Peromyscus leucopus (white-footed mouse): 114692419
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Entry
114692419 CDS
T07241
Symbol
Pcdh7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
114692419 (Pcdh7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pleu01009
]
114692419 (Pcdh7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pleu04515
]
114692419 (Pcdh7)
Protein phosphatases and associated proteins [BR:
pleu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114692419 (Pcdh7)
Cell adhesion molecules [BR:
pleu04515
]
Cadherins
Protocadherins
114692419 (Pcdh7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
Cadherin_pro
TMEM154
KIAA1549
LYRIC
MLANA
EphA2_TM
Adeno_E3_CR2
Fibulin_C
Pox_A14
Motif
Other DBs
NCBI-GeneID:
114692419
NCBI-ProteinID:
XP_028723980
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All DBs
Position
10:45532564..45947632
Genome browser
AA seq
1255 aa
AA seq
DB search
MLRMRTTGWARGRCLGCCLLLPLCLSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGGGEGRRSGPADSAPYPGGGGNSASGSGPGGSKRRLEAPEGGGGTGPGGR
SSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITD
VNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRL
DETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIRKI
GRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEGDQ
NKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLVVKVGDTNDNPPVFGQSVV
EVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPDSGDILVNTVLDRE
QTDRYEFKVNAKDKGVPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGM
VTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDP
PRSATATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTVVATVLATDSDDGINADLN
YSIVGGNPFKLFEIDPTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVN
ESVSNATVIDSQIVRSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVMM
ARYCRSKSKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASKPN
GQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQA
VQDLPPANTFVGAGDNISIGSDHCSEYSCQTSNKYSKQPFRRVTFSVVSQPQDPHQGSLQ
SCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPLPDVAL
TGKCTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGDR
NRNLLNKKLTSSYETFSAASFSKNEEANPEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggaccacgggatgggcgcgcggccggtgcttgggctgttgcctcctt
ctgccgctctgcctcagcctggccgccgccaagcagctgctccggtaccggctggcagag
gagggccccgccgacgtgcggatcggcaatgtggcctcggacctgggcatcgtgactggc
tcgggcgaggtgactttcagccttgagtctggctctgagtacctgaagattgacaacctc
accggcgagctgagcaccagcgagcggcgcatcgaccgagagaagctgccccagtgtcag
atgatcttcgacgagaatgagtgtttcttggacttcgaggtatccgtgatagggccctcg
cagagctgggtggacctgttcgagggtcgggtcatcgtgctggacatcaacgacaacacg
cccaccttcccgtcaccggtgctcacactcacggtggaggagaaccggcctgtgggaacg
ctctacctgctgcccacggccaccgatcgtgacttcggtcgcaatggaatcgagcgctac
gagctgctccaagagcccgggggtggcggtggcggcggcgaaggaaggcgctcggggccg
gcggacagcgccccctacccagggggcggcgggaacagtgcgagcggcagcggccctgga
ggttccaaacggcggctggaggcgcctgagggtggcggcgggacaggtcctggtggccga
agcagtgtgttcgagctgcaggtggcagacaccccagacggcgagaaacaaccgcagctg
atagtgaagggggcgctggaccgggagcagcgagactcctatgagctgaccctccgagtg
