Peromyscus leucopus (white-footed mouse): 114693565
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Entry
114693565 CDS
T07241
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-4(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04151
PI3K-Akt signaling pathway
pleu04510
Focal adhesion
pleu04512
ECM-receptor interaction
pleu04820
Cytoskeleton in muscle cells
pleu04974
Protein digestion and absorption
pleu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
114693565
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114693565
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114693565
09142 Cell motility
04820 Cytoskeleton in muscle cells
114693565
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
114693565
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
114693565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pleu04147
]
114693565
00536 Glycosaminoglycan binding proteins [BR:
pleu00536
]
114693565
Exosome [BR:
pleu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114693565
Glycosaminoglycan binding proteins [BR:
pleu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114693565
Hyaluronan
Extracellular matrix or blood plasma proteins
114693565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
VWA_CoxE
vWA_SIBA-E
SRPRB
Motif
Other DBs
NCBI-GeneID:
114693565
NCBI-ProteinID:
XP_037063789
LinkDB
All DBs
Position
7:complement(94740852..94858030)
Genome browser
AA seq
2308 aa
AA seq
DB search
MGTWKTFWLIISLAASLGLIKSQMIVCREASKGDIVFLVHTSINPQQARSVRKFLYTLAN
SFNVSKDTIRVSLAQHSDTPASEFLLSTYHRKGDVLRHIQQLQFKPEGNKMGQALQFILE
HHFQEEAGSRANQGVPQMALVMSSGPAEDNIREPAEALRRAGILLYAVGVGDAAQAELRE
ISSIPKDKFTFFVPNFSSLPGLAQKLRQELCSTLARAAQPTGHRSPVCPEASLADIVFLL
DSSTSIGPQNFQKVKNFLHSVVLGLDISNDQVQVGLVQYSDNIHPAFQLKQSSLKSMVLE
WIRNLSYSTGGTNTGSALEYIRANYLTEMSGSRAKDGVPQIVILVTDGESNDEVQDAADQ
LKRDGVFVYVVGINVQDVQELQKIASEPFEKFLFNTENFSILEEFSGSLLQALCSTVERE
MKKSTKTYADVVFLIDTSQETSQASFQWMQNFISGIIGMLEVGKDKYQIGLAQYGDQGYT
EFLFNTYKTRNEMITHIHEHLVLRGGSRRTGRALQFLHQTFFQEAAGSRIFQGVPQYAVV
FTSGKSEGEVRDAAQILRKRGVNIISVGVQDSDRMELEGIGSPVFVADLQGEDRVRQLLQ
DVNVVIQGTQQPDVRIEAADGAAGACPTAVPADLVFLVEEFSRARQSNFQQVVHFLKTTV
QSLNIDPHAVRISLVFYSEEPQLEFSLDTYQNAAQILQHLDKLTFHGRRGRTKAGSALDF
LRNEVFISEKGSRSNQGVQQIAVVIMESPSVDNVSTPASHLRRAGVTIYAVGIQPASESK
DLEKISTYPPWKHAIRLESFLQLVIVENKLKNRLCPETVSRIYPQRSFTLERAQEDCVHV
EKADIYFLIDGSGSIRPIDFIEMKAFMKAVIRMFHVGPDRVRFGVVQYSDKIISQFFLSQ
YASMAELRTAIDDIQQGGGGTTTGEALSRMALVFEDTARTSVARYLIVITDGQSSDPVAE
AAQGLRDMGVDVYAIGVRDANTTELKEIANNKMFFIYEFDSLTAIQQEVIRDICSSETCK
SKKADIIFLIDGSESIAPKDFEKMKEFMERMVNQSNIGADKIQIGLLQFSSTPREEFRLN
QYSSKVDMRRAILSVKQMNDGTRTGKALDFTLPFFDSLRGGRASVYQYLIVITDGVSQDN
VAPPAKALRDRNIIIFAIGVGAAQRTQLLEIANDQDKVYHEENFESLQNLEKEIFYEVCS
PQGCGVDLSVGIDISTSSERAQRVLPELLPRLMQQLALLSNISCDAPGRMDPRFRYVIPG
