaaatccttgcaagaggcttttgtgtgggagaa
ttcaccttcctccgtgacccttggaactggctggattttatagtcattgtttttgcgtat
ttaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagtcttgaga
gctttgaaaactatttctgttatcccaggcctgaagaccatcgtgggggccctgatccag
tcggtgaagaagctgtctgacgtcatgatcctcactgtgttctgtctcagtgtctttgca
ttaattggactccagctgttcatgggcaacctaaagcataaatgtttcaggaaggaactt
gaagagaatgaaacgttagaaagcatcatggataccattgagagtgaagaagaaatgaaa
aaatatttttattacttggagggatccaaagatgctctcctttgtggcttcagcacagat
tctggtcagtgtccagaagggtacaggtgtgtgaaggctggcagaaaccctgattacggc
tacacgagcttcgacactttcagctgggccttcctggccctgtttcggctgatgacgcaa
gactattgggagaacctttaccaacagaccctgcgcgctgctggcaaaacctacatgatt
ttctttgtcgtggtgatttttctgggctccttttacctgataaacttgatcctggctgtg
gtagccatggcgtatgaggaacagaaccaggccaacatcgaagaagctaaacagaaagaa
ttagaatttcagcagatgttagaccgactcaaaaaagagcaggaagaagctgaggcgatc
gctgccgctgccgctgagtacacaagtattggacggagcaggatgatgggtctctcggag
agttcttcagaaacctccaggctgagctcaaagagtgccaaggagagaagaaacagaaga
aagaaaaagaaccagaagaagatctctagtggcgaggaaaagggagatgacgagaaactg
tccaagtcggaatcagacgaaagcatcaaaaggaaaagctgcaatctcggggtggaaggg
caccaccgtgcccgggagaagaggctgtccactcctaaccagtcaccactcagcattcgt
ggctccttgttctcggcaaggcgcagcagcagaaccagcctcttcagttttaagggtaga
ggaagagatctaggatctgagactgaattcgctgatgacgaacatagcatttttggagac
aacgagagcagacggggttcactatttgtgcctcacagaccccgggaacggcgcagcagt
aacatcagccaggccagtaggtccccccaaatgctgcaggtgaacgggaagatgcacagt
gcggtggactgcaatggcgtggtgtcgcttgttgatggaccctcagccctcatggtcccc
aatggacagcttcttccagaggtgataatagataaggcaacttctgacgacagcggcaca
actaatcaaatgcgcaaaaaaagactctccagttcttacttcctgtcagaagacatgctg
aatgatccgcatctcaggcaaagagcaatgagcagggcaagcattctaaccaacactgta
gaagaacttgaagaatctagacaaaaatgtccaccatggtggtacagatttgctcacaca
tttttaatctggaattgctctccatattggataaaattcaaaaagttcatctattttatt
gtaatggatccttttgtagatcttgcaattaccatttgcatagttctaaacacattattt
atggctatggagcaccatccaatgactgatgaattcaaaaacgtacttgcagtggggaac
ctgatctttacagggatcttcgcagctgaaatggtactgaagttaatagccatggatccc
tatgagtatttccaagtagggtggaatatttttgacagcctaattgtgacattgagtttg
gtagagcttttcctagcagatgtagaaggattatcagtcctgcggtcattcagattgctg
cgagtcttcaagttggcaaaatcctggcccacactgaatatgctcattaagatcatcggt
aactcggtgggcgcactgggcaacctgaccttggtgttggccatcattgtcttcattttt
gccgtggttggcatgcagctgtttggaaagagctacaaggagtgcgtctgcaagatcaat
gaggattgcacgctgccacgctggcacatgaacgacttcttccactcctttctgatcgtg
ttccgtgtgctgtgtggagagtggatagagaccatgtgggactgcatggaggttgctggc
cagaccatgtgccttattgtttacatgatggtcatggtgattgggaacctcgtggtcctg
aacctgtttctggctctgttactgagttcatttagttctgacaatctcacagcaattgaa
gaagacaccgatgcaaacaacctccagattgcagtggccagaattaaaagaggaatcaat
tatgtgaaacagaccgtccgtgaatttatcttaaaatcattttccaaaaaaccaaagggt
tccaaggacacaaaacgagcagtagatccaaacaacaaaaaagaaaactatatctcaaac
cgtacacttgctgagatgagcaaagatcacattttccacaaagaaaaggataaaatgagt
ggttatgggagcagtatagacagaagttttatggatgaaaatgattaccagtcctttatt
cacaatcccagtctcacggtgacagtgccaatcgcacctggggaatctgatttggaaaat
