KEGG   Peromyscus leucopus (white-footed mouse): 114691653
Entry
114691653         CDS       T07241                                 
Symbol
Polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu03020  RNA polymerase
pleu03420  Nucleotide excision repair
pleu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114691653 (Polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    114691653 (Polr2d)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    114691653 (Polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pleu03021]
    114691653 (Polr2d)
   03400 DNA repair and recombination proteins [BR:pleu03400]
    114691653 (Polr2d)
Transcription machinery [BR:pleu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     114691653 (Polr2d)
DNA repair and recombination proteins [BR:pleu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      114691653 (Polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 114691653
NCBI-ProteinID: XP_028722914
LinkDB
Position
19:21321301..21326182
AA seq 142 aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggcgggcggcagcgatccgcgggctggcgacgtggaagaagacgcctctcagctc
atctttcccaaagagtttgaaacagctgagacactcctaaactctgaagttcacatgctt
ctggagcatcgaaagcaacagaatgagagtgcagaagatgagcaggaactttcagaggtt
ttcatgaaaactctaaactatacagcccgtttcagtcgtttcaaaaacagagagaccatt
gccagtgttcgtagcttgcttctccagaaaaagctacataaatttgagttggcctgttta
gccaatctttgtccagagactgctgaggagtccaaagctctgattccaagcctggaaggg
cgttttgaagatgaggaactgcagcagattctcgatgatatccagaccaagcgcagcttc
cagtactaa

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