SSGQLVFDSGFEKYNDETIQKFLIHQASVNNRMDTDFLQSLGENTIHLSFAKVKVLLVLT
DGLDEDPQRLRRTSEFLRSRGLSGLLLIGLEGVQKLEELQELEFGRGFAYQQPLSVHLPS
LPRVLLKQLDTIVERTCCQVYAKCYGDDGPRGDPGSLGREGERGLDGLPGHPGEEGDYGQ
RGPRGLPGLRGEEGCPGVRGPKGARGFSGEKGSAGDEGAVGLDGEQGDPGATGSSGEKGN
RGNRGLTGLPGQAGHRGEPGLRGDPGDPGIDNFIQGPKGEKGRRGPQGSSGFHGPQGEAG
SAGPRGSRERHGLPGLKGVRGYAGEPGSQGEPGYPGPQGPRGRQGPPGLFGQKGSLGAQG
NPGPPGPNGSKGQAGPRGMKGELGHAGERGPPGQRGPRGQPGLHGQDGYGHPGRKGKKGE
PGFPGSPGAQGEDGDPGRRGVKGAKGVQGKRGNSGFPGFAGTPGDQGPPGKMGIKGSKGL
ADRTPCEIVDFIRESCPCSKGISRCPAFPSEVVFALDMSNDVSQLDFERMRSILLSLLMK
LDISESNCPTGARVAIVSYNTRTDYLVRFPDHQGKAALLQAARKIPLERSSGSRNLGATM
RFVARHVFKRVRSGLLLRKVAVFFQAGRNYNTTSVGTALLELHAADIVTAVITFTEEHNL
PDALLVDGLKGFHLFTWETERQQDVERLASCTLCYDQCRPAQECGPDAPRPRELDMDLVF
LVDSSQGVSTDVYLGALRLVDSVLKDLEVAAQPGTSWHGARAALVTHTTPGFWPGTGHTP
VLEYFHLTSYGHRTQMQSQVREAAGRPLQGAPALGHALEWTLEKVLLGAVLPRRAQVLFA
IVASETSSWDREKLRTLSQEAKCKGITLFVLAVGPGVGAQELAELAGVASAPLEQHLLRL
EGVSEEEVAYASRFTQAFLSLLKSGMNRYPPPELXEECGGPNRGDTLLQLDAPTKRLSKR
QLGTSAFGYDSEVLKSPDSFLEEEREIKMTSIAQQEAVGNYEMHKSDTEENGQETPAKER
RLGTAYGPCSMAPEEGECQDYRPKMVLQ
NT seq
6927 nt
NT seq
+upstream
nt +downstream
nt
atggggacttggaagacattttggttgatcatctcccttgcagctagtctgggcctcatt
aagtcacaaatgattgtctgcagggaggcctctaagggggatatcgtgtttctggtgcac
accagcatcaacccccagcaagcccgcagtgtgcggaaattcttgtataccttggcaaac
agcttcaatgtcagcaaagacaccatccgtgtgagtctggcccagcacagcgacacacct
gcttctgaattcctgctttctacctaccaccgcaaaggtgacgtgttgagacacatccag
caacttcagtttaagcctgaaggcaataagatgggccaggctctgcagttcatcctagag
caccacttccaggaagaagcggggagccgggcaaaccaaggggtgcctcagatggccctg
gtgatgagcagtggcccagcggaggacaacatccgggaacctgccgaagcgctcaggagg
gcaggaatcttgctgtatgctgttggtgttggagatgcagctcaggctgagctcagagag
atctcgagtattcccaaggataaattcacctttttcgttcccaacttctctagcctgcct
ggcctcgcccagaagctgcggcaagagctctgcagtaccctagcaagggcagctcaaccc
actgggcacaggtctccagtttgcccagaagcatccctggctgacattgtgtttttactg
gacagctcaactagcattggaccccagaacttccagaaagtaaagaacttccttcactct
gttgtcttggggcttgacatcagcaatgaccaggtccaagtgggactagtccagtatagt
gacaacatccaccccgcctttcagctgaaacagtcctctctgaagagcatggtcctggaa
tggatccggaatctctcctacagcactggaggcacaaatacaggaagtgccctagagtac
atcagggccaactacttgactgagatgagtggaagccgggccaaggatggggttcctcag
atagttatcctggtgacagacggggagtcaaatgatgaggtccaggatgcagctgaccag
ctgaaaagagatggagtctttgtgtacgtggtagggatcaacgttcaagatgtccaagag
ttgcaaaaaatagccagtgaaccatttgagaagtttctcttcaacacagaaaacttcagc
atcttggaggagttctcaggaagcctccttcaggctctgtgttcaacagtggagagagag
atgaaaaagtctaccaagacctatgcagatgtggtctttcttattgacacctcacaggaa
acatcacaggccagttttcagtggatgcagaatttcatctctggaattattggcatgctg
gaggttggcaaggacaagtaccagattgggctggctcagtacggtgatcaaggttacact
gagtttttgtttaatacctacaagacccggaatgagatgattacacacatccatgagcac
ttggtgcttcgaggtggctccaggaggacaggccgagcccttcagtttcttcaccagact
ttcttccaggaggcagcaggaagccggatcttccagggtgttccccagtacgcagtggtc
