Peromyscus leucopus (white-footed mouse): 114691792
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Entry
114691792 CDS
T07241
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03013
Nucleocytoplasmic transport
pleu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114691792
09122 Translation
03013 Nucleocytoplasmic transport
114691792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114691792
03041 Spliceosome [BR:
pleu03041
]
114691792
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114691792
Spliceosome [BR:
pleu03041
]
Complex C
Other components
EJC/TREX
114691792
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114691792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
HetE-N
Motif
Other DBs
NCBI-GeneID:
114691792
NCBI-ProteinID:
XP_037065133
LinkDB
All DBs
Position
10:88947389..88982980
Genome browser
AA seq
1588 aa
AA seq
DB search
MAMASATVVVPAEWIKNWEKSGRGEFLRLCRILSESKSRDTLACRDFQQALYELSYHVIK
GTLKPEQASNVLSDISEFREDIPLILADIFCILDIETNCLEEKSKRDHFTQLVLACLYLV
SDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIVE
LGQDLSGNITSDLILEILKSLIGCFNLDPNRVLDIILEVFECRPEHHDFFISLLEAYMNM
CEPQTLCHILGFKFKFYQEPNGETPSSLYTVAAVLLQFNLIDLDDLYVHLLPADSCIMNE
YKREIVEAKHIVRKLTMVVLPSDKSDEREKEKKKDDKVEKAPDNQKLGLLEALLTIGDWQ
HAQSIMDRMPPYYAASHKVIALAICNLIHVTIEPLYRRVGVPKGAKGSPVNALQSKKSPK
QAESFEDLRRDVFSMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGKQENKEKMEVIF
SCLLSVTDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYHSHPLLVK
VKAHTVDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYVLSQIQKYDNLITPVVDS
LKYLTALNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEVTEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTDDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWEDISPQFYTTFWSLTMYDLAVPHTSYE
REVNKLKIQMKAIDDNQEMPLNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDSVYCAHFVELVHQQKTPNFSTLLCYDRV
FSDIIYMVASFTENEASRYGRFLCCMLETVTRWHSDRSTYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKKPDLYALAMVYSGQLKSRKTYMIPENEFHHKDPPPRNAATSV
QNGPSSGLPSSIGSTSKSDESSTEEADKSRERSQCGVKAVNKASSAIPKGNSNNGISGSN
TKAVKENDKEKGKEKEKEKKEKTPAVIPEARVLGKDNKEKPKEEQPSKDEKIRDTKERMP
KSDKDKEKLKKEEKAKDEKFRIIVPNVESKSTQEREKEKEPSRERDLAKEMKSKETVKGG
EKTPVSVSLKSPVSRTDNAEPEREKRRKVDSHPSPSHSSTIKDSLVKLKESSAKLYINHT
LPPLCKSKERETEKKDLEKSRERSREREKKDEKDRKERKRDYSNNDREVPLDLIKRRKDE
NGILAVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGDSFKPEKMDKISSGKKESGHDK
EKVEKKEKWDSSGDKEEKKHHKSSDKHR
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcctctgcaactgtggtggttcctgcggagtggatcaagaactgggagaaa
tctgggagaggcgagtttttgcgtttatgccggattctcagtgaaagtaaaagccgcgac
actttggcttgtagagatttccaacaagctctctatgaattgtcataccatgtcattaaa
ggaactttaaagcctgaacaggcatcaaatgttcttagtgacatcagtgaatttcgtgaa
gatatcccacttattcttgctgatatattctgcatattagacattgagacgaattgttta
gaagaaaaaagcaagagagatcactttacacaattggtattagcatgtttatatttagtt
tcagacacagttctaaaggaacgcttggatccagaaacattggaatcattaggccttatt
aagcaatcacagcagttcaatcaaaagtcagttaaaatcaagacaaaactcttttataaa
cagcagaagttcaatttgttaagagaagaaaatgaaggttatgccaagcttattgttgaa
ttggggcaagatttatctggaaatattactagtgatttaatcttagaaattctcaaatct
ttaataggatgttttaatctggatcccaatcgagttttggatatcattttagaagtgttt
gagtgtaggccagaacaccatgacttctttatatctttattagaagcctacatgaatatg
tgtgaaccacaaacactgtgtcatattcttggattcaaattcaagttttaccaggagcca
aatggtgagactccatcatctttgtatacagttgcagcagtacttctgcagtttaatctt
attgatttggatgatctttatgtacaccttcttccagctgatagttgcattatgaatgaa
tacaaacgagaaattgtggaagccaagcacattgttagaaaacttactatggttgtattg
ccttctgacaaaagtgatgaacgagagaaagaaaagaaaaaagatgataaagtagagaag
gcacctgacaatcaaaagcttggcttgttggaagccttgttaactattggtgattggcag
catgcacagagtattatggatcggatgcctccgtactatgcagcatcacataaagtaata
gcccttgctatttgcaatcttatacatgtaactattgagcctctttaccgaagagttggt
