Peromyscus leucopus (white-footed mouse): 114692821
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Entry
114692821 CDS
T07241
Symbol
Notch1
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu01522
Endocrine resistance
pleu04330
Notch signaling pathway
pleu04658
Th1 and Th2 cell differentiation
pleu04919
Thyroid hormone signaling pathway
pleu05020
Prion disease
pleu05165
Human papillomavirus infection
pleu05200
Pathways in cancer
pleu05206
MicroRNAs in cancer
pleu05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114692821 (Notch1)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
114692821 (Notch1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
114692821 (Notch1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
114692821 (Notch1)
05206 MicroRNAs in cancer
114692821 (Notch1)
09162 Cancer: specific types
05224 Breast cancer
114692821 (Notch1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
114692821 (Notch1)
09164 Neurodegenerative disease
05020 Prion disease
114692821 (Notch1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
114692821 (Notch1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
NOD
Notch
NODP
Ank_4
Ank_5
Ank_3
EGF_3
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
114692821
NCBI-ProteinID:
XP_028724671
LinkDB
All DBs
Position
4:13587669..13633612
Genome browser
AA seq
2532 aa
AA seq
DB search
MPRLLAPLLCLTLLPALAARGLRCSQPSGTCLNGGRCEVANGTEACVCSGAFVGQRCQDP
NPCLSTPCKNAGTCHVVDRGGTVDYACSCPLGFSGPLCLTPLDNACLANPCRNGGTCDLL
TLTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCLPFESSYICGCPSGFHGPTCRQDVN
ECSQNPGLCLHGGTCHNEVGSYRCACRATHTGTRCESLYVPCNPSPCQNGGTCRPTGDTT
HECACLPGFAGQNCEENVDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNTHGGYNCVCVNGWTGEDCSENIDDCASAACFQGATCHDRVASFYCE
CPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECALGA
NPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGHCVDKINEFLCQCPKGFSGHLCQYDVDECASTPCKNG
AKCLDGPNTYTCVCSEGYTGTHCEVDIDECDPDPCHYGSCKDGVATFTCLCQPGYTGHHC
ETNINECHSQPCRHGGTCQDRDNSYLCLCLKGTTGPNCEINLDDCASNPCDSGTCLDKID
GYECACEPGYTGSMCNVNIDECAGSPCHNGGTCEDGIAGFTCRCPEGYHDPTCLSEVNEC
NSNPCIHGACRDGLNGYKCDCAPGWSGTNCDINNNECESNPCVNGGTCKDMTSGYVCTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCPLPYTGATCEVVLAPCATSPCKN
SGVCKESEDYESFSCVCPTGWQGQTCEIDVNECVKSPCRHGASCQNTNGTYRCLCQAGYT
GRNCESNIDDCRPNPCHNGGSCTDGINMAFCDCLPGFQGAFCEEDINECASNPCRNGANC
TDCVDSYTCTCPAGFNGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQY
DVNECDSRPCLHGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSAPCKNGGKCWQTNTQ
YHCECRSGWTGFNCDVLSVSCEVAAQKRGIDVTLLCQHGGLCVNKEDKHYCHCQAGYTGS
YCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPCQNGGTCID
LTNTYKCSCPRGTQGVHCEINVDDCHPHLDPASRSPKCFNNGTCVDQVGGYSCTCPPGFV
GERCEGDVNECLSNPCDPRGTQDCVQRVNDFHCECRAGHTGRRCESVINGCRGKPCKNGG
VCAVASNTARGFICRCPAGFEGATCENDARACGSLRCLNGGTCISGPRSPTCLCLAAFTG
PECQFPASSPCVGGNPCYNQGTCEPTSESPFYRCLCPAKFNGLLCHILDYSFAGGAGRDI
PPPQIEEACELPECQEDAGNKVCSLQCNNHACGWDGGDCSLNFNDPWKNCTQSLQCWKYF
