Peromyscus leucopus (white-footed mouse): 114693142
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Entry
114693142 CDS
T07241
Symbol
Ntn1
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
114693142 (Ntn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pleu00536
]
114693142 (Ntn1)
Glycosaminoglycan binding proteins [BR:
pleu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
114693142 (Ntn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
114693142
NCBI-ProteinID:
XP_028725223
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All DBs
Position
8b:complement(51090904..51292114)
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AA seq
604 aa
AA seq
DB search
MMRAVWEALAALAAVACLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAF
GKDVRVSSTCGRPPARYCVVSERGEERLRSCHLCNSSDPKKAHPPAFLTDLNNPHNLTCW
QSENYLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQ
CRKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQD
WVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDD
SLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLS
GRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKTCNQTT
GQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASK
GKLKMNMKKYCRKDYAVQIHILKADKAGDWWKFTVNIISVYKQGTSRIRRGDQSLWIRSR
DIACKCPKIKPLKKYLLLGNAEDSPDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGK
CKKA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcgctgtgtgggaggcgctggcggcgctggccgcggtggcgtgcctggtgggc
gcggtgcgcggcgggcccgggctcagcatgttcgccggccaggcggcgcagccggatccc
tgctcggatgagaacggccacccgcgccgctgcatcccggactttgtcaacgcggccttc
ggcaaggacgtgcgcgtgtccagcacctgcggccggcccccggcgcgctactgcgtggtg
agcgagcgtggcgaggagcggctgcgctcgtgccacctctgcaactcgtccgaccccaag
aaagcgcacccgcctgccttcctcaccgacctcaacaacccgcacaatctgacgtgctgg
cagtccgagaactacctgcagttcccgcacaacgtgacgctaacgctgtcgctcggcaag
aagtttgaggtgacctacgtgagcctgcagttctgctcgccgcggccggagtccatggcc
atctacaagtccatggactatgggcgcacgtgggtgcccttccagttctattccacgcag
tgccggaagatgtacaaccggccgcaccgcgcgcccatcaccaagcagaacgagcaggag
gccgtgtgcaccgactcgcacaccgacatgcgcccgctctccggcggcctgatcgccttc
agcacgctggacgggcggccctcggcgcacgacttcgacaactcgccggtgctgcaggac
tgggtcacggccaccgacatccgcgtggccttcagccgcctgcacacgtttggcgacgag
aacgaagatgactcggagctggcgcgcgactcctatttctatgcagtgtctgacctgcag
gttggcggccgctgcaagtgcaacggccacgcggcgcgttgcgtgcgcgaccgagacgac
agtctggtgtgtgactgcaggcacaacacagccggccccgaatgcgaccgttgcaagccc
ttccactacgaccggccctggcagcgcgccacggcccgcgaggccaacgagtgcgtggcc
tgcaactgcaacctccatgctcggcgctgcagattcaatatggagctctacaagctgtcg
gggcgcaagagcgggggtgtctgtctcaactgccgccacaacactgcaggccgccactgc
cactactgcaaggagggcttctaccgagacatgggcaagcccatcacccaccgcaaggct
tgcaaagcctgtgattgccaccctgtgggagctgccggcaagacctgcaatcagaccact
ggccagtgtccctgcaaggacggcgtgacgggcatcacctgcaaccgctgtgccaagggc
taccagcaaagccgctctcccatcgccccctgcatcaagattcctgtagcaccacccacc
accgcagccagcagtgtggaggaacctgaagactgtgactcctattgcaaggcctccaaa
gggaagttgaagatgaacatgaagaaatactgtaggaaggactacgctgtccagatccac
atcctgaaggcggacaaagccggggattggtggaagttcacggtgaacatcatctccgtg
tacaagcagggaacaagtcgcattcgccgtggtgaccagagcttgtggatccgctcacga
gacatcgcgtgcaagtgccccaaaatcaagcccctcaagaagtacctgctgctgggcaat
gcggaggactcgcctgaccagagtggcatcgtggcagacaagagcagtctggtgatccag
tggcgggacacgtgggcacggcggctgcgcaagttccagcagcgggagaagaagggcaag
tgcaagaaggcctag
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