cgcgatgggggcgatccacctcggtcctcgcaggctatcttgagggtgctcatcaccgat
gtgaatgacaacagcccccgcttcgagaagagcgtgtatgaggctgacctggctgagaac
agcgctccgggtacccccatcctgcagttgcgcgccgcggatttggacgtgggggtcaac
ggacagatcgagtatgtatttggggctgctacggagtctgtaagaaggctactgcgtctg
gatgaaacgtcgggctggctcagtgtcttgcaccgtattgaccgggaggaagtgaatcag
ctacgattcacagtcatggcccgtgaccgcgggcagccccccaagacagataaggccacg
gtggtcctcaacatcaaggacgagaacgacaacgttccctccatcgaaatccgcaagata
gggcgcatcccacttaaggacggggtggccaacgtggcggaggacgtcctggtggacacc
cccatcgccctggtgcaggtgtccgaccgagaccaaggcgagaatggggtggtcacctgc
acggtagtaggagatgtgcctttccagcttaaaccagccagcgacacagagggcgatcag
aacaagaaaaagtacttcctgcacacgtcggccccactggactatgagaccacccgggag
ttcaacgtggtcatagtagctgtggactctggcagtcctagcctctccagcaacaattcc
ttagtggtcaaggtgggagacaccaacgacaaccctcctgtctttggtcagtctgtggtt
gaggtttactttccagagaacaacattcccggtgagagggtagccacggtgctggcgaca
gatgccgacagtgggaagaacgcagagattgcctactctctggactcctcagtgatgggg
acttttgccatagatcccgattctggggacatcttggtcaatacagtcctggaccgggag
cagactgacaggtatgagtttaaagttaatgccaaagacaaaggcgttcctgtgctgcag
ggcagcaccacggtgattgtacaggtggctgataagaatgacaatgaccctaagtttatg
caggacgtctttaccttctacgtgaaggaaaacttgcaacccaacagccctgtgggcatg
gtcaccgtgatggatgctgacaagggacggaatgcagagatgagcctgtacatagaggag
aacagtaacattttttctattgaaaacgacacagggaccatttactccacaatgtctttt
gacagggagcatcagactacatacactttccgagtgaaggctgtggatggaggagatcct
cccagatccgctacagccacagtctccctctttgtgatggacgaaaatgataacgctccc
acggtgacccttcccagaaacatttcctacaccttgctgccgccttcaagtaatgtcagg
acagttgtagctaccgtgttggcaacagacagtgacgatggcatcaatgcggacttgaac
tacagcattgtgggagggaaccctttcaagctgtttgagattgatcccaccagtggtgtg
gtttccttagtgggaaaactcacccagaagcattatggcttgcacaggctggttgtgcaa
gtgaatgacagcggccagccctcccagtccactacgactttggtgcacgtatttgtcaat
gaaagtgtttccaatgcaactgtgattgactctcagatagtcagaagtttgcataccccg
ctcacccaggatatagctggcgacccgagctatgaaattagcaaacagagactcagtatt
gtcattggtgtggtggctggcattatgacagtgattctaatcattttaattgtcatgatg
gcaagatactgcaggtccaaaagtaaaaatggctacgaagctggcaaaaaggaccatgaa
gactttttcacaccccaacagcatgacaagtctaaaaagcccaaaaaagacaagaaaaac
aaaaaatctaagcagccactctacagcagtattgtcactgtcgaagcttccaaaccaaat
ggacagaggtatgacagtgtcaatgagaagctgtccgacagcccaagcatgggccgatac
agatctgtcaacggtgggcctggcagtcccgacctggcaaggcattacaaatctagttcc
cccttgcctactgtccagcttcacccccagtcaccaactgcagggaaaaaacaccaggcc
gtacaagacctaccaccagccaacacatttgtgggagcaggagacaacatttccattgga
tcagatcactgctctgagtacagctgtcaaaccagtaacaagtacagcaaacagccattt
cgtagagtgacgttttctgttgtgagtcagcctcaggaccctcatcaggggtcactgcag
agttgctatgacagcgggctggaggagtcagaaacaccaagcagtaagagttcatcaggg
ccaagactgggtgcccttccactcccagaggacaactatgaaaggaccacgccggatggc
agtgttggtgaggcagagcatatggaaaatgattcaaggcctcttccagatgtagctctg
actggcaagtgcacccgtgaatgtgatgagtatggccactcagactcctgctggatgcca
gtgcgcacttcccctgagaggaagaagagccagcccaaactctccactttcatgcctgtc
gatgaacgaggaagccaggaaaagctggccaatggcgaagctgccatcatgggtgaccgc
aacagaaacctcctgaacaaaaagctgacctcatcctatgagaccttcagtgcagctagc
ttcagcaaaaacgaggaagccaaccctgaggatattcctttaacaaaaacaggggaatat
aagccatctcctgtcaacactctcactagaagagaagtttacctgtag
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