SDGHCDSQCNSAGCLFDGFDCQRAEGQCNPLYDQYCKDHFSDGHCDQGCNSAECEWDGLD
CAEHVPERLAAGTLVLVVLLPPEQLRNNSFHFLRELSHVLHTNVVFKRDAQGQQMIFPYY
GREEELRKHPIKRSAAGWTTSSLLPGTGAGRQRRELDPMDIRGSIVYLEIDNRQCVQSYS
QCFQSATDVAAFLGALASLGSLNIPYKIEAVKSETVEPPLPPQLHLMYVAAAAFVLLCFV
GCGVLLSRKRRRQHGQLWFPEGFKVSEASKKKRREPLGEDSVGLKPLKNASDGALMDDNQ
NEWGDEDLETKKFRFEEPVVLPDLDDQTDHRQWTQQHLDAADLRMSAMAPTPPQGEVDAD
CMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGET
ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILLRNRATDLDA
RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN
GANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV
RLLDEYNLVRSPQLHGTALGGTPTLSPTLCSPNGYLGNLKSATQGKKARKPSTKGLACGS
KEAKDLKARRKKSQDGKGCLLDSSSMLSPVDSLESPHGYLSDVASPPLLPSPFQQSPSMP
LSHLPGMPDTHLGISHLNVAAKPEMAALAGSSRLAFEPQPPRLSHLPVASSASTVLSTNG
TGAMNFTVGAPASLNGQCEWLPRLQNGMVPSQYNPLRPGVASGTLSTQAAGLQHGMMGPL
HNSLSTNTLSPMIYQGLPNTRLATQPHLVQTQQVQPQNLQIQPQNLQPPSQPHLSVSSAA
NGHLGRSFLSGEHSQAADVQPLGPSGLPVHTICPXESQALPTSLPSSMVPPMTTTQFLTP
PSQHSYSSSPVDNTPSHQLQVPEHPFLTPSPESPDQWSSSSPHXNISDWSEGISSRPTSM
PSQITHIPEAFK
NT seq
7599 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggcttctggcgcccttgctctgcctaactctgctgcccgcgctcgccgcaaga
ggcttgagatgctcccagccaagtgggacctgcctgaatggagggaggtgcgaagtggcc
aacggcaccgaagcctgtgtctgcagcggggccttcgtgggccagcggtgccaggacccc
aatccgtgcctgagcacaccctgcaagaatgctggaacatgccatgtggtggaccgcggt
ggcactgtggattatgcctgcagctgtcccctaggtttctctgggcccctctgcctgaca
cctctggacaatgcctgcctagccaacccctgccgcaatggaggcacctgtgacctgctc
acccttacagaatacaagtgccgctgccccccgggatggtcaggaaagtcatgtcagcaa
gccgacccgtgtgcctccaacccctgtgccaatggtggccagtgcctgccctttgagtct
tcgtacatctgtggctgcccttccggcttccacggccccacctgcaggcaggacgtcaac
gagtgcagccagaacccggggctgtgcctccacggaggcacctgccacaacgaggtcggc
tcctaccgctgtgcctgccgcgccacccacaccggtacccgctgcgagtcgctctacgtg
ccctgcaacccctcaccctgccagaacgggggcacctgccgccctacgggagacaccacc
cacgagtgcgcctgcctgccaggctttgctggccagaactgtgaagaaaatgtggatgac
tgtccaggaaacaattgcaagaatgggggtgcctgtgtggatggcgtgaatacctataat
tgccgctgcccaccggagtggacgggtcagtactgcacagaggatgtggatgagtgtcag
ctcatgcccaacgcctgccagaatggtggaacctgccacaacacccatggcggctacaac
tgtgtgtgcgtcaatggctggactggcgaggactgcagtgagaacattgacgactgcgcc
agtgctgcctgcttccagggcgccacctgccatgaccgcgtggcctccttctactgcgag
tgtccgcacgggcgcacgggtctactgtgccacctcaacgatgcatgcatcagcaacccc
tgcaacgagggctccaactgcgacaccaatcctgtcaacggcaaggccatctgcacttgc
ccctctgggtacacgggtccagcctgcagccaggacgtggatgaatgtgctctgggtgcc
aacccctgtgagcatgcgggcaagtgcctcaacacactgggctcctttgagtgccagtgt
ctacagggctacacagggccccgctgtgagattgatgtcaatgagtgcatctccaacccg
tgtcagaatgatgccacctgcctggaccagatcggggagttccagtgtatatgtatgcca
ggttacgagggcgtgtactgtgagatcaacacagacgagtgtgccagcagcccctgcctg
cacaatggccactgcgtggacaagatcaacgagttcctgtgtcagtgccccaaaggcttc
agcgggcacctgtgccagtatgatgtggatgagtgtgccagcacaccatgcaagaatggt
gccaagtgcctggatgggcccaacacctacacctgcgtgtgctcagaaggttacacaggg
acccactgcgaggtggacatcgatgagtgtgaccctgacccctgccactatggttcctgc
aaggatggcgtggccacctttacctgcctctgccagccgggctacacaggccatcactgt
gaaaccaacattaacgaatgccacagccagccgtgccgccacgggggcacctgccaggac