tttacctcaggcaaatctgagggtgaggtcagggatgctgcacagatcctgaggaagaga
ggcgtgaacatcatatctgtgggggtgcaggactctgacaggatggaactggagggcata
gggtctccggtgtttgtggctgacctgcagggagaagacagagtcagacagctattgcag
gatgtgaatgtggtgatccaggggacccaacagcctgatgtcaggatagaggctgcagat
ggagctgctggagcatgtccaactgctgttccagctgacttggtgttccttgttgaggaa
tttagtagggccaggcaatccaatttccaacaagttgtccatttcctgaagaccactgtc
caatctctcaacattgatcctcatgctgtgagaatcagcttggtcttttacagtgaggaa
ccacagctggagttttccctggatacatatcaaaacgctgcccaaatcttacagcatttg
gacaagttgaccttccatggaagaagaggaaggacgaaggccggttctgctttggatttc
ctgaggaatgaagttttcatttcagagaagggtagccggtccaatcaaggcgtacagcag
atagctgtggtcatcatggaaagtccctctgtagacaatgtgtctacccctgcttctcac
ctccgcagggccggggtcaccatctatgcagtgggcatccagcctgcctctgagagtaag
gacctggagaagatttctacatatcctccctggaagcatgccatccgcctagagtccttc
ctgcaactcgtcattgtggaaaacaaacttaaaaacaggctctgccctgagaccgtgagc
agaatctatcctcagaggagttttactctagaaagagcacaagaagattgcgtgcatgtg
gagaaggcggatatttacttccttattgatggatctggcagcatcagaccaatagacttc
attgaaatgaaggcattcatgaaggcggtgataaggatgttccacgttgggcctgacaga
gtgcgatttggagtcgttcagtactcagacaaaattataagccagtttttcctcagccaa
tatgccagtatggcagagctgaggacagccatcgatgacatccagcagggaggaggtggt
accacaaccggagaagccttgagcagaatggccctggtctttgaagacacagccagaacc
agtgttgcccggtacctgatagtcatcaccgatggccagtcttcagacccggtggctgag
gctgcgcagggcttgagagacatgggagtcgacgtttatgccattggagtaagggatgct
aatacgaccgagcttaaggaaatagcaaacaacaagatgtttttcatctatgagtttgac
tccttgacagccattcagcaggaagttattcgggacatctgctcctcagagacctgtaaa
agcaagaaagccgacatcatcttcttgattgacggctcagaatccatcgcccctaaggac
tttgaaaagatgaaggaattcatggagaggatggtgaaccaatctaatattggtgctgat
aaaattcagattggccttctgcagttcagctccactccccgggaagaattcaggctcaac
caatactcctcaaaggtggacatgcgcagagccatcttgagtgtcaaacagatgaacgat
ggtacccgcactgggaaagccttggatttcactctgcctttttttgacagtttaagagga
gggagagccagtgtttatcagtatttgattgtgatcaccgacggggtctcccaggataat
gtagcacccccagctaaagccctcagggacagaaacataattatttttgccattggggta
ggagcggcccaaagaacccagcttttggagattgctaatgaccaggacaaagtgtaccat
gaagaaaattttgagtccctgcaaaacctggaaaaggaaattttttatgaggtctgcagt
ccccaaggatgcggcgtggatctgtctgtcggaattgatatctcaacctcttcagagcga
gctcagcgggttcttcccgagctgctgccccggctgatgcagcagctggccttgctttct
aacatcagctgtgacgctcctggccggatggacccgaggttccgctacgtgattccaggc
tccagtggccagcttgtctttgactcaggctttgagaaatacaatgatgagaccatccag
aagttcttgatacatcaggcttccgtgaacaaccgtatggatacagacttcctccagtcc
ctgggagagaataccatccacctgtcttttgctaaagtgaaggtccttttagtgcttacg
gatggacttgacgaggacccacagaggctgaggagaacgtcagaattccttcgtagcaga
ggactctccggactcctgctcatcggcctggaaggcgtacagaagttagaagagctgcag
gagctggagttcggcagagggttcgcgtaccagcagcctctgagcgtccatctgccgtcc
ctccccagggtcttactgaagcagctcgacacaattgtggagaggacatgctgtcaggtg
tatgccaagtgttatggagatgacgggcctcgaggtgatcctgggagtcttgggagggag