gttcctaaaggtgctaaaggctcacctgtcaatgctttacaaagcaagaagtcaccaaaa
caggcagagagctttgaggacttaaggagagacgtatttagtatgttctgttatcttggt
cctcacctttcccatgatcccatcttatttgcaaaggttgttcgcataggcaagtcattt
atgaaggaatttcagtctgatgggaaacaagaaaataaagagaaaatggaagttatcttt
agttgtttgcttagtgttactgatcaggtactgcttccgtctctttctttgatggattgc
aatgcatgtatgtcagaggaactatggggaatgtttaaaacatttccttatcagcataga
taccgcttatatggccagtggaagaatgagacttaccacagtcacccacttttagtaaaa
gttaaagcccatacagtagacagagccaagtacatcatgaagcgtctaaccaaggaaaat
gtgaagccttcaggaagacagattgggaaactgagccacagcaatccaaccattttgttt
gattatgtcttgtcacaaatacagaagtatgataacttaataacacctgtggtagactca
ttgaaatatctcactgcgttgaattatgatgttttggcctactgtatcatcgaggcatta
gctaatccagaaaaagaaagaatgaaacatgacgacacaaccatctcaagctggcttcag
agtctggctagtttctgtggtgcagtttttcgtaaatacccaattgatcttgctggtctt
cttcagtatgtagccaatcagttaaaggcaggcaaaagttttgacctgcttatattgaaa
gaagtggttcaaaagatggcaggcatagaagttacagaagaaatgacaatggagcagcta
gaggctatgactggtggagagcagctgaaagcggagggtggatattttggccagataaga
aacactaaaaaatcctctcagagattgaaggatgcactactggaccatgatcttgccctt
cctctttgtttgcttatggctcagcagaggaatggggtgatctttcaggaaggcggagag
aaacatttgaaacttgtcggaaagctgtatgaccagtgtcatgatactttggtacagttt
ggtggatttttagcatcaaatttaagcacagatgactacataaagagagtaccttcaatt
gatgtgctttgtaatgaatttcatacaccccatgatgcagcattttttctgtctcggcca
atgtatgcacaccatatttcatcaaagtatgatgaacttaagaaatcagaaaagggaagt
aaacagcaacataaagtccataagtacattacatcgtgtgagatggtgatggctcctgtc
catgaagcagtggtctccttacacgtttccaaagtctgggaagacatcagccctcagttc
tataccacattctggtctctcacaatgtatgaccttgcagttccacacaccagctatgaa
cgagaagtcaataaactcaagatccagatgaaagcaattgacgacaatcaagaaatgcct
ctgaataaaaagaaaaaagagaaagagcgctgtactgccctccaggacaagcttcttgaa
gaagaaaagaaacagatggagcatgtacagcgagtgctacagagactgaaattggaaaag
gacaactggctcttagcaaaatccactaaaaatgagaccatcacaaagtttctccagttg
tgtatatttcctcggtgtattttttcagcaattgattctgtttactgtgctcattttgtt
gagttggtccatcaacaaaagactccaaatttctccacacttctctgctatgaccgagtt
ttctctgacataatttacatggttgctagctttactgaaaatgaagctagtcgatacggg
agatttctttgctgtatgttagagactgtgactcggtggcatagtgacagatccacctat
gagaaggaatgtggaaactatccaggattccttactatattacgagcaactggatttgat
ggtggaaataaagctgatcagttagattatgagaattttcgacatgttgtacataaatgg
cattataaactaaccaaggcatcggtacattgccttgagacaggtgaatatactcatatc
aggaatatcttgattgtgctaacaaaaatactgccatggtaccccaaagttttaaatctg
ggtcaggctttggaaagaagagtgcataagatctgccaagaagagaaagaaaagaagcca
gacctatatgcactagcaatggtctactctgggcagctgaaaagcagaaagacatacatg
atacctgaaaatgaatttcatcacaaagatcctcctccaagaaatgctgctacaagtgta
caaaatgggcctagtagtgggctgccatcatctataggaagtacatctaagtcagatgaa
agcagtactgaagaggctgacaagtcacgggaaaggtctcagtgtggtgtgaaagctgtt
aataaagcttctagcgccataccaaaagggaattcaaacaatggaattagtggctctaac
accaaagctgttaaggaaaatgacaaagaaaaggggaaagagaaagaaaaagaaaaaaaa
gagaagaccccagctgttattccagaggctagggtacttggtaaagacaataaagaaaaa
cccaaggaagaacagccaagtaaagatgagaaaataagagataccaaggaaagaatgcct
aaatctgacaaagacaaggaaaaattaaagaaggaggaaaaagctaaagatgagaagttc
aggatcatcgtccccaatgtagaatcaaaatccactcaagaaagagaaaaagagaaagag
ccatcaagagaaagagatttagcaaaggaaatgaagtcaaaagaaactgttaaaggaggg
gaaaaaacaccagtttctgtgtccttgaaatccccagtttcccgaacagataatgcagag
cccgaaagagaaaaacgtcgaaaggttgattcccacccttcaccatcccattcttccaca
ataaaggacagtctggtcaaactcaaggagtcttcagcaaagctctacatcaaccacact
ctaccgccattgtgcaagagtaaggagagagaaacggagaagaaagatttggagaagtca
agggagagatccagagaaagagagaagaaagacgaaaaggacaggaaagagcggaaaagg
gattattcaaacaatgaccgggaagtgcccctagacttaatcaaaaggcggaaggatgaa
aatggaatattggcagtttcaaaacacaaaagtgaaagtccctgtgagtctccttatcca
aatgagaaagacaaggaaaaaaataagtcaaagtcttcaggcaaagaaaaaggtgattca
tttaaacctgaaaagatggataaaatatccagtgggaaaaaggagtctggacatgataaa
gaaaaggtagaaaagaaagagaaatgggacagttctggagataaggaagagaagaagcat
cataagtcctcagacaagcacagataa
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integrated database retrieval system
