Peromyscus leucopus (white-footed mouse): 114693056
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Entry
114693056 CDS
T07241
Symbol
Cntn1
Name
(RefSeq) contactin-1 isoform X1
KO
K06759
contactin 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114693056 (Cntn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pleu04515
]
114693056 (Cntn1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pleu00537
]
114693056 (Cntn1)
Cell adhesion molecules [BR:
pleu04515
]
Immunoglobulin superfamily
Contactins
114693056 (Cntn1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pleu00537
]
Others
114693056 (Cntn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Sp38
C2-set_2
Big_3_4
Motif
Other DBs
NCBI-GeneID:
114693056
NCBI-ProteinID:
XP_028725094
LinkDB
All DBs
Position
20:complement(11895030..12210837)
Genome browser
AA seq
1020 aa
AA seq
DB search
MKMPLLASHLLLISIMTCLGEFTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESLEGK
VSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGVYYCLASNNY
GMVRSTEATLSFGYLDPFPPEERPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVF
ITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPY
PADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNI
QLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCIATGKPIP
TIRWLKNGYAYHKGELRLYDVTFDNAGMYQCIAENAYGSIYANAELKILALAPTFEMNPM
KKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGG
VYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASFDPSLDLTFVW
SFNGYVLDFNKENTNIHYQRNYMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADL
VVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPI
IEGNMEAAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGG
SNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMTPST
AFQVKVKAFNNKGDGPYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVE
SYQIRYWAAHDKEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPSSDVIEA
FTRKAPPSQPPRILSSVRSGSHYIITWDHVVALSNESTVTGYKILYRPDGQHDGKLFSTH
KHSIEVPIPKDGEYVVEVRAHSDGGDGVVSQVKISGVSMLSSSLLSLLLPSLGFLVYMEF
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgccattgctggccagccatctcctgctaatctccattatgacctgtctagga
gagttcacatggcacagaagatatggtcatggagtttctgaggaggacaaaggatttgga
cccatttttgaagagcaaccaatcaataccatttacccggaggagtcactagaaggaaaa
gtttcactcaactgccgggcacgagccagcccatttccagtttacaaatggagaatgaat
aatggggatgttgacctgacaaatgatcggtacagtatggtgggaggaaaccttgtcatc
aacaaccctgacaagcagaaagatgctggtgtatactactgcttggcgtcaaataactat
gggatggtccgaagcacggaagcgaccctgagctttggatatctcgacccctttcctcct
gaggagcgtccagaggtgaaagtgaaggagggtaaaggcatggtgcttctctgcgatcct
ccctaccacttcccagatgatcttagctaccgctggctcctgaatgaatttcctgtattt
atcacaatggataaacgaagatttgtgtctcagacgaatggcaatctctacattgccaac
gttgagtcttctgatagaggcaactactcctgctttgtgtccagtccttctattacaaaa
agtgtgttcagcaaatttatccctctcattccaatacctgaacgaacaacaaagccatat
cctgctgatattgtagtgcagttcaaggacatatataccatgatgggccaaaatgtgact
ttagagtgttttgctcttggaaaccctgttcctgatatccgatggcggaaggtgctagaa
ccaatgcctagcacggctgagataagcacctcaggggctgtcctcaagatcttcaacatc
cagttagaagatgaaggcatctatgaatgtgaggctgagaacattagaggaaaggacaaa
caccaggcaagaatttatgtgcaagcatttcctgaatgggtagagcatatcaatgacact
gaggtggacataggcagtgacctctactggccttgtatagccacagggaagcccatccca
accatcagatggctgaaaaatggatatgcgtatcacaaaggggaactgagactgtatgac
gtgaccttcgataatgctgggatgtaccagtgcatagcagaaaacgcgtatggatccatt
tacgcaaacgccgagctcaagatcctggctttagctccaacttttgaaatgaatcctatg
aagaaaaagatcttggctgctaaaggaggaagagttatcattgaatgtaaacccaaggct
gcacccaaacccaagttttcatggagcaaagggacggagtggcttgtcaacagcagcaga
atacttatatgggaagatggtagcttggaaatcaataatattacaaggaatgatggagga
gtctacacgtgctttgcagaaaataatagggggaaagctaatagcactgggactctggtg
atcacaaatcccacacgaatcattttggcccccattaatgctgatatcactgttggagaa
aatgctacaatgcaatgtgctgcgtcctttgacccgtccttggatctcacgtttgtttgg
tccttcaatggctacgtgttagattttaacaaagaaaacacaaatatccattaccagagg
aattatatgctcgatgccaatggggaactgctcatccgaaatgcccagctgaagcatgca
ggaagatacacgtgcacggcgcagaccatcgtggacaattcttcagcttcggctgacctt
gttgtccgaggccccccaggccctccaggtggcctgagaatagaagacatcagagctacc
tctgtggcactgacttggagccgtggttcagacaatcacagtcctatctctaaatacact
atccagaccaagactattctctcagatgactggaaagatgcaaagacagatcccccgatc
attgaaggaaacatggaggcagcaaaagcggtggatttgatcccatggatggagtatgaa
tttcgggtggtagcgaccaatacgttaggtacaggagaacccagtataccctcgaacagg
atcaaaacagatggcgctgcaccaaatgtggctccctcagatgtaggaggtgggggtgga
agcaaccgagagctgacaataacgtgggcgcctttgtcaagagaataccattatggtaac
aattttggttacatagtggcgtttaagccatttgatggagaagagtggaagaaagtgaca
gtaactaacccagacactggccgctatgtccacaaagacgaaaccatgaccccttccact
gcgtttcaagtgaaagtgaaggcattcaacaacaaaggagatggaccctatagcctcatc
gctgtcatcaactcagcacaggacgctcccagcgaagcccccacagaagtaggagtgaaa
gtcctatcatcttcagagatatctgttcattggaagcatgttttagagaaaatcgtggaa
agctatcagattcggtactgggctgcgcatgacaaagaagcagctgcccatcgagtccaa
gtcaccagccaggagtattcagccaggttagagaaccttctgcccgacacccagtacttc
atcgaagtgggagcctgcaacagtgccgggtgtggcccttcaagcgacgtgatcgaggcc
ttcaccagaaaagcccctcccagccagccaccaaggatcctcagttctgtgaggtctggc
tcccactatataatcacatgggatcatgttgttgccctctcaaatgaatctacggtgaca
ggatacaagatactctatagacctgatgggcagcatgatggcaagttgttctcaacccat
aaacactccatagaagtcccaatccccaaagacggagagtatgttgttgaggttcgagca
cacagtgatgggggagatggagtagtgtctcaagttaaaatttcaggtgtgtccatgctg
tcttcaagtctcctcagcttgctactgccctcccttggcttcctagtctacatggaattc
tga
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