Peromyscus leucopus (white-footed mouse): 114691832
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Entry
114691832 CDS
T07241
Symbol
Rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04659
Th17 cell differentiation
pleu04710
Circadian rhythm
pleu05017
Spinocerebellar ataxia
pleu05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
114691832 (Rora)
09159 Environmental adaptation
04710 Circadian rhythm
114691832 (Rora)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
114691832 (Rora)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
114691832 (Rora)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114691832 (Rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pleu03310
]
114691832 (Rora)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
114691832 (Rora)
Nuclear receptors [BR:
pleu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
114691832 (Rora)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
114691832
NCBI-ProteinID:
XP_028723244
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Position
7:complement(3314747..3415634)
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AA seq
467 aa
AA seq
DB search
MYFVIAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCL
IDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQP
GEAEPLTPTYNISANGLTELHDDLSTYMDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDI
NGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQ
QITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLL
KAGSLEVVFIRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCEDFISFVFEFGKSLCSMHLT
EDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVST
LRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgtgatcgcagcgatgaaagctcaaattgaaattattccatgcaagatctgt
ggagacaaatcgtcaggaatccattatggtgtcattacgtgtgaaggctgcaagggcttt
ttcaggagaagtcagcagagcaatgccacctactcctgtcctcgtcagaagaactgtttg
atcgatcggaccagcaggaaccgctgccagcactgccggctgcagaaatgcctcgccgtg
ggcatgtctcgagacgctgtcaagtttggccggatgtccaagaagcagagagacagctta
tatgctgaggtgcagaagcaccggatgcagcagcagcagcgagaccaccagcagcagcct
ggggaggccgagccgctgacgcccacctacaacatctcagccaatgggctgacggaactg
catgacgacctgagcacctacatggacgggcacacccccgagggcagcaaggccgactcc
gccgtcagcagcttctacctggacatccagccctcccctgaccagtcgggactggacatc
aatgggatcaaacccgaacccatatgtgactacacaccagcatctggcttcttcccctac
tgctcctttaccaacggagagacttctccaactgtatccatggcggaactagaacacctt
gcgcagaacatatccaaatcccacctggaaacctgccagtacttgcgggaagaactgcag
cagataacatggcagaccttcctgcaggaggagatcgagaactatcagaacaagcagaga
gaggtgatgtggcagctgtgtgccatcaagattacagaagctatccagtatgtggtggag
tttgccaaacgcattgacggatttatggagctgtgtcaaaatgatcaaattgtgcttcta
aaagcaggctctctagaggtggtgtttatcaggatgtgtcgtgcctttgactctcagaac
aacaccgtgtactttgatgggaagtatgctggccccgatgtcttcaaatccttaggttgt
gaagacttcattagctttgtgtttgaatttgggaagagtttgtgttctatgcacctgact
gaagatgaaatcgcattattttctgcattcgtactgatgtcagcagatcgctcgtggctg
caggaaaaggtaaaaatagaaaagctgcaacagaaaattcagctagcccttcaacacgtc
ctacagaagaatcaccgagaagatgggattctaacgaagctaatatgcaaggtgtctacg
ttaagagccttatgtggacgacatacagaaaagctaatggcatttaaagcaatataccca
gacattgtgcgactccattttcctccactatacaaggaattgttcacttcagaatttgag
ccagcgatgcaaatcgatgggtaa
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