Peromyscus leucopus (white-footed mouse): 114692813
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Entry
114692813 CDS
T07241
Symbol
Snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114692813 (Snapc4)
03021 Transcription machinery [BR:
pleu03021
]
114692813 (Snapc4)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
114692813 (Snapc4)
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
114692813 (Snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
114692813
NCBI-ProteinID:
XP_028724650
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All DBs
Position
4:13714363..13733206
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AA seq
1356 aa
AA seq
DB search
MDIDAEREKITQEIQELERILYPGSSSVHLEVSDSSLSSDSEADFLSDEDLETAGAPALE
EGRWSEASNEEEEDPKDKALPEDPETCLQLNMVYQEVIQEKLAEVSQLLAQNQEQQEEIL
YDLAGTKCPKVKDGKSLPSYMYIGHFLKPYFKDKITGVGPPANEDTREKAAQGIKAFEQL
LVTKWKHWEKALLRKSVVSDRLQRLLQPKLLKLEYLREKQSRVSSELEKQALEKQIKEAE
KEIQDINQLPEEVLLGNRLDNHDWEKISNINFEGGRNAEEIQKFWQSSEHPSINKQEWST
EEVERLKAIAATHGHLEWHLIAEELGTSRSAFQCLQKFQQYNKALKRKEWTEEEDHMLTQ
LVQEMRVGSHIPYRKIVYFMEGRDSMQLIYRWTKSLDPNLKRGSWAPEEDAKLLQAVAKY
GAQDWFKIREEVPGRSDAQCRDRYIRRLHFSLKKGRWNAKEEQQLIQLIEKYGVGHWARI
ASELPHRSGSQCLSKWKVLARKKQRLQKRRLRRPRHSRQWSSSSSSDSSSEGYGGGSSSS
SSSSSSSSEDSDMELEESLENGRALVPQPYSVPDIDLWAPTRPITSQSQREGSGCCCPAH
RAVSCTLDATQSQHKEDSTAVSTPEMSQGPVPCETHRTFPRRARFLHLPDTHLANMEDPA
SKHVLRVPLEKTLQLVRTRPATQSHIPVKQGPKQPPLPNSCSESDPGDSVAGPRLRRLWH
GTFQNKWRRKRQALHRRLLKHRLLLAVIPWVGDINLSCTQAPRRPAVVQTQADSIRMQLE
HARLTSTPVFTLLIQLLQIDTAGCMEVVRERKTQPDTQNPQPHLLQASSSAKDSTDCSLP
SMPGQQTAKRDSNKGRLGSCETEDTSFQVPVTAPHGFRPKPKTVSELLREKRLRESRAKK
ATQALAAINSQLLISSPVILQPPPPPAPQGSPVAGPATSSVELSVPVAPVMVSSNSPGSW
QVAGISATDKQPPTLQTIPLNPSHKGTQIVAPAAFRSLALAPRQVPTGCPLSTLGQSQAS
ATSQKQGLPKVLPLLPAAPSPSQLPEQPLSLPPVLGPQASGQPLAAKASLPVNWVLTTQK
LLSVPEPAVVGLPQSVTTPETIGSPAKQPPSPATTPACLGQLPASADTEPKGPQGQEVPP
TSGPKKKALDLSLLSQESGAATLPWLKGCRGAHVPPLGSRIPYQPPSLCSLRTLSSLLFR
KKDLEQKASSLVASQAAGSQSEPKAGALQTSLELVQKQFRDNPAYLLLKTRFLAVFSLPA
LLATLPPHGVPTTLSPAMAVGSESDSEDLGDLELKDRARRLDCLACSTQASPAATDPGQR
APGPGEDSAPSHLDASDDLDVLRTRHARHSRKRKLL
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgacgccgagagagagaagataacacaggagatccaggagctcgaaaggatt
ttgtatcctggatcctccagcgtccatttggaggtctctgactccagtctcagttcggac
tctgaagcagatttcctgtctgatgaggacttggaaacggctggggcccccgccttggaa
gagggaaggtggagtgaggccagcaatgaggaggaggaggaccccaaggacaaagctctt
cctgaagaccctgagacttgtctacagctaaatatggtctaccaggaggtgatccaggag
aagctagcagaggttagccagctgctggcccagaaccaggagcagcaggaggagatcctg
tatgatctggctgggaccaaatgccccaaggtgaaggatggcaaaagcctgccttcatac
atgtacataggccacttcctgaagccatacttcaaggacaagatcactggagtgggacct
ccagccaatgaagacacacgagagaaggctgcccagggaatcaaggcctttgaacagctc
ttggtgaccaagtggaagcactgggagaaagccctgctcaggaagtccgtagtgagtgat
cgcctgcagcgcctacttcagcccaaactgctgaagcttgagtacttacgcgagaagcag
agccgagtctccagcgagctggagaagcaggccctggagaagcagattaaggaggcagag
aaggagattcaggacatcaaccagctcccagaggaagttctgctggggaatcggctggat
aaccacgactgggaaaagatttccaacatcaactttgaaggaggccgcaatgcggaggag
atccagaagttctggcagagttcagagcacccaagcatcaacaagcaagaatggagcaca
gaggaggtggagcggctgaaagccattgctgccacacatggccacttggagtggcatttg
attgcagaggagctagggacaagccgcagcgccttccagtgcctgcagaaatttcagcag
