Peromyscus leucopus (white-footed mouse): 114692328
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Entry
114692328 CDS
T07241
Symbol
Rims1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04721
Synaptic vesicle cycle
pleu04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
114692328 (Rims1)
04721 Synaptic vesicle cycle
114692328 (Rims1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114692328 (Rims1)
Membrane trafficking [BR:
pleu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
114692328 (Rims1)
Small GTPases and associated proteins
Rab associated proteins
114692328 (Rims1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
114692328
NCBI-ProteinID:
XP_028723837
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All DBs
Position
16_21:59672819..60161165
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AA seq
1651 aa
AA seq
DB search
MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKCVVRD
MAKPAACKTPRNAESQPHQPPLNIFRCVCVPRKPSSEEGGPERNWRLHQQFESYKEQVRK
IGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKV
VMWVCNLCRKQQEILTKSGAWFFGSGPQQPSQDGTLSDTGTGAGSEVPREKKARLQERSR
SQTPLSTAAASSQDTASPGAPLDRSKGAEPSQQALGPEQKQASRSRSEPPRERKKPPGLS
EQNGKGGLKSERKRVPKSAVQPGEGTAEERERKERRETRRLEKGRSQEYPDRPEKREDGR
VAEDEKQRKEEEYQTRYRSDPNLARYPVKPPPEEQQMRMHARVSRARHERRHSDVALPHT
EAAAAPAEATAAGKRAPAATRASPPESPRARAPAAQPPAEHGPLAPRPVPGPAEPPEPRV
PEPLRKQGRLDPGSAVLLRKAKREKAESMLRNDSLSSDQSESVRPSPPKPHRPKRGGKRR
QMSVSSSEEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVT
WQPSKEGDRLIGRVILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADV
VGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPP
LESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQA
TDLPPRVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRER
MLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDQSSLPLPQPSPFMPR
RHIHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRSSARESKATTLAVPEQQRT
THHRSRSVSPHRGDDQGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRSR
HMESQYSSEQDSELLMLPRAKRGRSAECLHTTSELQPSLARAKSASTNCLRPDTSLHSPE
RERGRWSPSLDRRRPPSPRIQIQHASPENDRHSRKSERSSIQKQTRKGTASDADRVLPSC
LSRRGYAIPRATDQPVIRGKHPTRSRSSEHSSVRTLCSMHHLAPGGSAPPSPLLTRTHRQ
GSPTQSPPADTSFSSRRGRQLPQVPVRSGSIEQEQEKCNSSTKASLVVEERTRQMKMKVH
RLKQTAGSGSSQELDREQYSKYNVPNDQYRSCDNVSAKSSDSDVSDVSAVSRTSSASRLS
STSFMSEQSERPRGRISSFTPKMQGRRMTSGRAIIKSTSVSGEMYTLEHNDGSQSDTAVG
TVGAGGKKRRSSLSAKVVAIVSRRSRSTSQLSQTESGHKKLKSTIQRSTETGMAAEMRKM
VRQPSRESTDGSINSYSSEGNLIFPGVRVGPDSQFSDFLDGLGPAQLVGRQTLATPAMGD
IQIGMEDKKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLD
PLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP
SSLVDPTLTPLTRRASQSSLESSSGPPCIRS
