Peromyscus leucopus (white-footed mouse): 114692778
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Entry
114692778 CDS
T07241
Symbol
Grin1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04014
Ras signaling pathway
pleu04015
Rap1 signaling pathway
pleu04020
Calcium signaling pathway
pleu04024
cAMP signaling pathway
pleu04080
Neuroactive ligand-receptor interaction
pleu04082
Neuroactive ligand signaling
pleu04713
Circadian entrainment
pleu04720
Long-term potentiation
pleu04724
Glutamatergic synapse
pleu05010
Alzheimer disease
pleu05014
Amyotrophic lateral sclerosis
pleu05016
Huntington disease
pleu05017
Spinocerebellar ataxia
pleu05020
Prion disease
pleu05022
Pathways of neurodegeneration - multiple diseases
pleu05030
Cocaine addiction
pleu05031
Amphetamine addiction
pleu05033
Nicotine addiction
pleu05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
114692778 (Grin1)
04015 Rap1 signaling pathway
114692778 (Grin1)
04020 Calcium signaling pathway
114692778 (Grin1)
04024 cAMP signaling pathway
114692778 (Grin1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114692778 (Grin1)
04082 Neuroactive ligand signaling
114692778 (Grin1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
114692778 (Grin1)
04720 Long-term potentiation
114692778 (Grin1)
09159 Environmental adaptation
04713 Circadian entrainment
114692778 (Grin1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
114692778 (Grin1)
05014 Amyotrophic lateral sclerosis
114692778 (Grin1)
05016 Huntington disease
114692778 (Grin1)
05017 Spinocerebellar ataxia
114692778 (Grin1)
05020 Prion disease
114692778 (Grin1)
05022 Pathways of neurodegeneration - multiple diseases
114692778 (Grin1)
09165 Substance dependence
05030 Cocaine addiction
114692778 (Grin1)
05031 Amphetamine addiction
114692778 (Grin1)
05033 Nicotine addiction
114692778 (Grin1)
05034 Alcoholism
114692778 (Grin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pleu04040
]
114692778 (Grin1)
Ion channels [BR:
pleu04040
]
Ligand-gated channels
Glutamate (ionotropic)
114692778 (Grin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
114692778
NCBI-ProteinID:
XP_028724565
LinkDB
All DBs
Position
4:14834195..14860458
Genome browser
AA seq
959 aa
AA seq
DB search
MSTMHLLTFALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTALLMEARELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTSTGGGRGALQNQKDTVLPRRAIEREEGQLQLCSRHRES
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcacctgctgacattcgccctgcttttttcctgctccttcgcccgcgcc
gcctgcgaccccaagatcgtcaacatcggcgcggtgctgagcacgcgcaagcacgagcag
atgttccgcgaggccgtgaaccaggccaataagcgacacggctcttggaagatacagctc
aatgccacctctgtcacccacaagcccaacgccatacagatggccctgtcagtgtgtgag
gacctcatctccagccaggtctatgccatcctagttagtcacccgccaacccccaacgac
cacttcacccccacccccgtctcctacacagctggcttctacagaatccccgtcctggga
ctgacgacccgaatgtccatctactctgacaagagcatccacctgagcttcctgcgcacg
gtgccgccctactcccaccagtccagcgtctggtttgagatgatgcgcgtctacaactgg
aaccatatcatcctgctagtcagcgatgaccacgagggccgggcggcgcagaagcgcctg
gagacgttgctggaggagcgtgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgacaacaagcgcggacccaaggccgagaaggtgctgcagtttgaccca
ggaaccaagaatgtgacggctctgctgatggaggcacgggaactggaggccagggtcatc
atcctttctgcaagcgaggacgacgctgccaccgtgtaccgcgcagccgcgatgctgaac
atgacgggctctgggtacgtgtggctggtgggggagcgcgagatctcggggaacgccctg
cgttacgccccagacggcatcatcggactgcagctcatcaacggtaaaaacgagtcagcg
cacatcagcgacgccgtgggcgtggtggcgcaggcagtgcacgagctgctggagaaggag
aacatcaccgacccgccgcggggctgcgtgggcaacaccaacatctggaagacaggaccg
ctgttcaagagggtactgatgtcttccaagtatgcggatggagtgaccggccgtgtggaa
ttcaatgaggatggggaccggaagtttgctaactatagtatcatgaacctgcagaaccga
aagctggtgcaagtgggcatctacaatggcacccatgtcatcccaaatgacaggaagatc
atctggccggggggagagacagagaagcctcgaggataccagatgtccacgagattaaag
atagtgacaatccaccaagagccctttgtgtacgtcaagcccacactgagtgacgggaca
tgtaaagaggagttcacggtcaacggtgaccccgtcaagaaggtgatctgcacaggacct
aatgatacatcgccaggcagcccacgccacacggtgcctcagtgctgctacggcttctgc
atcgacctgctcatcaagttggcacgcaccatgaactttacctatgaggtgcacctggtg
gcagacggcaagtttggcacacaggagcgggtgaacaacagtaacaaaaaggagtggaat
gggatgatgggagagctgctcagtggccaagcggacatgattgtggcaccactgaccatc
aacaacgagcgtgcgcagtacatagagttctccaagcccttcaagtaccagggcctgacc
attctggtcaagaaggagatcccccggagcacactggactcgttcatgcagcccttccag
agcacgctgtggctgctggtggggctgtcggtgcacgtggtggctgtgatgctgtacctg
ctggaccgcttcagtcccttcggccggttcaaagtgaacagtgaggaggaggaggaggat
gcactgaccctgtcctctgccatgtggttctcctggggtgtcctgctcaactctggcatt
ggggaaggtgccccccgaagcttctctgcacggatcctaggcatggtgtgggctggtttt
gccatgatcatcgtggcttcctatactgccaacctggcagcctttctggtgttggaccgg
cctgaggagcgtatcaccggcatcaatgacccgaggctcagaaacccctcagacaagttc
atctatgcaactgtaaagcagagttctgtggacatctacttccggaggcaggtggagttg
agcaccatgtaccggcacatggaaaaacacaactatgagagcgcagcggaggccatccag
gctgtgcgggacaacaagctccatgccttcatctgggactcagcagtgctggagtttgag
gcttcacagaaatgcgacctggtgaccacgggtgagctgttcttccgctcaggctttgga
atcggcatgcgcaaggacagcccctggaagcagaatgtttccctgtccatactcaagtcc
cacgagaatggcttcatggaagatctggataagacgtgggttcggtatcaggagtgtgac
tcccgaagcaacgctcctgcgactctcacatttgagaacatggcaggggtcttcatgctg
gtggctggaggcatcgtggctgggatcttcctgattttcatcgagatcgcctacaagcgg
cacaaggatgcccgtaggaagcagatgcagctggcctttgccgcagtgaacgtgtggagg
aagaacctgcaggatagaaagagtggtagagcagagcccgaccctaaaaagaaagccaca
tttagggctatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaagac
acgagcaccgggggtggacgcggcgctttgcaaaaccaaaaagacacagtgctgccgcga
cgcgctattgagagggaggagggccagctgcagctgtgttcccgtcatagggagagctga
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