tacaataaagccctgaaacgcaaggagtggacagaagaggaagaccacatgctcacccag
ctggtccaggagatgcgtgttgggagccatattccataccgcaagattgtctacttcatg
gaaggaagagactccatgcaactgatctaccgttggaccaagagcttggaccctaacctg
aaaaggggatcctgggccccagaggaagatgctaaattgcttcaagctgttgccaagtat
ggggcgcaggactggtttaaaatccgggaagaggtgccaggtaggagcgatgcccagtgc
agagaccgctacatcagaagattacatttcagcttgaagaagggacggtggaatgcaaaa
gaagaacaacagctgatccagttaatagaaaagtacggtgttggtcactgggcaagaata
gcttctgaactgccccatcggtcaggctcccagtgtctgagcaagtggaaagtactggcc
aggaagaagcagcgtctccagaagaggaggctgcggaggccccgtcatagtcgccagtgg
agctctagcagcagcagtgacagcagcagtgagggctatggcggcggcagcagcagcagc
agcagcagcagcagcagcagcagtgaagactcggatatggagctggaagagtctctggag
aatggcagagcactggttcctcaaccgtacagcgtgccagacattgacctgtgggcccct
accaggccgatcaccagccagtcacagagagaagggtcagggtgctgctgcccagcacac
cgtgctgtctcctgcactctcgatgccactcaaagtcagcacaaggaagattctaccgct
gtctccactcctgagatgagccaggggccggtgccctgtgagactcacagaacttttcca
agaagggctcggttcctacacttaccagacactcacctagcaaacatggaggacccagcc
agcaagcatgtgctccgagtgcccctagagaaaacgctgcagttggtcaggacccgccca
gccacccagagccacataccggtgaagcaaggaccgaagcagccacccctgcctaattca
tgctcagagtcggacccgggggacagtgtggctgggccccgtctgcggcggctgtggcat
ggaactttccagaataagtggagacgcaagagacaggctctgcaccgcaggcttcttaaa
cacaggcttctgctggcggtgataccctgggtgggtgacatcaacctgtcctgcacacaa
gctcctaggagacctgcagtggtgcagactcaagctgacagcatcaggatgcagttagag
catgcccgcctgaccagcactccagtgttcacattgcttattcagctactgcagattgat
actgcgggctgcatggaggtagttcgagagaggaagacccagcctgacacccagaacccc
caaccacatcttctgcaggcatcctccagtgccaaggacagcacagactgctccctccca
agcatgccgggtcagcaaactgcaaagagagacagcaacaaagggcgtctgggatcctgc
gagactgaggatacctccttccaagttcctgtaacagccccacatggcttccggccaaag
cccaagactgtatctgagcttcttcgtgagaagcggctccgtgagtcccgtgcaaaaaag
gccactcaggccctcgctgccatcaacagccagttgctgatctcctcacctgtgatcctc
cagccccctccgcccccagccccccagggttccccagtggcaggccctgcaacatccagc
gtggaactctctgtccctgtggccccagtgatggtcagttccaattctcctggctcctgg
caggtggctgggatctcagccacagacaagcagccccctaccctgcaaaccattccccta
aacccctcccacaaagggacccagattgtggcccctgctgcttttaggagcctggcccta
gctcccaggcaggtccccacaggctgccctctgagtactctaggacagtctcaggcctct
gccacatcccagaagcagggcctgcccaaggtcctgccccttctcccagcagcccccagc
cctagtcagctgcccgagcagcccctcagtctaccaccagttcttggcccacaggcaagt
ggacagcccctggcagccaaggccagccttcctgtcaactgggtgctcacaactcagaag
ctgctctctgtcccagagccagctgtggtgggcctcccccagtcagtgacgacccctgag
accataggatccccggcaaaacagccaccttcccctgccacgactcctgcttgcctggga
cagcttccagccagtgcagacacagagcccaaaggtcctcagggccaggaagtaccaccc
acatctgggcccaaaaagaaggccttggacctaagtctgctttcccaggagagtggggca
gccacactgccatggctgaaggggtgccgaggtgctcatgtgcccccactggggagcagg
atcccctatcagcccccttcactgtgcagcttgagaacattgtccagcctcctcttccgt
aaaaaggacttggaacagaaggcttcctctctggtcgccagccaggcagctgggtcccaa
tctgagcccaaggctggagccctacaaacttccttggaactggtacagaagcaattccgg
gacaacccagcctacctcctcctaaagacacgtttcctagctgtcttctctctccctgcg
ctcctggccactctgccaccccacggtgtccctactaccctgtcaccagccatggctgtc
ggttctgaaagtgacagtgaagacctgggtgacctggaactcaaggacagggccaggcgg
ttggactgcctggcctgcagcacacaagcaagcccggcagccacagacccgggacagaga
gctccaggtcctggtgaggattctgccccctcccacctggatgcttctgatgaccttgat
gtgctcaggactcggcatgctcggcattcccggaaacggaagctgctatga
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