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggccgtggggccccgcggtcctcgcccacccacggtgcctccccctatgcaa
gaactgcccgacctgagccacctgaccgaggaggagaggaacattatcatggcagtgatg
gaccggcagaaggaagaggaggaaaaagaagaggccatgctcaagtgtgttgtcagggac
atggcgaagcctgctgcttgcaaaacacccagaaatgctgaaagccagccccatcagcca
ccactgaacattttcagatgtgtctgtgttcccagaaagccaagcagcgaagagggaggc
ccagaaagaaactggagattgcatcaacagtttgaaagctataaggagcaagtgagaaaa
atcggagaggaagcaaggcgttaccagggcgagcacaaagacgatgccccgacatgtgga
atctgtcataagacaaagtttgctgatggatgtggccatctttgctcatattgtcgcacc
aagttctgtgcacgctgtggaggccgtgtgtctctgcgatcgaacaatgaggacaaagtg
gttatgtgggtatgcaatttatgtcgaaagcaacaagaaatcttaaccaaatctggagca
tggttctttggaagtggcccccagcagcccagtcaggatgggactctgagtgacacaggt
acaggtgctggatctgaggtgcccagagaaaagaaagcaagactccaagagcgatcgagg
tctcagacacccctgagcacagcagccgcctcttcccaggacacagcttcccctggtgca
cccctggacaggagcaaaggggctgagccttcacagcaagccttgggacctgaacagaag
caggcatcaaggtctagaagtgagccacccagggaaaggaagaagcctccagggctttcg
gagcagaatggcaagggaggcctgaagagtgagcgcaaacgcgtgcctaagtccgcggtg
cagcccggggaggggaccgcggaagagcgggagcggaaggaaaggcgggaaacccgcagg
ttggagaaagggcgctcccaggagtacccggaccggccggagaaacgagaggatggcagg
gtggcggaggacgagaagcagaggaaagaggaggagtaccagaccaggtaccgcagcgac
ccgaacctggcgcgctaccccgtgaagccgcctcccgaggagcagcagatgcgcatgcac
gcccgggtgtcccgcgcgaggcacgagcggcgccacagcgacgtggcactcccgcacacc
gaggctgcagccgcgccggccgaggccacggcggcgggcaagcgcgcgccagccgctacc
agggcctctccgcccgagtccccccgcgcgcgcgcgcccgccgcccagcctcccgccgag
cacggcccgctggcgccacggcccgtcccgggtcccgcagagccgcccgagccgcgcgtc
cccgagccgctccgtaagcagggccgcctggacccgggctcggccgtgctcctgcgcaag
gccaagcgcgagaaggcagagagcatgctgcggaacgactcgctcagctccgaccagtcc
gagtccgtgcgaccgtccccgcccaagccgcaccggcccaagcggggaggcaagaggcgg
cagatgtcggtgagcagctcagaggaagagggcgtgtccaccccggagtacaccagctgc
gaggacgtggagctggagagcgagagcgtgagcgagaaaggtgatttggattactactgg
ttggatcctgcgacgtggcacagccgggaaacatcgcctatcagttcgcatcctgtaacg
tggcagccatcaaaagagggagaccgattaattggccgtgttattcttaacaaaagaaca
accatgcccaaagaatcaggtgcattattgggtctgaaagtggttggaggaaaaatgaca
gatttaggacgtcttggtgctttcatcaccaaagtaaagaagggtagcctggcagatgta
gttggacacctaagagcaggggatgaagttctagagtggaatggtaaacccctgccggga
gcaacaaacgaagaagtttacaacattattttagaatcaaaatcagaacctcaagttgaa
attattgtttcaaggcctattggtgacatcccccggatccctgagagttcccatcctccc
ctggagtctagctcaagttcctttgaatctcagaagatggaaaggccttccatttctgtt
atttctccaaccagccctggagctctgaaagacgccccccaagtcctgccagggcaactc
tctgtgaagctgtggtatgataaagtgggacatcagctgattgtgaatgttctacaagca
actgatctaccccctagagtagatgggcgtcccaggaacccctatgtaaaaatgtatttt
cttccagatagaagtgacaagagtaaaagaaggacaaagacagtgaagaaaattctagaa
ccaaaatggaaccaaacatttgtctactcacatgtccatcgtagggatttccgagagcga
