Peromyscus leucopus (white-footed mouse): 114692062
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Entry
114692062 CDS
T07241
Symbol
Kdm1b
Name
(RefSeq) lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pleu03036
]
114692062 (Kdm1b)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
114692062 (Kdm1b)
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
Pyr_redox
Pyr_redox_2
zf-CW
SWIRM
Thi4
DAO
HI0933_like
FAD_binding_3
Pyr_redox_3
FAD_oxidored
FAD_binding_2
Lycopene_cycl
NAD_binding_9
GIDA
AlaDh_PNT_C
2-Hacid_dh_C
NAD_binding_7
Attractin
Shikimate_DH
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
114692062
NCBI-ProteinID:
XP_028723509
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Position
5:complement(16741000..16781565)
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AA seq
821 aa
AA seq
DB search
MAAPRGRSKKRGALELSPDSLPLRSSGRQAKKKAAETAEEEEDGSSEKKYRKCEKAGCTA
MYPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTAWKRVWTSN
GKTEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTPHMARTYRCGIKLNTITKTD
IPDHCSLPEDLRVLEVANHWWYSMLIQPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTHRA
TATTGSASPGKMEPSKAAPSPLVLGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPE
YSRDPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRK
GLINTGVLTVEPGQHLLPKHYHNKSVLVVGAGPAGLAAARQLHNFGMKVTILEAKDRIGG
RVWDDKSFKGVVVGRGPQIVNGCINNPVALMCEQLGISMHKLGERCDLIQEGGRITDPTI
DKRMDFHFNALLDVVSEWRKDKTLLQDVPLGEKIEEIYRAFVKESGIQFSELEGQVLQFH
LSNLEYACGSSLHQVSARSWDHNEFFAQFAGDHTLLTPGYSTIIEKLAEGLDIRLKSPVQ
SIDYTGDEVQVTTTDGMGHSAQKVLVTVPLAILQRGAIQFNPPLSEKKMKAINSLGAGII
EKIALQFPYRFWDSKVQGADFFGHVPPSASQRGLFAVYYDMDPQQSVLMSVITGEAVASL
RTMDDKQVLQQCMGVLRELFKEQEVPDPTKYFVTRWSTEPWIQMAYSFVKTFGSGEAYDI
IAEEIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacctcgagggaggtcaaagaagagaggagcgttggagctttctccggacagc
ctgcctctgaggagctccgggaggcaggccaagaagaaagcagcagagaccgcagaggag
gaggaggatggttcgtcggaaaagaagtacaggaaatgtgaaaaggcaggctgtactgca
atgtatcctgtgtgctttgcaagtgcttcggaaagatgtgccaaaaacggctatacctcc
cgatggtaccacctttcctgtggggaacatttctgtaatgaatgctttgaccactactac
agaagccacaaagatggatacgacaaatacactgcatggaaaagagtgtggaccagcaat
gggaagacagagccaagccccaaggcgttcatggcagaccagcagctgccctactgggtt
cagtgcacaaaacccgagtgtggaaagtggaggcagcttaccaaggaaatccagctcact
ccacacatggcaagaacttaccgctgtggcataaaactaaataccattaccaagactgac
atccctgatcattgttctctccctgaggacctaagagtgctggaagttgccaaccactgg
tggtactccatgctgatccagcctcccttgctgaaggacagcgtggccgccccactgctc
tctgcctactaccccgactgtgtcggcatgagcccctcctgcaccagcacgcaccgtgcc
acagccaccaccggcagtgccagcccgggcaagatggagccctccaaggcggccccctct
ccactcgttctaggcatgaaccgctacttccagcccttctaccagcccaatgagtgtggc
aaagccctgtgtgtgaggcccgacgtgatggaactggatgagctttatgagtttccagag
tattcccgagaccccaccatgtacctagctttgagaaacctcatcctcgctctgtggtac
acaaactgcaaagaagctcttactcctcagaagtgcattccccacatcatcgtccggggc
cttgtgcgcattcgatgtgtccaggaagtagagaggattctttactttatgacgaggaaa
ggcctcatcaacacaggcgttctcaccgtggaacctggccagcaccttcttcctaaacac
taccacaataaatcggttctggttgttggggctggtccagcaggcttagcagctgctagg
caactacataactttgggatgaaggtgactatcctggaagccaaagatcgaatcggaggc
cgagtatgggatgacaagtcttttaaaggcgtcgtagtgggaagaggaccccagattgtc
aatggctgtattaataacccagtagcactaatgtgtgagcaacttggcatcagcatgcat
aagttgggagagagatgtgacttaattcaggaaggtggacggataactgaccccactatt
gacaagcgcatggattttcattttaatgctctcttggatgttgtctctgagtggaggaag
gataagactctgctccaagatgtccctttaggagagaagatagaggagatctaccgagct
tttgtgaaggagtctggcatccagttcagcgagctggagggccaggtgttacagttccat
ctgagtaacctggagtacgcctgtggcagcagcctgcaccaggtgtctgcacgctcctgg
gaccacaatgaattctttgcacagtttgctggtgaccatactcttctaactcctggatac
tccactatcattgaaaaactggctgaaggactagacattcgcctcaaatctccagtgcaa
agtatagattatactggagatgaagtgcaagttaccacgacagatggtatggggcattct
gcacaaaaggtattagtcactgtaccattggccatactacagagaggtgccatccagttt
aatccaccattgtcagagaagaagatgaaggccatcaatagcttgggcgcaggcatcatt
gaaaagattgccttgcagtttccatatagattttgggacagtaaagttcaaggggctgac
ttttttggtcatgttcctcccagtgccagccagcgagggctctttgctgtatactatgac
atggacccccagcagagtgtactgatgtccgtaatcacaggggaggcagtagcatccctc
aggaccatggatgacaagcaggtgttacagcagtgcatgggcgtccttcgggagctgttt
aaggagcaggaggtcccagatcccaccaagtattttgtcacacggtggagcacagagcca
tggatccagatggcatatagtttcgtcaagacatttggaagtggtgaggcctatgacatc
attgctgaagaaatacaaggaactgtcttttttgctggtgaggcaacaaacaggcatttc
ccacaaactgttacaggggcatatttgagtggtgttcgagaagcaagcaagattgcagcc
ttttaa
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