atgaacactgaagaacttagcagtgactcggacagcgagtacagcaaggagagacggaac
cgatcaagttcctctgagtgcagcacagttgataaccctctgccaggagaaggagaagaa
gcagaagccgagcctgtaaactcagatgagccagaggcatgttttacagatggttgtgta
cggagatttccatgctgccaagttaatgtggactctgggaaagggaaagtctggtggacc
atcaggaagacctgctacaggatagttgaacatagctggtttgaaagctttattgtcctc
atgatcctgctcagcagtggagctctggcttttgaagatatatacattgaaaagaaaaaa
accattaagactatactggagtatgctgacaagatattcacctacatcttcattttggaa
atgcttctaaaatgggtggcatatggatataaaacatatttcaccaatgcctggtgttgg
ttggacttcttaattgttgatgtatctctggttactttagtagccagcactcttggctac
tcagaccttggccccattaaatccctgcggacactaagggctctaagacccctaagggcc
ttgtctagatttgaaggaatgagggtggtggtcaatgcactcataggagcaatcccttcc
atcatgaatgtgctccttgtatgtcttatattctggctaatatttagcatcatgggagtc
aatctgtttgctggcaagttctatgagtgcgttaacatgacagatggggaacgatttcct
acaactaaagttgcaaaccgttctgagtgttttgcccttatgaatgttagtggaaacgtg
cgatggaaaaacctgaaagtgaactttgataacgttgggcttggttacctgtcgctgctg
caagttgcaacattcaaaggatggatggatattatgtatgcagctgttgattctgtaaat
gtaaatgagcagccgaaatatgaatacagcctctacatgtatatttattttgtcatcttt
atcatctttgggtcgttcttcactttgaacttgttcattggtgttatcatagataacttc
aaccaacagaaaaagaagcttggaggtcaagacatctttatgacagaagaacagaagaaa
tactacaatgcaatgaagaagctgggatccaagaaaccacaaaaaccaattcccaggcca
gggaacaaattccaaggatgtatatttgacttagtgacaaatcaagcctttgatatcacc
atcatggtgcttatttgcctcaacatggtaaccatgatggtagaaaaagaagggcaaagt
gattacatgacagatgttttgtattggatcaacgtggtcttcattatcctgttcactggg
gagtgcgtgctgaagctgatctccctcagacattactacttcactgtgggatggaacatt
tttgattttgtggtagtgatcctctccattgtaggaatgtttctggccgagatgatagaa
aagtactttgtgtcccctaccctgttccgagtcatccgcttggccaggattggccgaatc
ctacgcctgatcaaaggagccaaggggatccgcacgctgctttttgctctaatgatgtcc
cttcctgcgctgttcaacatcggcctcctgcttttcctggtcatgttcatctatgccatc
tttgggatgtccaactttgcctatgttaaaaaggaagccggaattaatgacatgttcaac
tttgagacctttggcaacagcatgatctgcctgtttcaaatcaccacctctgcaggctgg
gacggactgctggctcccatcctcaacagtgcacctcctgactgtgacccaaaaaaaatt
catccaggaagtcccgtggaaggagactgtgggaacccgtctgtggggattttctacttt
gtcagctacatcatcatatccttcctggttgtggtcaacatgtacatcgccgtcatcctg
gagaacttcagcgtcgccactgaagaaagcactgaacccctgagtgaggacgactttgag
atgttctatgaggtctgggagaagttcgaccctgatgccactcagttcatagagttctgc
aagctctctgactttgcggctgccctggatcctccccttctcatcgcgaagcccaacaaa
gtccagctcattgccatggatctgcccatggtgagcggagaccgcatccactgcctggac
atcttatttgcttttacaaagcgggttttgggtgagggcggagagatggattctcttcgt
tcacaaatggaagaaaggtttatgtctgcaaatccttccaaagtgtcctatgaacctatt
acaaccacactaaaacgaaaacaagaggatgtatctgctactatcattcagcgtgcttac
agaaggtaccgccttcggcaaaacgtcaaaaatatatcaagtatatacataaaagatgga
gacagggatgacgacttgcccaataaagaagatatagtttttgataatgttaacgagaac
tcaagtccagaaaagacagacgcaaccgcctctgccgtctctccaccttcgtatgacagt
gtcacaaagccagatcaagagaaatatgaaacagacaaaacagaaaaggaagacaagggg
aaggatgggaaagaaagcggggaatag
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integrated database retrieval system