ggagagaggggtttggacggacttcctggccaccctggtgaagagggtgattatggacag
agaggcccccggggtcttcctggactccgaggtgaggaaggatgcccaggtgtgagaggt
cctaagggagcaagaggattttcaggagagaagggcagcgctggtgatgaaggtgctgtc
ggcttagatggagaacagggtgatcctggagctacagggtcgtctggagagaaagggaac
agaggcaacaggggtttgacaggactgcctggacaagctggacatcgtggggagcctggg
ctgaggggagatcctggggatcctggaattgataatttcatccaaggccccaagggagaa
aagggaaggcgtggacctcagggaagttctggtttccatggacctcagggggaagcaggc
tctgcaggacctcgggggtcacgtgaaagacatggcctgccagggttgaagggtgtgcgt
ggatatgctggtgagccgggttcccaaggagagcccgggtatccaggcccacagggaccc
agaggaaggcaaggaccaccgggactttttggccaaaaagggagtctgggtgcccagggg
aaccctgggcctccagggccgaatggctcaaaaggacaagctggacccagaggaatgaag
ggggagcttggccatgcaggagagagaggcccaccaggtcagcgaggaccaagagggcag
cctggtcttcatggtcaagatggttacggtcatccaggaagaaaaggcaagaagggtgaa
cccggattccctggctctcctggtgcacagggagaagatggcgacccaggccgcagagga
gtgaagggggccaagggagtccaagggaagaggggtaattctggctttcctgggtttgct
ggaactccaggtgaccaaggcccaccaggaaaaatgggcatcaagggttcaaaaggtttg
gcagataggacgccttgtgaaattgttgatttcattcgggaaagctgcccgtgttcaaaa
gggatttccagatgcccagcattcccttcagaagtggtctttgccttggacatgtccaac
gatgtctcccagttggactttgagaggatgagaagcattctactgtctctgttgatgaag
ctggacatcagtgagagcaactgtcccactggtgcccgagtggccattgtttcctataac
acgaggacggattacctagtgcgcttcccggaccatcaggggaaagctgccctgctacag
gctgccaggaaaatcccccttgaacggtcatccgggtcccggaaccttggggccaccatg
aggtttgtggcaagacacgtgttcaaacgtgtgcgctcaggcctcctgttaaggaaggtg
gctgtgttcttccaggccggcaggaactacaacacgacctctgtcggcacagccttgctg
gagctccacgcagcagacattgtcacagcagttataaccttcacggaggagcacaacctc
ccggatgccttgctggtggacggactcaagggatttcacttgtttacatgggagacagag
cgccagcaggatgtggaacgcctggccagctgcactctctgctatgaccagtgccgacca
gcccaagaatgcgggccggatgctcccaggccccgggagttggacatggacttggtgttc
ctggtggacagctcccagggagtcagcactgacgtataccttggggctttgcgcctagtg
gattcggtgctgaaggacctggaggtggccgcacagcctggcacatcctggcacggggca
cgtgcagccctggtgacacacacgactccaggcttttggcctggcacgggtcacacccct
gtgcttgagtacttccacctgacctcctacggccaccggacacagatgcaaagtcaggtc
cgggaggctgctgggcgcccgctgcagggagcccctgccctgggccacgccctggagtgg
acgctggagaaagtgcttctgggagccgtgctgccacggagggcacaggtcctcttcgcc
atcgtggccagtgagacaagcagctgggacagagagaagctaaggaccctgtcccaggag
gccaagtgcaagggcatcacactgttcgtgctggctgtgggcccgggagtgggagcccag
gagcttgccgaactggctggagtggccagcgcacccttggagcagcacttgttacgcctg
gagggcgtctcagaggaggaggtagcctatgccagcagattcacacaggccttcctgagc
cttctcaaaagtggaatgaaccggtatccacccccagagctcnacgaggagtgtggaggc
ccaaaccgtggggataccctgctgcagttagatgctcctaccaagaggttgtccaagcgc
cagcttggcacatctgcctttggttatgactcggaagttctcaagtcaccagacagtttt
ctagaagaagagagagaaatcaagatgacatctatagctcagcaggaagcagtgggaaat
tatgaaatgcacaagtcggacactgaagaaaatggtcaagaaacaccagcaaaagaaaga
cgtttgggcactgcctacggtccttgttccatggctcccgaggaaggcgagtgccaggat
tatcgtcctaaaatggtactacaataa
DBGET
integrated database retrieval system