cgtgacaactcctacctctgcttatgcctcaagggaaccacaggacccaactgtgagatc
aacttggatgactgtgccagcaacccctgcgactcgggcacgtgtctggacaagattgac
ggctacgagtgtgcctgcgagccgggctacacagggagcatgtgcaacgtcaacattgat
gagtgtgcaggcagcccctgccacaatgggggtacctgtgaggatggcattgcgggcttc
acctgccgctgccccgagggctaccatgaccccacgtgcctgtccgaggtcaacgagtgc
aacagtaacccctgcatccacggggcttgccgggatggtctcaacgggtacaaatgtgac
tgtgcccctgggtggagcggcacaaactgtgacatcaacaacaacgagtgtgagtcgaac
ccttgtgtcaatggcggcacctgcaaagacatgaccagtggctacgtgtgcacctgccga
gaaggcttcagcggccctaactgccagaccaatatcaatgagtgtgcctccaacccctgc
ctgaaccaggggacctgcattgatgatgtcgccgggtacaagtgcaattgccctctgccc
tacacaggagccacgtgtgaggtggtgttggcgccatgtgcaaccagcccctgcaaaaac
agtggggtgtgcaaggagtctgaggactacgagagcttttcctgtgtctgtcccacaggc
tggcagggtcagacctgcgagatcgacgtcaatgagtgtgtgaagagcccgtgccgccac
ggtgcctcctgccagaacaccaacggcacctaccgctgcctctgccaggctggctacaca
ggtcgtaactgtgagagtaacatcgatgactgccggcccaacccttgtcacaatgggggt
tcctgcaccgatggcatcaacatggccttctgcgactgcttgccgggcttccagggtgcc
ttctgtgaggaggacatcaatgaatgtgccagtaatccctgccggaacggtgccaactgc
accgattgtgtggacagctacacgtgcacctgccctgcaggcttcaacggcatccactgt
gagaataacacacctgactgtaccgagagctcctgcttcaatggtggcacctgtgtggat
ggcatcaactctttcacctgtctatgtccacctggcttcacgggcagctactgccagtac
gatgtcaatgagtgtgactcacggccctgtctgcacggtggcacctgccaagacagctat
ggtacctacaagtgcacctgcccacagggctacactggcctcaactgccagaacctcgtg
cgctggtgcgactcagctccctgcaagaacggtggcaagtgctggcagaccaacacgcag
taccactgtgagtgccgtagcggctggactggcttcaactgcgatgtgctcagcgtctcc
tgtgaggtggccgcacagaaacgaggcatcgatgtcaccctcctgtgccagcatggaggc
ctctgcgtgaacaaggaagacaagcactactgtcactgccaggcaggctacacgggcagc
tactgcgaggacgaggtggacgagtgctcaccgaacccgtgccagaacggagccacctgc
accgactacctgggtggcttttcctgcaagtgtgtggctggctatcacggatctaactgt
tctgaggagatcaatgagtgcctctcccagccctgccaaaatgggggcacctgcatcgat
ctgaccaacacctacaagtgctcctgccccaggggtacacagggtgtgcactgtgagatc
aacgttgacgactgccatccccaccttgaccctgcctcccgaagccccaagtgcttcaac
aatggcacctgtgtggaccaagtgggtggctacagctgcacctgcccgccaggcttcgtc
ggggagcggtgtgagggcgatgtcaatgagtgtctctccaacccctgtgacccacgtggc
acccaggactgcgtgcagcgcgttaatgatttccactgcgagtgccgggctggccacact
ggacgccgctgtgagtcagtcatcaacggctgcaggggcaaaccatgcaagaacgggggc
gtctgtgccgtggcctccaacacggcccgcggattcatctgcaggtgccctgcgggcttt
gagggcgccacgtgtgagaacgatgcccgcgcctgtggcagcttgcgctgcctcaatggt
ggcacgtgtatctcaggcccacgcagtcccacctgcctgtgcctggccgccttcactggc
cctgagtgccagttcccagccagcagcccctgtgtgggtggcaacccctgctacaaccag
ggcacctgtgagcccacatccgagagccctttctaccgctgcctgtgccctgccaagttc
aacgggctgctgtgccacatcctggactacagcttcgcaggtggtgctgggcgcgacatc
cccccgccgcagatcgaggaggcctgcgagctgcctgagtgccaggaggatgcaggcaac
aaggtctgcagtctgcagtgcaataatcacgcctgcggctgggatggcggtgactgctcc
ctcaacttcaacgacccttggaagaactgcacgcagtccctgcagtgctggaagtatttc
agcgacggccactgtgacagccagtgcaactcagccggctgcctctttgacggcttcgac
tgccagcgcgccgagggccagtgcaaccccctgtatgaccagtattgcaaggaccacttc
agtgacggccactgcgaccagggctgcaacagcgccgagtgtgagtgggatggcctagac
tgcgcggagcacgtgcccgagcggctggcggccggcacgttggtgttggtggtgctgctc
