Peromyscus leucopus (white-footed mouse): 114692081
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Entry
114692081 CDS
T07241
Symbol
Jarid2
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03083
Polycomb repressive complex
pleu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
114692081 (Jarid2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
114692081 (Jarid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pleu03036
]
114692081 (Jarid2)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
114692081 (Jarid2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
114692081 (Jarid2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
114692081
NCBI-ProteinID:
XP_028723543
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Position
5:complement(18990403..19186073)
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AA seq
1271 aa
AA seq
DB search
MFSPDCLPSPLAPLLFGCPIAVRNLHRRLLITYRGGLLTSAREPASLRSSFLPPSLPLSF
FLCLCNDPALRMAAPRVCQVQFLVAYLEEPGIEGLLGNDQSKALGPASEQSENEKDDASQ
VSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQSQPNSPSTTPVKTVEPLLPPPATQISDL
SKRKPKTEDFLTFLCLRGSPALPSSMVYFGSSQDEEDVEEEDDETEDVKTANNNASSSCQ
STPRKGKTHKHVHNGHVFNGSNRSTREKEPAQKHKSKETTPAKEKHIDHRADSRREPASV
AQPTATPSAGSLAKGLPANHHPPPPHRSAQDLRKQVTLHVSKVNGVTRMSSLGAGTTSAK
KIREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKETKPTHHKPSSAVNHTISGKTESSN
AKTRKQVLSLGGASTSTGPAASGLKASSRLNPKSCTKEVGGRQLREGLRNSKRRLEEAQQ
VDKPQSPPKKMKGAAGIAEAPGKKASAASAEKSLLNGHVKKEVPERSLERNRPKRATAGK
NMPGKQAHGKAEGTPCENRSTSQPESSHKPHDPQGKPEKGIGKSGWTAMDEIPVLRPSAK
EFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNV
QRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLR
IPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTENDH
HKFHSLPRFEPKNGLIHGVTPRNGFRSKLKEVGQAPLKTGRRRLFAQEKEVVKEEEEDKG
VLNDFHKCIYKGRSVSLTTFYRTARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHC
GKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFST
SCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQANGTPGLQMLESNVMI
SPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAK
EMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAGLH
SSARYGSHDGNSTVADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVFCLECA
LRHVEKQKSCRGLKLMYRYDEEQIISLVNQICGKVSGKHGGIENCLNKPTPKRGPRKRAT
VDVPPSRLPSS
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgttctctcccgactgtctcccctcccccttggccccgctgctgttcggctgtcctatt
gccgtgcggaatctgcaccgccgcttgcttattacgtacaggggaggattgttgacaagt
gctcgggagcctgcctcactgcgctcttccttcctccctccctcccttcctctgtccttc
ttcctctgtctctgcaatgatccggctctgaggatggctgctccacgggtctgtcaggtg
cagtttttggtggcttatcttgaggaacctgggatagaagggctccttggtaatgaccag
tctaaggcgttaggaccagcgtcagagcagtcagagaatgagaaggacgatgcatcccaa
gtgtcctctactagcaacgatgttagttcttcagattttgaagaagggccgtcgaggaaa
aggcccaggctgcaagcacaaaggaagtttgctcaatctcagccgaacagtcccagcaca
actccagtgaagacagtggagcctttgctacccccgccagctactcaaatttctgacctc
tctaaaaggaagcctaagacagaagactttcttacctttctctgccttcgaggttctcct
gcgctgcccagcagtatggtatattttgggagctctcaggatgaggaggatgtcgaagag
gaagatgacgagacagaagatgtcaaaacagccaacaacaatgcttcatcttcgtgccag
tccacccccaggaaaggaaaaacccataagcatgtacacaatggacatgtcttcaatggc