atgttagaaattaccgtgtgggatcagccgagagtgcaagaggaagagagtgaatttctt
ggagagatcctcatagaattggaaacggcgcttttagatgatgagccccactggtataaa
ctccagacacatgatcagtcctcactacctctgcctcagccgtccccgttcatgccaagg
cggcatatccatggagagagctccagcaaaaaactacaaagatctcagcgaatcagtgat
agtgacatctcagattatgaggttgatgatggtattggagtagtgcctccagtgggttat
agatctagtgctagagaaagtaaagcaacaacattagcagtgccagagcagcaaagaacg
actcatcaccgctcccgctcagtgtctcctcatcgcggcgatgatcagggaaggccgcgc
tcacgtttaccaaatgtgccattacagaggagcttagatgaaattcatccaacacgaagg
tcacgttctccaaccagacaccatgatgcctcccgaagtccagtcgatcacagatccaga
catatggaaagtcagtattcatcagaacaagacagtgagcttctcatgctgcccagagca
aaacgaggacgaagtgcagaatgcctacacacgaccagtgagctacagccctcccttgcc
agggctaagagtgctagtaccaactgcttgagaccagacactagtttgcattcaccagaa
cgagaaaggggtagatggtccccctccctagataggaggcgacctcctagccccaggatt
caaatccagcatgcatctccggagaatgacaggcactccagaaagtctgaaagatctagc
atccaaaaacagactaggaaaggcacagcctctgatgcagacagggttctcccatcatgc
ctttctagaaggggatacgcaatcccaagagcaactgatcaaccagtcattaggggaaag
catcccactcgctcccggtcgagcgagcactctagtgtcagaaccctgtgttctatgcac
caccttgcccctggagggtcggcgccaccttctccgcttctgacaagaacgcaccgacaa
ggaagcccaacccagtctcctccagcagatacgtccttcagcagtcgccggggaagacag
cttccacaggtgccggttcgaagtggcagtatagaacaagaacaagaaaaatgtaactct
tctactaaagcaagcttagtagtggaggagcgaaccagacagatgaaaatgaaagtgcac
cgactgaagcagacagcagggtctgggtctagtcaagaacttgatcgcgagcaatattcc
aagtataacgtacctaacgatcagtacagaagctgtgataacgtctctgccaagtcatca
gacagtgacgtcagtgacgtgtccgccgtttcccgaaccagcagtgcctcacgcctcagc
agcacaagcttcatgtctgagcagtccgagcgccccaggggtaggatcagttcatttacc
cccaaaatgcaaggcagacggatgacttcaggaagagccatcatcaagagcaccagtgta
agtggagagatgtacacactggagcataatgatggcagccagtcagacacagctgtgggg
accgttggagcaggtggaaagaagcgcagatccagcctgagtgccaaagtggtcgccatc
gtgtcgcggagaagtagaagcacatctcagctcagccagacagagtcgggccacaagaag
ttaaaaagtaccattcagcgaagtacggaaacggggatggcggctgaaatgcggaagatg
gtcagacagccaagccgagagtccacggatggcagcatcaacagttacagctcggaggga
aacttaatatttcctggagttcgagttggacccgacagccagttcagcgactttcttgac
ggactggggccagctcagcttgttggccgccaaaccctcgccacccctgccatgggtgat
atccaaatcgggatggaggataaaaagggccaattggaagttgaagttatcagagcccgg
agccttacacaaaaacctggctccaagtctacccctgcaccctatgtgaaagtatatctt
ttggaaaatggagcctgtattgccaaaaagaagacaagaattgcacggaaaactctcgac
cctttgtatcagcagtcccttgtgtttgatgaaagtccgcagggtaaagttcttcaggtg
atcgtctggggtgactacggaagaatggaccacaaatgctttatgggtgtggctcaaatc
ttgttggaagaacttgacctgtccagcatggtgattggatggtataaattgttccctccg
tcatcactggtggatcccacactcactcccctgacccgtcgggcttcccagtcatctctg
gagagttcatctgggcctccctgcatccgatcatag
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integrated database retrieval system