ccacctgagcagctgcggaacaactccttccacttcctgcgggagctcagccacgtgctg
cacaccaacgtggtcttcaagcgggatgcgcagggccagcagatgatcttcccctactat
ggccgcgaggaggagctgcgcaagcaccccatcaagcgctccgcagcgggctggaccacc
tcgtcgctgcttcccggcaccggtgcggggcgccagcgcagggagctggaccccatggac
atccgaggctccattgtctacctggagattgacaaccggcagtgtgtacagtcatactca
cagtgtttccagagtgccaccgacgtggctgccttcctgggcgcgcttgcttcacttggc
agcctcaacatcccctacaagatcgaggccgtaaagagtgagacggtggagcctccgctg
cccccgcagctgcacctcatgtacgtggcagcggctgccttcgtgctcctgtgctttgtg
ggctgcggggtactcctgtcccgcaagcgccggcggcagcatggccagctctggttcccc
gagggcttcaaagtgtcagaggccagcaagaagaagcggagagagcccctcggcgaggac
tctgtcggcctcaagcccctgaagaatgcctcagatggtgccctgatggacgacaatcag
aacgagtggggggacgaagacctggagaccaagaagttccggtttgaggagccagtggtt
cttcctgacctagacgatcagactgaccacaggcagtggacccagcagcacctggatgct
gctgacctgcgcatgtctgccatggccccaacaccgcctcagggtgaggtggatgctgac
tgcatggatgtcaatgtccgaggaccagatggcttcacacccctcatgatcgcctcctgc
agtggaggaggcctcgagacaggcaacagtgaagaagaagaagatgcgcctgctgtcatc
tccgacttcatctaccagggcgccagtttgcacaaccagacggaccgcacaggagagact
gccctgcacctggctgccagatactctcgttcagatgctgccaagcgcttgctggaggcc
agtgcagatgccaacatccaggacaacatggggcgcaccccattgcatgcagctgtttct
gcagatgctcagggtgtctttcagatcctgctccggaaccgagccacagacctggatgcc
cgcatgcatgacggcacaaccccactgatcctggctgcacgcctggccgtggagggcatg
ctggaggacctcatcaactcgcatgcagacgtcaatgccgtggatgacctaggcaagtcg
gccttgcactgggcagcggcagtgaacaatgtggatgctgcagttgtgctcctgaagaat
ggcgccaacaaagacatgcagaacaacaaggaggagacgcccctgttcctggcggcccgt
gagggcagctatgagactgccaaagtgctgctggaccactttgccaaccgggacatcaca
gaccacatggaccgactgccacgggacattgctcaggagcgcatgcaccacgatatcgtg
cggctgctggatgagtacaacctggtgcgcagcccgcagctgcatggcactgccctgggt
ggcacgcccaccctctctcccacactctgctcgcccaatggctacctgggcaacctcaag
tctgccacacaaggcaaaaaggctcgcaagcccagcaccaaagggctggcctgtggcagc
aaggaagctaaggacctcaaagcacggaggaagaagtcccaggatggcaagggctgcctg
ttggacagctccagcatgctgtcgcctgtggactcccttgagtcacctcacggctacttg
tcagacgtggcctcaccaccccttctcccctccccattccagcagtctccatccatgcct
ctcagccacctgcctggtatgcctgacacccacctgggcatcagccacttgaatgtggca
gccaagcctgagatggcagcactggccggaagcagccggctggcctttgagccacagccc
ccacgcctctcccacctgcctgtagcctccagtgccagcacagtgctgagtaccaatggc
acaggggctatgaatttcaccgtgggtgcgcctgcaagcttgaatggccagtgtgagtgg
ctcccccgactgcagaacggcatggtgcccagccagtacaacccgctacggccaggtgtg
gcatcgggcaccctgagcacacaggcagctggcctccagcatggcatgatgggcccacta
cacaacagtctctccaccaataccttgtccccaatgatctaccagggcttgcccaacaca
cggctggctacgcagcctcatctggtgcagacccagcaggtgcagccacagaacttacaa
atccagcctcagaatctgcagccaccatcacagccacacctcagtgtgagctcagcagcc
aatgggcacctgggccggagcttcctgagcggggagcacagccaggcggcggatgtacag
ccactgggccccagcggtctgcctgtgcacaccatctgcccannggagagccaggccctg
cccacatcactgccatcctcgatggtcccgcccatgaccactacccaattcctgacccct
ccttcccagcacagctactcatcctcacctgtggacaacacccccagccaccagctgcag
gtgccagagcaccccttcctcaccccatcccccgagtcccctgaccagtggtccagctcc
tccccgcatntcaacatctctgattggtccgagggcatctccagccggcccaccagcatg
ccgtcccagatcacccacattccagaggcatttaagtaa
DBGET
integrated database retrieval system