tccaacaggtcaacacgggagaaagaacccgctcaaaaacacaaaagcaaagagaccact
ccagcaaaggagaagcacatcgaccacagggcagatagccgaagggagccggcttcagtg
gcccagcccacagccaccccctctgcaggctccttggccaaggggcttcctgccaaccac
caccctccccctccgcatcggtcggctcaggacttacggaaacaggtaaccctccatgtg
tctaaggtaaatggagtcactcgaatgtcatctctgggtgcaggtacaaccagtgccaaa
aagatccgagaagtcagaccttcaccatccaaaactgtgaagtacactgccacagtgacc
aaggggactgtcacatacaccaaagccaagagagaactggtcaaggaaaccaaacccacc
caccacaagcccagttcagctgtcaaccatacaatctcagggaaaactgaaagtagcaat
gcaaaaacccgcaaacaggtgctatccctcgggggggcgtccacgtccaccgggcccgct
gccagtggcctcaaggccagcagcaggttgaacccaaagtcatgcactaaggaggtgggg
gggcggcagctgagggaggggctgcggaattccaagaggagactggaagaggcacagcag
gtggacaagccgcagtcaccccccaagaagatgaaaggggcagcaggcattgccgaagcc
cctggcaaaaaggcctcagcggcttcagcagagaagtctctgctgaatggacacgtgaag
aaagaagtgcccgagcgaagtttggaaaggaatcggccgaagcgggccacggctggtaag
aacatgccgggcaaacaagcacatggcaaggcagagggcaccccctgtgaaaatcgttct
acctcgcaacccgagtcctcgcacaagccgcatgatccgcagggcaagcccgagaagggg
atcggcaagtctgggtggacagcgatggacgagatccctgtcctcaggccctccgccaag
gaattccatgaccctctcatctacattgagtcagtacgtgctcaggtggagaagtacggg
atgtgtcgtgtgattccccctccggactggcggccagagtgcaaactcaacgatgagatg
cgctttgtcacgcagatccagcacatccataagctgggccggcgctggggccccaatgta
cagcggctcgcctgcataaaaaagcacctcagatctcagggcatcactatggatgaactc
cccctcataggaggctgtgagcttgacctggcctgctttttccggctgattaatgagatg
ggcggcatgcagcaagtgactgacctcaaaaaatggaacaaactagcagacatgctgcgc
attcctaagactgcccaggatcggctggccaagctgcaggaggcctactgccagtacctg
ctctcctatgactccttgtcccctgaggagcaccgacggctggagaaggaggtgctgatg
gagaaggagatcctagagaagcgcaaagggccgttagaggggcacacagagaatgaccat
cacaagttccactccctgcctcgctttgagcccaaaaatgggctcatccatggtgttaca
cccaggaatggcttccgtagcaagctcaaggaggtgggccaggccccactcaagacaggc
cggcggcgattgttcgctcaggaaaaagaagtggtcaaagaggaggaagaggacaaaggt
gtcctcaatgacttccacaagtgcatctataagggaagatctgtttctctaacaactttt
tatcgaacagcaagaaacatcatgaacatgtgtttcagcaaggagcctgcaccagcagag
atcgagcaagagtactggaggttagtggaagagaaggactgtcatgtggcagtccactgc
ggaaaggtggacactaatactcatggcagcgggttcccggtgggaaaatcagagcccttt
tcaaggcatggatggaacctcaccgtcctccccaataacacagggtccatccttcgtcac
cttggtgctgtgcctggagtgactattccctggctaaatattggcatggtcttttctacc
tcatgctggtctcgagaccaaaatcaccttccatatattgactacttacacactggtgct
gactgcatttggtattgcattcctgctgaggaggagaacaagctggaggacgtggtccac
accctgctgcaggccaatggtaccccagggctgcagatgctggagagcaacgtcatgatc
tccccagaggtgctgtgtaaagaggggatcaaggtccacaggactgtacagcagagtggg
cagtttgttgtctgcttcccggggtcctttgtgtccaaagtatgttgtggctacagcgtc
tcagaaacagtgcactttgctaccacccagtggaccagtatgggcttcgagactgccaag
gagatgaagcgccgccatatagctaagccattctccatggagaagttgctctaccagatt
gcacaagcagaagcaaaaaaggaaaatggtcccaccctcagtaccatctcagcccttctg
gacgagctcagggatacggagctgcggcagcgcaggcagctgtttgaggctggccttcac
tcttccgcccgctatggcagccatgatggcaacagcacggtggcagatgggaagaaaaag
cctcgaaagtggctgcagctggaaacgtcagagaggaggtgccagatctgccagcatttg
tgctacctgtccatggtggtacaggagaacgagaacgttgtcttctgtctggagtgtgca
ctgcgccatgtggagaaacagaagtcttgccgtgggctgaagctgatgtaccgctacgat
gaggagcagatcatcagtttggtcaaccagatatgtggcaaagtgtctggcaaacacggc
ggcattgagaactgtctcaacaaacccacaccaaaaagaggcccccgcaagagagcgacc
gtggacgtgccgccatctcggctgccatcctcctga
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