Peromyscus leucopus (white-footed mouse): 114693440
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Entry
114693440 CDS
T07241
Symbol
Vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114693440 (Vps50)
Membrane trafficking [BR:
pleu04131
]
Protein recycling
Others
EARP complex
114693440 (Vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
114693440
NCBI-ProteinID:
XP_028725622
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Position
3:complement(22487467..22594070)
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AA seq
965 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAFESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADPFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKYFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSEEETASASE
GSHVLSAEETNFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIV
SRLMQVGEEFCGSKSEVLQESIRKQSINYFKNHHRIRLDELRMFLENETWELCPVKSNFS
ILQLHEFKFLEQSRSPSVSPSKQPLATSSKPVTLFEQYCSGGNPFEIQANHKDEETEDVL
ASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDVPVKSVSRETLKSRKKSDYSL
NKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDS
LESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLNQLVILTS
GDTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELRKP
IYWIVAGKAIDYEQMLLLMTNVKWDVKEIMSQHNIYVDALLKEFEQFNKRLNEVSKRVRI
PLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPD
KEFVETYIKAYYLTENDMERWIREHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDV
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctctaatgacccggcagggtctgaaaagccctccggagagcctc
agtgatcttggtgcctttgagagtcttcgggtccctggaaaggaggaattcagggagctt
cgagaacagccgagcgaccctcaagctgaacaagagctaattaatagtatcgagcaagtc
tatttttctgcggacccatttgatattgttaaatatgagctggagaagcttccacctgtt
ctcaatctgcaagaattggaggaatacagagacaaattaaagcaacaacaagctgcagtc
tctaaaaaagtagcagatttgattcttgaaaaacagcctgcttatgtaaaggagcttgaa
agagtgacttcgttgcagacaggtcttcagctggctgctgttatctgcacaaatgggagg
agacacttgaatattgcgaaggaaggttttactcaggccagcttgggccttcttgcaaat
caaaggaagcgccagttgctgattggacttctgaagtcgttgagaaccatcaaaacgctg
caaagaactgatgtacgcctaagtgaaatgctagaggaggaggactacccaggagcgatt
cagctgtgcctggagtgtcagaaggctgccagtactttcaaacactatagctgcataagt
gagctgaattcaaagctgcaggatactttggaacaaattgaggaacaattggatgtagct
ctttccaaaatctgcaagtattttgacattaatcattataccaaggttcagcaagcttat
cgacttcttggaaaaacacagactgcaatggatcaacttcatatgcacttcactcaagcc
attcacaacactgtgtttcaagttgtgcttggctatgtggagctgtgtgcaggaaacaca
gatacaaagttccagaagctgcaatataaagatctctgtacgcatgtaacaccagacagc
tatattccatgcctggcggacctgtgcaaagcactgtgggaagtgatgctcagctattac
aggacaatggagtggcacgagaagcatgacagtgaggaggagacagcttcagcctctgaa
ggaagtcatgtgttgagtgctgaagagaccaactttgatcgtggctatgtaaaaaagaag
ctggagcatggcctcacgcgaatatggcaggatgttcaactaaaagtaaaaacctacttg
cttggaactgatttatctatattcaaatatgatgattttatctttgttttggatatagtc
agcaggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaggag
tccattagaaaacaaagtatcaattatttcaagaaccaccacagaatacgacttgatgaa
ctgagaatgtttttagagaatgagacgtgggagctttgccctgttaagtcaaatttcagc
atcttgcagcttcatgaatttaaattcctggaacagtctcgctccccatcagtttcaccg
agtaagcagccattggcaacttcttcaaaacctgtgactttgtttgagcagtattgtagt
ggtgggaatccatttgaaattcaagccaaccacaaagatgaagaaacagaagatgtcttg
gcttctaatgggtatgagtctgatgagcaggagaagagtgcctatcaggagtatgacagc
gacagtgatgttcctgaagagctgaagcgggattatgtggatgagcagacaggcgatgtg
cctgtgaagagtgtttcacgagagacccttaagagcaggaagaaatcagattacagtcta
aataaagtgaacgcgcccatcttaacaaacacaacattgaatgtaataagacttgttggg
aagtacatgcagatgatgaacattcttaagccaatcgcctttgatgttatccattttatg
tcccagctgtttgattattacttgtatgcaatatataccttttttggtcggaatgattca
ttggaatccacaggacttggcctcagtagtagcagactaagaacaacactcaacagaata
caagaaagccttattgacctggaggtttcagctgatcctactgccacgctcacagcagca
gaagaaagaaaggagaaggtacccagcccacacctcaatcaactagtgattttgacatct
ggggatacattatatgggttggcagagagagtggtagccacagaatccttggtgtttctg
gctgaacagtttgagttccttcagccacatctggatgctgtgatgcctgcagccaaaaag
ccctttctgcagcaattttactctcagacagtctcaactgccagtgaactccgcaaaccc
atttactggattgtggctggtaaagctattgattatgaacagatgctgctcctgatgact
aacgtgaaatgggatgtcaaagagatcatgtcccagcacaacatatatgtagatgcattg
ctgaaggaatttgagcagtttaacaagcggttaaatgaagtttctaagagagttcggata
cccttgcctgtgtcaaatatactttgggaacattgtatacgattagctaacagaactatt
gtggaaggatacgccaatgtcaagaagtgcagtaatgagggtcgtgccttgatgcaattg
gattttcaacagtttttaatgaagcttgaaaaactaactgatattagacccattcctgat
aaagaatttgtggaaacatatatcaaagcctactacctaactgagaatgacatggagcgc
tggatcagagaacacagggaatattcaacgaagcagctgaccaacctggtgaatgtttgc
ctgggatctcatatcaataagaaagcaagacaaaagctcctagcagccatagatgatgtg
gacagacctaaaagataa
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